Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1502 Fragaria x ananassa HOM05D007681 ORTHO05D009734 4.7e-81 304.7 176 100.0
FAN22G1679 Fragaria x ananassa HOM05D007681 ORTHO05D009734 1.3e-75 286.6 176 96.6
FvH4_4g34062 Fragaria vesca HOM05D007681 ORTHO05D009734 2.2e-75 285.8 176 92.0
RcHm_v2.0_Chr4g0443571 Rosa chinensis HOM05D007681 ORTHO05D009734 3.6e-65 251.9 179 83.8
Prupe.1G330200 Prunus persica HOM05D007681 ORTHO05D009734 2.0e-52 209.5 178 71.9
MD13G1021700 Malus domestica HOM05D007681 ORTHO05D009734 3.6e-49 198.7 178 72.5
Cfa014982 Carpinus fangiana HOM05D007681 ORTHO05D009734 3.6e-33 145.6 174 49.4
CiPaw.06G048600 Carya illinoinensis HOM05D007681 ORTHO05D009734 8.9e-32 141.0 174 49.4
CANSAT01G2988 Cannabis sativa HOM05D007681 ORTHO05D009734 1.1e-29 134.0 112 60.7
CsaV3_5G014700 Cucumis sativus L. HOM05D007681 ORTHO05D009734 1.1e-29 134.0 182 48.4
ClCG07G005970 Citrullus lanatus HOM05D007681 ORTHO05D009734 7.1e-29 131.3 177 48.0
Sed0010427 Sechium edule HOM05D007681 ORTHO05D009734 1.0e-27 127.5 179 45.3
Thecc.02G287600 Theobroma cacao HOM05D007681 ORTHO05D009734 8.7e-27 124.4 151 47.7
Gohir.1Z015700 Gossypium hirsutum HOM05D007681 ORTHO05D009734 6.2e-25 118.2 111 59.5
Gohir.A01G150154 Gossypium hirsutum HOM05D007681 ORTHO05D009734 6.2e-25 118.2 111 59.5
Gorai.002G176600 Gossypium raimondii HOM05D007681 ORTHO05D009734 8.1e-25 117.9 111 58.6
Dinv28046 Davidia involucrata HOM05D007681 ORTHO05D009734 4.0e-24 115.5 174 43.7
Gohir.D01G143200 Gossypium hirsutum HOM05D007681 ORTHO05D009734 6.9e-24 114.8 111 57.7
Cpa.g.sc2.238 Carica papaya HOM05D007681 ORTHO05D009734 9.0e-24 114.4 140 47.1
Lsat_1_v5_gn_8_44280 Lactuca sativa HOM05D007681 ORTHO05D009734 1.5e-23 113.6 134 50.7
Migut.L00587 Erythranthe guttata HOM05D007681 ORTHO05D009734 5.8e-23 111.7 126 54.0
Ciclev10016943m.g Citrus clementina HOM05D007681 ORTHO05D009734 7.6e-23 111.3 179 40.8
Actinidia36647 Actinidia chinensis HOM05D007681 ORTHO05D009734 1.3e-22 110.5 139 48.2
Oeu063591.1 Olea europaea HOM05D007681 ORTHO05D009734 1.3e-22 110.5 137 48.9
TWI77G0184 Tripterygium wilfordii HOM05D007681 ORTHO05D009734 2.9e-22 109.4 118 54.2
Eucgr.B02939 Eucalyptus grandis HOM05D007681 ORTHO05D009734 4.9e-22 108.6 131 48.9
EL10Ac1g01492 Beta vulgaris HOM05D007681 ORTHO05D009734 1.4e-21 107.1 132 47.0
ECA233G2077 Erigeron canadensis HOM05D007681 ORTHO05D009734 2.4e-21 106.3 138 48.6
Atru.chr11.647 Acer truncatum HOM05D007681 ORTHO05D009734 4.2e-21 105.5 138 47.1
Sabra10G0080500 Salix brachista HOM05D007681 ORTHO05D009734 5.4e-21 105.1 178 41.6
PSO478G3571 Papaver somniferum HOM05D007681 ORTHO05D009734 1.6e-20 103.6 179 40.2
Glyma.07G166400 Glycine max HOM05D007681 ORTHO05D009734 2.1e-20 103.2 135 43.7
PSO017G3157 Papaver somniferum HOM05D007681 ORTHO05D009734 2.7e-20 102.8 179 40.8
AUR62013520 Chenopodium quinoa HOM05D007681 ORTHO05D009734 3.5e-20 102.4 178 37.1
MELO3C026423.2 Cucumis melo HOM05D007681 ORTHO05D009734 3.5e-20 102.4 144 50.0
Hma1.2p1_0330F.1_g127440 Hydrangea macrophylla HOM05D007681 ORTHO05D009734 3.5e-20 102.4 174 42.5
Lj5g0022624 Lotus japonicus HOM05D007681 ORTHO05D009734 3.5e-20 102.4 125 45.6
Carub.0005s0053 Capsella rubella HOM05D007681 ORTHO05D009734 4.6e-20 102.1 124 47.6
AUR62026755 Chenopodium quinoa HOM05D007681 ORTHO05D009734 4.6e-20 102.1 191 36.6
Lj2g0022739 Lotus japonicus HOM05D007681 ORTHO05D009734 4.6e-20 102.1 125 45.6
MSTRG.7616 Avicennia marina HOM05D007681 ORTHO05D009734 6.0e-20 101.7 132 44.7
TAR629G0584 Trochodendron aralioides HOM05D007681 ORTHO05D009734 6.0e-20 101.7 113 54.9
Potri.010G110100 Populus trichocarpa HOM05D007681 ORTHO05D009734 7.8e-20 101.3 118 48.3
Sp2g13030 Schrenkiella parvula HOM05D007681 ORTHO05D009734 2.3e-19 99.8 136 42.6
Medtr1g031740 Medicago truncatula HOM05D007681 ORTHO05D009734 3.0e-19 99.4 134 44.8
CARHR144140 Cardamine hirsuta HOM05D007681 ORTHO05D009734 3.9e-19 99.0 138 44.2
Thhalv10005039m.g Eutrema salsugineum HOM05D007681 ORTHO05D009734 3.9e-19 99.0 124 44.4
PGR102G0336 Punica granatum HOM05D007681 ORTHO05D009734 3.9e-19 99.0 134 45.5
PGSC0003DMG400015899 Solanum tuberosum HOM05D007681 ORTHO05D009734 3.9e-19 99.0 133 47.4
Lalb_Chr10g0095991 Lupinus albus HOM05D007681 ORTHO05D009734 6.6e-19 98.2 138 44.9
TPR.G36897 Trifolium pratense HOM05D007681 ORTHO05D009734 6.6e-19 98.2 132 45.5
HanXRQChr12g0363581 Helianthus annuus HOM05D007681 ORTHO05D009734 8.7e-19 97.8 139 44.6
Manes.15G131200 Manihot esculenta HOM05D007681 ORTHO05D009734 8.7e-19 97.8 140 42.1
BcaB07g30389 Brassica carinata HOM05D007681 ORTHO05D009734 1.9e-18 96.7 120 44.2
AT2G01590 Arabidopsis thaliana HOM05D007681 ORTHO05D009734 2.5e-18 96.3 137 42.3
BcaC03g17055 Brassica carinata HOM05D007681 ORTHO05D009734 2.5e-18 96.3 120 44.2
BolC2t11054H Brassica oleracea HOM05D007681 ORTHO05D009734 2.5e-18 96.3 120 44.2
C02p49750 Brassica napus HOM05D007681 ORTHO05D009734 3.3e-18 95.9 120 44.2
Solyc05g026570.3 Solanum lycopersicum HOM05D007681 ORTHO05D009734 3.3e-18 95.9 133 45.1
unitig_26.g8951 Utricularia gibba HOM05D007681 ORTHO05D009734 3.3e-18 95.9 132 43.9
Sopen05g023100 Solanum pennellii HOM05D007681 ORTHO05D009734 5.6e-18 95.1 133 45.1
GSVIVG01011705001 Vitis vinifera HOM05D007681 ORTHO05D009734 5.6e-18 95.1 125 47.2
A02p32170 Brassica napus HOM05D007681 ORTHO05D009734 7.3e-18 94.7 126 43.7
AL5G10680 Arabidopsis lyrata HOM05D007681 ORTHO05D009734 9.6e-18 94.4 138 42.8
BraA02t08231Z Brassica rapa HOM05D007681 ORTHO05D009734 1.6e-17 93.6 138 41.3
Psat6g044480 Pisum sativum HOM05D007681 ORTHO05D009734 2.1e-17 93.2 139 42.4
Aa31LG2G8310 Aethionema arabicum HOM05D007681 ORTHO05D009734 3.6e-17 92.4 125 41.6
Aqoxy3G00048 Aquilegia oxysepala HOM05D007681 ORTHO05D009734 8.1e-17 91.3 176 41.5
Nn3g18293 Nelumbo nucifera HOM05D007681 ORTHO05D009734 2.4e-16 89.7 110 50.0
Ca_12590_v3 Cicer arietinum L. HOM05D007681 ORTHO05D009734 9.0e-16 87.8 121 42.1
Rhsim09G0093700 Rhododendron simsii HOM05D007681 ORTHO05D009734 9.0e-16 87.8 104 49.0
Nitab4.5_0001343g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 1.2e-15 87.4 155 42.6
Nitab4.5_0012949g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 1.7e-14 83.6 159 38.4
Phvul.003G022100 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 2.2e-14 83.2 113 39.8
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 2.9e-14 82.8 100 48.0
Ah.01g006360 Amaranthus hybridus HOM05D007681 ORTHO05D009734 1.1e-13 80.9 132 41.7
arahy.Tifrunner.gnm1.ann1.W0FD01 Arachis hypogaea HOM05D007681 ORTHO05D009734 1.1e-13 80.9 113 42.5
Lj6A742G71 Lonicera japonica HOM05D007681 ORTHO05D009734 1.1e-13 80.9 92 50.0
THA.LOC104805073 Tarenaya hassleriana HOM05D007681 ORTHO05D009734 3.2e-13 79.3 142 40.8
arahy.Tifrunner.gnm1.ann1.2VU2GF Arachis hypogaea HOM05D007681 ORTHO05D009734 3.5e-12 75.9 85 48.2
QL03p033908 Quercus lobata HOM05D007681 ORTHO05D009734 3.5e-12 75.9 75 50.7
Nitab4.5_0000018g0170 Nicotiana tabacum HOM05D007681 ORTHO05D009734 1.0e-11 74.3 147 40.8
Peaxi162Scf00376g00013 Petunia axillaris HOM05D007681 ORTHO05D009734 5.1e-11 72.0 135 36.3
MBI16_g06252_MAGBIO Magnolia biondii HOM05D007681 ORTHO05D009734 4.3e-10 68.9 77 48.1
Os09g0306650 Oryza sativa ssp. japonica HOM05D007681 ORTHO05D009734 2.9e-06 56.2 125 34.4
Phvul.005G062000 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 3.8e-06 55.8 77 41.6
Zm00001eb309450 Zea mays HOM05D007681 ORTHO05D009734 4.9e-06 55.5 126 31.7


User provided reference genes

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