Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 3.5e-71 271.6 140 100.0
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.3e-54 215.7 112 99.1
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 1.4e-51 206.5 112 94.6
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 1.8e-51 206.1 112 94.6
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 3.1e-51 205.3 111 95.5
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 6.8e-51 204.1 112 94.6
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.4e-50 201.4 111 93.7
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 2.1e-47 192.6 112 87.5
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 1.5e-45 186.4 112 84.8
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 1.6e-44 183.0 111 82.0
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 8.9e-43 177.2 112 78.6
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 2.2e-41 172.6 112 75.9
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 5.4e-40 167.9 112 75.0
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 7.1e-40 167.5 112 74.1
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 1.6e-39 166.4 112 75.0
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 3.5e-39 165.2 112 73.2
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 1.7e-38 162.9 112 74.1
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 3.0e-38 162.2 112 74.1
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 3.9e-38 161.8 112 72.3
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 3.9e-38 161.8 112 69.6
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 8.7e-38 160.6 112 72.3
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 1.1e-37 160.2 112 72.3
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 1.1e-37 160.2 112 72.3
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.1e-37 160.2 113 71.7
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 1.1e-37 160.2 112 70.5
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 1.1e-37 160.2 112 68.8
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 1.5e-37 159.8 112 69.6
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 1.5e-37 159.8 112 70.5
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 1.9e-37 159.5 112 72.3
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 2.5e-37 159.1 111 70.3
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 2.5e-37 159.1 112 69.6
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 2.5e-37 159.1 113 71.7
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 2.5e-37 159.1 112 71.4
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 2.5e-37 159.1 112 72.3
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 4.3e-37 158.3 112 69.6
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 5.6e-37 157.9 111 69.4
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 5.6e-37 157.9 111 70.3
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 2.8e-36 155.6 112 68.8
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 3.6e-36 155.2 113 69.9
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 6.2e-36 154.5 113 69.9
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 8.1e-36 154.1 112 63.4
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 8.1e-36 154.1 112 67.9
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 2.4e-35 152.5 112 67.9
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 2.4e-35 152.5 107 70.1
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 5.3e-35 151.4 112 64.3
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 5.3e-35 151.4 112 64.3
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 5.3e-35 151.4 112 67.9
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 6.9e-35 151.0 112 66.1
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 9.0e-35 150.6 112 68.8
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 1.2e-34 150.2 112 67.0
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 1.2e-34 150.2 117 65.8
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 2.0e-34 149.4 112 67.0
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 2.0e-34 149.4 107 70.1
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 2.0e-34 149.4 119 65.5
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 3.4e-34 148.7 112 67.0
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 4.5e-34 148.3 112 66.1
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 4.5e-34 148.3 111 64.9
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 9.9e-34 147.1 113 67.3
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 9.9e-34 147.1 112 66.1
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 2.9e-33 145.6 113 64.6
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 3.8e-33 145.2 112 63.4
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 6.4e-33 144.4 112 64.3
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 1.4e-32 143.3 112 63.4
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.9e-32 142.9 108 65.7
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 4.2e-32 141.7 112 60.7
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 9.3e-32 140.6 112 63.4
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 2.1e-31 139.4 110 63.6
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 2.7e-31 139.0 113 62.8
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 2.7e-31 139.0 112 62.5
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 3.5e-31 138.7 112 63.4
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 7.9e-31 137.5 143 54.5
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 2.3e-30 136.0 116 60.3
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 6.7e-30 134.4 112 61.6
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.1e-29 133.7 112 60.7
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.9e-29 132.9 109 64.2
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.5e-29 132.5 112 61.6
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 5.6e-29 131.3 112 57.1
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 2.4e-27 125.9 112 59.8
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 2.4e-27 125.9 88 72.7
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 2.6e-26 122.5 112 55.4
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 2.6e-26 122.5 112 54.5
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 1.3e-22 110.2 113 50.4
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.8e-19 99.8 148 38.5
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.1e-19 99.0 141 39.0
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 3.4e-18 95.5 125 44.8
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 2.2e-17 92.8 110 46.4
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 7.1e-16 87.8 127 40.2
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 9.3e-16 87.4 127 39.4
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.1e-15 86.3 131 37.4
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 4.6e-15 85.1 114 38.6
RcHm_v2.0_Chr3g0493761 Rosa chinensis HOM05D005467 ORTHO05D006523 4.6e-15 85.1 49 91.8
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 4.6e-15 85.1 49 91.8
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 1.3e-14 83.6 131 38.2
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.0e-14 82.4 135 34.8
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.5e-13 80.1 66 56.1
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 1.5e-13 80.1 131 35.9
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.9e-13 79.7 72 51.4
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 1.9e-13 79.7 75 53.3
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.9e-13 79.7 117 38.5
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.5e-13 79.3 72 51.4
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 9.6e-13 77.4 123 35.8
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 4.8e-12 75.1 52 73.1
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 3.1e-11 72.4 113 41.6
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.1e-11 72.4 131 35.1
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 3.4e-10 68.9 108 40.7
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 5.9e-10 68.2 116 35.3
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.2e-09 66.2 74 44.6
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 5.0e-09 65.1 112 34.8
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 2.5e-08 62.8 82 39.0
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.1e-07 59.7 54 59.3
Nitab4.5_0000688g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.8e-06 56.6 123 35.8
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 6.7e-06 54.7 87 41.4


User provided reference genes

Program Settings