Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 1.6e-214 749.2 392 100.0
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 2.0e-196 689.1 392 92.6
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 2.7e-182 642.1 393 83.0
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.5e-180 636.3 396 80.8
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 5.7e-180 634.4 392 80.9
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 1.3e-179 633.3 395 81.5
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 2.8e-179 632.1 393 81.2
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 2.8e-179 632.1 377 83.3
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 8.3e-179 630.6 392 80.6
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.1e-178 630.2 397 80.4
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 1.6e-177 626.3 347 86.7
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 2.7e-177 625.5 385 81.6
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 3.5e-177 625.2 399 78.7
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 1.3e-176 623.2 346 85.5
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 1.3e-176 623.2 346 85.5
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 1.7e-176 622.9 350 86.0
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 3.8e-176 621.7 350 85.7
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 1.1e-175 620.2 386 79.5
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 1.5e-175 619.8 391 78.3
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 1.9e-175 619.4 398 78.1
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 3.3e-175 618.6 394 78.9
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 4.3e-175 618.2 375 81.9
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 4.3e-175 618.2 375 81.9
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 4.3e-175 618.2 392 79.1
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 9.5e-175 617.1 381 80.1
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 9.5e-175 617.1 391 79.5
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 1.2e-174 616.7 381 80.1
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 2.1e-174 615.9 381 80.1
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 2.8e-174 615.5 398 76.9
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 3.6e-174 615.1 385 79.5
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 3.6e-174 615.1 379 80.7
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 6.1e-174 614.4 401 77.6
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 6.1e-174 614.4 382 79.6
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 8.0e-174 614.0 381 79.5
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 8.0e-174 614.0 350 84.0
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 8.0e-174 614.0 344 86.0
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 8.0e-174 614.0 386 78.8
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 1.8e-173 612.8 391 78.8
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 1.8e-173 612.8 387 78.8
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 3.0e-173 612.1 381 79.0
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 5.2e-173 611.3 390 78.7
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 6.8e-173 610.9 397 78.1
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 8.9e-173 610.5 390 78.5
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 8.9e-173 610.5 381 78.2
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 8.9e-173 610.5 348 84.2
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 1.2e-172 610.1 350 84.6
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 2.0e-172 609.4 388 78.4
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 3.4e-172 608.6 389 78.4
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 4.4e-172 608.2 390 77.9
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 5.7e-172 607.8 383 76.8
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 1.3e-171 606.7 346 85.3
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 1.7e-171 606.3 350 81.7
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 2.9e-171 605.5 393 77.9
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 2.9e-171 605.5 393 77.9
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 2.9e-171 605.5 392 77.3
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 2.9e-171 605.5 400 77.2
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 4.9e-171 604.7 350 84.6
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 6.4e-171 604.4 401 76.8
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 6.4e-171 604.4 389 77.6
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 8.3e-171 604.0 350 83.7
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 1.1e-170 603.6 331 87.3
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 1.1e-170 603.6 398 75.6
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 1.8e-170 602.8 357 80.4
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 4.1e-170 601.7 397 76.6
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 4.1e-170 601.7 348 81.9
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 9.2e-170 600.5 375 77.9
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 1.2e-169 600.1 374 78.6
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 1.6e-169 599.7 399 75.4
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 2.0e-169 599.4 348 81.6
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 2.7e-169 599.0 348 82.5
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 4.6e-169 598.2 352 83.8
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 4.6e-169 598.2 346 83.2
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 5.9e-169 597.8 415 73.0
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 1.3e-168 596.7 374 78.6
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 1.3e-168 596.7 374 78.6
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 1.7e-168 596.3 374 78.1
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 2.3e-168 595.9 330 86.4
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 3.0e-168 595.5 350 82.9
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 5.0e-168 594.7 374 77.0
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 8.6e-168 594.0 378 76.5
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 8.6e-168 594.0 374 78.3
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 8.6e-168 594.0 338 84.0
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 1.5e-167 593.2 345 82.3
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 4.3e-167 591.7 339 83.2
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 5.6e-167 591.3 399 74.9
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 7.3e-167 590.9 378 77.2
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 9.5e-167 590.5 346 83.5
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 1.2e-166 590.1 378 75.7
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 1.6e-166 589.7 343 83.4
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 1.6e-166 589.7 373 76.1
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 1.8e-165 586.3 350 82.0
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 3.4e-164 582.0 331 82.5
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 2.0e-161 572.8 401 73.1
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 3.9e-160 568.5 345 79.4
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 8.6e-160 567.4 329 82.1
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 1.5e-159 566.6 350 79.1
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 1.1e-157 560.5 388 74.7
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 6.8e-157 557.8 337 78.0
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 9.8e-156 553.9 350 77.1
FvH4_4g11460 Fragaria vesca HOM05D005615 ORTHO05D007558 8.6e-152 540.8 289 97.2
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 1.5e-151 540.0 315 83.5
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 7.3e-151 537.7 404 68.3
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 8.1e-150 534.3 379 72.8
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 5.2e-149 531.6 372 73.1
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 1.4e-146 523.5 315 77.8
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 6.8e-141 504.6 323 72.8
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 4.3e-135 485.3 266 91.7
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 9.0e-133 477.6 350 68.6
Cpa.g.sc71.17 Carica papaya HOM05D005615 ORTHO05D007558 2.1e-126 456.4 292 77.1
HPP92_002777 Vanilla planifolia HOM05D005615 ORTHO05D007558 1.2e-121 440.7 248 83.1
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 1.8e-120 436.8 261 82.4
FAN07G1681 Fragaria x ananassa HOM05D005615 ORTHO05D007558 6.0e-113 411.8 242 90.9
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 1.0e-112 411.0 299 69.6
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 8.2e-110 401.4 320 62.8
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 2.9e-107 392.9 331 59.2
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 3.0e-104 382.9 217 86.6
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 7.9e-97 358.2 207 83.6
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 5.7e-95 352.1 225 78.2
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 5.7e-79 298.9 298 51.0
vmacro00603 Vaccinium macrocarpon HOM05D005615 ORTHO05D007558 4.0e-72 276.2 234 61.1
AL3G36550 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 1.4e-53 214.5 121 84.3
CBR_g54828 Chara braunii HOM05D005615 ORTHO05D007558 6.6e-51 205.7 129 71.3
AL4G42060 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 9.5e-50 201.8 209 54.5
Actinidia27060 Actinidia chinensis HOM05D005615 ORTHO05D007558 1.6e-44 184.5 97 89.7
CBR_g54834 Chara braunii HOM05D005615 ORTHO05D007558 4.0e-40 169.9 104 76.9
Cpa.g.sc71.16 Carica papaya HOM05D005615 ORTHO05D007558 5.6e-34 149.4 100 79.0
CBR_g54836 Chara braunii HOM05D005615 ORTHO05D000002 4.7e-33 146.4 99 72.7
HPP92_002776 Vanilla planifolia HOM05D005615 ORTHO05D007558 1.2e-28 131.7 84 81.0
Psat3g051440 Pisum sativum HOM05D005615 ORTHO05D031631 5.1e-27 126.3 78 79.5
Cpa.g.c45785 Carica papaya HOM05D005615 ORTHO05D007558 6.2e-25 119.4 60 91.7
CDE04G1318 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 3.1e-24 117.1 75 77.3
Eucgr.A00259 Eucalyptus grandis HOM05D005615 ORTHO05D007558 2.4e-21 107.5 71 70.4
Zm00001eb285620 Zea mays HOM05D001443 ORTHO05D001352 1.6e-20 104.8 126 50.8
SalBow8G4084 Salvia bowleyana HOM05D005615 ORTHO05D007558 1.0e-19 102.1 68 75.0


User provided reference genes

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