Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1394 Fragaria x ananassa HOM05D026880 ORTHO05D000074 7.9e-79 297.0 142 100.0
FvH4_4g05011 Fragaria vesca HOM05D000151 ORTHO05D000074 8.5e-57 223.8 110 97.3
FAN22G0114 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.0e-45 186.0 93 96.8
RcHm_v2.0_Chr4g0395901 Rosa chinensis HOM05D026880 ORTHO05D029589 1.8e-14 83.2 114 42.1
MD16G1228400 Malus domestica HOM05D000151 ORTHO05D000074 2.3e-14 82.8 168 35.7
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 5.2e-14 81.6 141 36.9
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 5.4e-11 71.6 140 37.9
RcHm_v2.0_Chr4g0395201 Rosa chinensis HOM05D000151 ORTHO05D000074 7.0e-11 71.2 125 36.0
FAN17G1827 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.0e-10 69.7 116 37.9
FAN22G1568 Fragaria x ananassa HOM05D026880 ORTHO05D029589 2.0e-10 69.7 117 35.0
Haze_25744 Corylus avellana HOM05D015779 ORTHO05D000074 3.5e-10 68.9 140 34.3
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.5e-10 68.6 124 37.1
FvH4_4g04480 Fragaria vesca HOM05D000151 ORTHO05D000074 5.9e-10 68.2 116 37.1
FAN12G2073 Fragaria x ananassa HOM05D004442 ORTHO05D002066 5.9e-10 68.2 116 37.1
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.0e-09 67.4 117 32.5
Cfa016448 Carpinus fangiana HOM05D015779 ORTHO05D000074 1.0e-09 67.4 105 41.9
Haze_25743 Corylus avellana HOM05D015779 ORTHO05D000074 1.0e-09 67.4 119 37.0
FAN12G3235 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.3e-09 67.0 126 34.9
Cfa003245 Carpinus fangiana HOM05D015779 ORTHO05D000074 3.8e-09 65.5 91 45.1
Cfa003248 Carpinus fangiana HOM05D015779 ORTHO05D000074 3.8e-09 65.5 91 45.1
FvH4_4g26310 Fragaria vesca HOM05D000151 ORTHO05D000074 3.8e-09 65.5 126 34.9
Aqoxy7G01775 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.0e-09 65.1 119 31.1
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 5.0e-09 65.1 125 32.0
Prupe.6G285500 Prunus persica HOM05D000151 ORTHO05D000074 5.0e-09 65.1 128 35.2
Cfa016450 Carpinus fangiana HOM05D015779 ORTHO05D000074 6.6e-09 64.7 92 43.5
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.6e-09 64.3 108 36.1
Dinv38940 Davidia involucrata HOM05D000151 ORTHO05D000074 8.6e-09 64.3 116 35.3
Actinidia33181 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.1e-08 63.9 92 35.9
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-08 63.9 119 31.1
Glyma.04G019900 Glycine max HOM05D000151 ORTHO05D000074 1.1e-08 63.9 122 33.6
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 2.5e-08 62.8 128 32.0
FvH4_4g26320 Fragaria vesca HOM05D000151 ORTHO05D000074 2.5e-08 62.8 126 31.7
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.3e-08 62.4 113 31.9
RcHm_v2.0_Chr6g0254481 Rosa chinensis HOM05D000151 ORTHO05D000074 3.3e-08 62.4 108 36.1
FvH4_4g05013 Fragaria vesca HOM05D026880 ORTHO05D029589 4.3e-08 62.0 97 37.1
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 5.6e-08 61.6 134 31.3
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 5.6e-08 61.6 134 31.3
RcHm_v2.0_Chr1g0339581 Rosa chinensis HOM05D000151 ORTHO05D000074 5.6e-08 61.6 139 30.2
RcHm_v2.0_Chr4g0433901 Rosa chinensis HOM05D000151 ORTHO05D000074 7.3e-08 61.2 116 35.3
TAR636G3671 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.3e-08 61.2 131 31.3
Atru.chr13.193 Acer truncatum HOM05D000151 ORTHO05D000074 9.5e-08 60.8 115 33.9
Rhsim06G0010000 Rhododendron simsii HOM05D000151 ORTHO05D000074 9.5e-08 60.8 110 32.7
TAR636G1293 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.5e-08 60.8 127 30.7
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.2e-07 60.5 112 33.9
FvH4_7g10560 Fragaria vesca HOM05D000151 ORTHO05D000074 1.6e-07 60.1 119 34.5
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.6e-07 60.1 111 29.7
Thecc.04G266500 Theobroma cacao HOM05D000151 ORTHO05D000074 1.6e-07 60.1 130 28.5
Aqoxy7G01870 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.1e-07 59.7 121 32.2
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 2.1e-07 59.7 120 29.2
Dinv38964 Davidia involucrata HOM05D000151 ORTHO05D000074 2.8e-07 59.3 111 32.4
TAR636G0252 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.7e-07 58.5 131 29.8
TAR636G0632 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.1e-07 58.2 131 29.0
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.0e-07 57.8 135 28.1
Dinv35548 Davidia involucrata HOM05D000151 ORTHO05D000074 8.0e-07 57.8 81 42.0
Nn1g04501 Nelumbo nucifera HOM05D000151 ORTHO05D000074 8.0e-07 57.8 129 31.0
Prupe.1G358000 Prunus persica HOM05D000151 ORTHO05D000074 8.0e-07 57.8 89 39.3
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 8.0e-07 57.8 111 34.2
DCAR_020403 Daucus carota HOM05D001386 ORTHO05D000074 1.0e-06 57.4 106 36.8
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.0e-06 57.4 133 29.3
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-06 57.4 129 30.2
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-06 57.0 119 29.4
Aqoxy7G00556 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-06 57.0 84 33.3
Aqoxy7G03306 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-06 57.0 114 29.8
Dinv38968 Davidia involucrata HOM05D000151 ORTHO05D000074 1.4e-06 57.0 125 32.8
FvH4_2g25110 Fragaria vesca HOM05D000151 ORTHO05D000074 1.4e-06 57.0 102 32.4
Aqoxy2G00256 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-06 56.6 127 33.1
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-06 56.6 113 29.2
Dinv40802 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-06 56.6 124 33.9
Dinv37496 Davidia involucrata HOM05D000151 ORTHO05D000074 2.3e-06 56.2 112 31.2
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 2.3e-06 56.2 103 35.0
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.3e-06 56.2 95 35.8
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 3.0e-06 55.8 114 31.6
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 3.0e-06 55.8 123 30.9
Dinv12037 Davidia involucrata HOM05D000151 ORTHO05D000074 3.0e-06 55.8 113 28.3
FAN22G1059 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.0e-06 55.8 78 35.9
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 3.0e-06 55.8 89 36.0
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 4.0e-06 55.5 131 29.0
Dinv38984 Davidia involucrata HOM05D000151 ORTHO05D000074 4.0e-06 55.5 115 33.0
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.0e-06 55.5 100 40.0
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 4.0e-06 55.5 111 30.6
Rhsim04G0081100 Rhododendron simsii HOM05D000151 ORTHO05D000074 4.0e-06 55.5 135 25.9
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 5.2e-06 55.1 111 30.6
FAN24G2321 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.2e-06 55.1 100 32.0
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 5.2e-06 55.1 100 35.0
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 5.2e-06 55.1 100 39.0
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.2e-06 55.1 106 34.9
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.2e-06 55.1 130 29.2
Aqoxy3G01208 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.8e-06 54.7 108 31.5
Dinv38965 Davidia involucrata HOM05D000151 ORTHO05D000074 6.8e-06 54.7 83 39.8
FAN20G1528 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.8e-06 54.7 83 42.2
TPR.G38135 Trifolium pratense HOM05D000151 ORTHO05D000074 6.8e-06 54.7 114 32.5
TWI31G0065 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.8e-06 54.7 82 37.8
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.8e-06 54.7 93 34.4
Aqoxy7G00538 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.9e-06 54.3 84 31.0
Haze_18850 Corylus avellana HOM05D000151 ORTHO05D000074 8.9e-06 54.3 113 32.7
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 8.9e-06 54.3 83 39.8
Duzib116G0495 Durio zibethinus HOM05D000151 ORTHO05D000074 8.9e-06 54.3 115 32.2
FAN15G0419 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.9e-06 54.3 102 32.4
Lj2C500G3 Lonicera japonica HOM05D000151 ORTHO05D000074 8.9e-06 54.3 120 30.0
MBI06_g17230_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 8.9e-06 54.3 87 36.8
Manes.18G008400 Manihot esculenta HOM05D000151 ORTHO05D000074 8.9e-06 54.3 94 34.0
Nitab4.5_0003280g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 8.9e-06 54.3 108 33.3
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 8.9e-06 54.3 111 29.7
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.9e-06 54.3 86 37.2


User provided reference genes

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