Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1313 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-83 312.0 156 100.0
FvH4_1g22022 Fragaria vesca HOM05D002480 ORTHO05D003145 3.3e-54 215.3 154 69.5
FAN12G1965 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.3e-54 214.9 154 68.8
FvH4_2g07601 Fragaria vesca HOM05D002480 ORTHO05D003145 5.3e-52 208.0 154 68.2
FvH4_4g05732 Fragaria vesca HOM05D002480 ORTHO05D003145 1.9e-49 199.5 144 70.1
FAN08G1660 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.3e-49 197.2 123 81.3
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 1.0e-47 193.7 154 63.6
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.2e-45 184.1 153 58.8
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-44 183.3 153 58.8
FAN05G5003 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-40 170.2 142 58.5
FAN15G1816 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-40 169.5 154 57.1
FAN14G0992 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.7e-40 169.1 153 56.9
FAN09G2457 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.3e-38 161.8 149 53.7
FvH4_7g10071 Fragaria vesca HOM05D002480 ORTHO05D003145 9.0e-36 154.1 154 57.1
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.7e-35 151.0 149 55.0
FvH4_2g24951 Fragaria vesca HOM05D002480 ORTHO05D003145 4.2e-33 145.2 103 65.0
FAN18G1519 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-32 143.3 143 57.3
FAN20G0719 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.6e-32 142.1 154 52.6
FvH4_4g13621 Fragaria vesca HOM05D002480 ORTHO05D003145 1.1e-28 130.6 154 51.3
FvH4_6g28831 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-28 130.2 112 57.1
FAN13G1471 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.1e-28 129.0 151 47.7
FAN05G4151 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-28 128.3 117 50.4
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.1e-28 127.5 155 44.5
FAN28G0569 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-27 126.7 155 44.5
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-27 126.3 155 44.5
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.4e-27 125.6 155 44.5
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.7e-27 124.4 155 43.9
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-26 124.0 155 43.9
FAN11G3668 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-26 123.6 155 43.9
FAN02G1343 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-26 123.2 155 43.9
FAN18G3922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.5e-26 120.9 155 43.2
FAN05G0708 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.2e-25 119.0 161 46.6
FAN03G2236 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.5e-25 118.2 155 41.9
FvH4_5g30551 Fragaria vesca HOM05D002480 ORTHO05D003145 7.2e-25 117.9 150 46.7
FAN19G0554 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.6e-24 116.7 151 44.4
FAN15G2272 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.7e-24 115.2 154 42.9
FAN04G3005 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.9e-23 112.1 99 52.5
FAN28G0509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.8e-23 110.9 140 45.0
FAN03G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-22 109.4 155 41.3
FAN14G4423 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.4e-22 108.6 77 71.4
FvH4_2g04010 Fragaria vesca HOM05D002480 ORTHO05D003145 6.3e-21 104.8 154 42.9
FvH4_5g30200 Fragaria vesca HOM05D002480 ORTHO05D003145 6.3e-21 104.8 103 54.4
FvH4_1g20081 Fragaria vesca HOM05D002480 ORTHO05D003145 2.4e-20 102.8 156 41.7
FAN10G2799 Fragaria x ananassa HOM05D000125 ORTHO05D000120 3.1e-20 102.4 81 58.0
FAN04G1189 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.1e-20 102.1 152 40.8
FAN24G3444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.1e-20 102.1 67 70.1
FAN18G1228 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-19 99.8 102 52.0
FAN05G0789 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-19 99.0 92 56.5
FAN25G1938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.9e-19 98.2 154 39.6
FAN18G1980 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-18 97.4 80 65.0
FvH4_4g13551 Fragaria vesca HOM05D002480 ORTHO05D003145 1.3e-18 97.1 153 35.9
FAN15G1902 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-18 96.7 154 39.0
FvH4_7g18780 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-17 93.6 82 58.5
FAN11G1368 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-17 93.6 149 36.9
FAN14G5134 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-16 89.7 102 45.1
FAN15G0005 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.1e-16 89.7 145 35.9
FvH4_4g26661 Fragaria vesca HOM05D002480 ORTHO05D003145 6.1e-16 88.2 120 39.2
FAN10G3390 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.1e-16 88.2 155 34.8
FAN02G3493 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-15 87.4 77 61.0
FAN06G4257 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-15 87.4 155 35.5
FAN14G1490 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-15 87.4 161 39.1
FAN16G1534 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-15 86.7 143 36.4
FAN26G0220 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-15 86.7 81 53.1
FvH4_6g41261 Fragaria vesca HOM05D002480 ORTHO05D003145 2.3e-15 86.3 163 38.0
FAN26G2394 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-15 86.3 105 43.8
FvH4_6g03011 Fragaria vesca HOM05D008430 ORTHO05D010682 3.0e-15 85.9 145 35.9
FAN06G5011 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.0e-15 85.9 81 51.9
FAN23G1644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.9e-15 85.5 81 51.9
FAN04G2250 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-15 85.1 145 37.9
FAN12G0049 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-15 85.1 81 51.9
FvH4_7g16371 Fragaria vesca HOM05D008430 ORTHO05D010682 8.8e-15 84.3 140 35.7
FAN06G0233 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.1e-14 84.0 124 38.7
FvH4_5g05871 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-14 83.6 110 36.4
FvH4_3g34441 Fragaria vesca HOM05D002480 ORTHO05D003145 2.0e-14 83.2 130 37.7
FAN16G3475 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-14 83.2 137 38.7
FAN05G4362 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-14 82.8 81 50.6
FAN24G1596 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-14 82.8 79 53.2
FAN06G0355 Fragaria x ananassa HOM05D008430 ORTHO05D010682 3.3e-14 82.4 140 35.7
FAN13G0055 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.7e-14 81.6 147 36.7
FvH4_7g00030 Fragaria vesca HOM05D002480 ORTHO05D003145 7.4e-14 81.3 113 38.9
FAN18G3689 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-13 80.1 59 69.5
FAN12G3387 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.2e-13 79.7 59 71.2
FAN21G1308 Fragaria x ananassa HOM05D008430 ORTHO05D010682 4.8e-13 78.6 112 38.4
FAN15G2755 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.2e-13 77.8 172 33.7
FAN18G3828 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.2e-13 77.8 65 55.4
FvH4_5g36132 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-12 77.0 74 59.5
FAN02G1315 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-12 77.0 77 42.9
FAN02G4154 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-12 77.0 77 42.9
FAN09G0095 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-12 76.6 155 36.1
FAN06G2080 Fragaria x ananassa HOM05D000125 ORTHO05D000120 2.4e-12 76.3 70 58.6
FAN14G5285 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.4e-12 76.3 145 33.8
FAN10G3968 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.1e-12 75.5 116 37.9
FvH4_6g10711 Fragaria vesca HOM05D008430 ORTHO05D010682 7.0e-12 74.7 118 38.1
FAN12G0852 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-11 73.9 68 60.3
FAN05G3338 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-11 73.2 77 40.3
FAN21G2625 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-11 73.2 53 67.9
FvH4_2g18601 Fragaria vesca HOM05D002480 ORTHO05D003145 3.5e-11 72.4 43 81.4
FAN08G1598 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.5e-11 72.4 78 53.8
FAN05G3149 Fragaria x ananassa HOM05D002959 ORTHO05D003237 4.5e-11 72.0 81 43.2
FAN14G3390 Fragaria x ananassa HOM05D008430 ORTHO05D010682 4.5e-11 72.0 118 36.4
FAN21G1872 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.5e-11 72.0 136 37.5
FAN05G3618 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.9e-11 71.6 116 33.6
FAN20G1631 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.7e-11 71.2 81 43.2
FAN21G2924 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.7e-11 71.2 46 76.1
FAN18G2225 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-10 70.9 75 42.7
FAN12G3593 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-10 70.5 68 57.4
FvH4_4g12651 Fragaria vesca HOM05D008430 ORTHO05D010682 3.8e-10 68.9 82 42.7
FAN07G0392 Fragaria x ananassa HOM05D008119 ORTHO05D010214 5.0e-10 68.6 122 31.1
FAN15G0584 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.0e-10 68.6 132 37.9
FvH4_6g32661 Fragaria vesca HOM05D008430 ORTHO05D010682 6.5e-10 68.2 119 31.9
FAN12G2566 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-09 67.4 55 60.0
FAN08G2207 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-09 67.0 75 42.7
FAN21G2545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-09 67.0 154 32.5
FAN05G3376 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.2e-09 65.9 107 33.6
FAN14G5082 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.2e-09 65.9 100 38.0
FvH4_1g10041 Fragaria vesca HOM05D002480 ORTHO05D003145 4.2e-09 65.5 72 36.1
FAN01G2328 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.2e-09 65.5 55 60.0
FvH4_4g07081 Fragaria vesca HOM05D008119 ORTHO05D010214 5.5e-09 65.1 105 29.5
FAN02G0444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.5e-09 65.1 113 32.7
RcHm_v2.0_Chr5g0032121 Rosa chinensis HOM05D008430 ORTHO05D011995 1.6e-08 63.5 82 37.8
FAN12G2038 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-08 63.2 78 43.6
FAN25G0390 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.7e-08 62.8 116 29.3
FvH4_6g07931 Fragaria vesca HOM05D002480 ORTHO05D003145 3.6e-08 62.4 54 55.6
FAN08G3242 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.6e-08 62.4 44 65.9
FAN11G3237 Fragaria x ananassa HOM05D002480 ORTHO05D045681 3.6e-08 62.4 95 40.0
FAN13G1521 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.7e-08 62.0 75 37.3
FAN16G1550 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.7e-08 62.0 76 43.4
QL05p080911 Quercus lobata HOM05D000774 ORTHO05D000602 6.1e-08 61.6 120 30.0
Lj2g0016089 Lotus japonicus HOM05D000003 ORTHO05D000126 1.0e-07 60.8 102 26.5
QL03p061024 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-07 60.8 113 28.3
Sabra02G0183300 Salix brachista HOM05D000971 ORTHO05D000901 1.0e-07 60.8 127 29.1
FAN24G0841 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.4e-07 60.5 145 32.4
FAN07G2346 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.8e-07 60.1 96 32.3
FAN05G0293 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-07 59.7 52 55.8
QL02p008707 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-07 59.7 118 29.7
FAN02G4274 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.0e-07 59.3 101 33.7
RcHm_v2.0_Chr1g0347111 Rosa chinensis HOM05D063847 ORTHO05D045559 3.0e-07 59.3 107 32.7
Sabra16G0124200 Salix brachista HOM05D000003 ORTHO05D000007 3.0e-07 59.3 97 30.9
FAN12G1540 Fragaria x ananassa HOM05D003375 ORTHO05D004719 4.0e-07 58.9 83 33.7
Lj4g0001415 Lotus japonicus HOM05D000003 ORTHO05D000126 4.0e-07 58.9 120 28.3
QL02p016877 Quercus lobata HOM05D000003 ORTHO05D000126 4.0e-07 58.9 112 25.0
Aqoxy3G03029 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 5.2e-07 58.5 88 28.4
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 5.2e-07 58.5 119 27.7
FvH4_5g30830 Fragaria vesca HOM05D002480 ORTHO05D003145 6.7e-07 58.2 70 38.6
FAN13G2412 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.7e-07 58.2 69 39.1
FAN17G1610 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.7e-07 58.2 74 35.1
FAN18G1129 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.7e-07 58.2 121 30.6
Sabra04G0111000 Salix brachista HOM05D000003 ORTHO05D000007 6.7e-07 58.2 96 30.2
BcaC04g21545 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-07 57.8 116 28.4
FvH4_1g28860 Fragaria vesca HOM05D017403 ORTHO05D046214 8.8e-07 57.8 76 38.2
Lj6g0022847 Lotus japonicus HOM05D000003 ORTHO05D000126 8.8e-07 57.8 120 27.5
BcaC03g16224 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-06 57.4 116 28.4
Lj5g0023610 Lotus japonicus HOM05D000003 ORTHO05D000126 1.2e-06 57.4 141 27.7
QL06p031816 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 57.4 106 30.2
FvH4_3g10980 Fragaria vesca HOM05D003375 ORTHO05D004719 1.5e-06 57.0 95 32.6
Lj4g0002418 Lotus japonicus HOM05D000003 ORTHO05D000126 1.5e-06 57.0 97 32.0
QL04p035086 Quercus lobata HOM05D000003 ORTHO05D000126 1.5e-06 57.0 91 33.0
QL93p0120_0010 Quercus lobata HOM05D000003 ORTHO05D000126 1.5e-06 57.0 118 28.8
Sabra03G0065500 Salix brachista HOM05D000003 ORTHO05D000007 1.5e-06 57.0 98 28.6
CSS0007463 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-06 56.6 96 26.0
CSS0025791 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-06 56.6 96 26.0
CSS0041095 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-06 56.6 96 26.0
FAN13G3053 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-06 56.6 78 39.7
Aqoxy3G01613 Aquilegia oxysepala HOM05D003167 ORTHO05D000007 2.6e-06 56.2 95 26.3
CSS0003220 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-06 56.2 96 26.0
FAN18G2574 Fragaria x ananassa HOM05D008973 ORTHO05D010682 2.6e-06 56.2 91 31.9
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-06 56.2 91 33.0
QL04p035245 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-06 56.2 91 34.1
Aqoxy6G02383 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 3.3e-06 55.8 89 28.1
BcaC04g20748 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-06 55.8 120 28.3
FAN06G0850 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.3e-06 55.8 145 28.3
QL04p035145 Quercus lobata HOM05D000003 ORTHO05D000126 3.3e-06 55.8 103 31.1
BcaB02g11127 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-06 55.5 125 25.6
Lj2g0021852 Lotus japonicus HOM05D000003 ORTHO05D000126 4.4e-06 55.5 141 27.0
Lj3g0009210 Lotus japonicus HOM05D000003 ORTHO05D000126 4.4e-06 55.5 141 27.0
Sabra04G0086900 Salix brachista HOM05D000003 ORTHO05D000007 4.4e-06 55.5 80 28.8
Sabra11G0089100 Salix brachista HOM05D000003 ORTHO05D000007 4.4e-06 55.5 96 27.1
Aqoxy2G02537 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 5.7e-06 55.1 91 26.4
FAN14G2235 Fragaria x ananassa HOM05D003375 ORTHO05D004719 5.7e-06 55.1 86 32.6
QL03p023077 Quercus lobata HOM05D000003 ORTHO05D000126 5.7e-06 55.1 84 29.8
QL09p012273 Quercus lobata HOM05D000003 ORTHO05D000126 5.7e-06 55.1 89 31.5
Sabra09G0131900 Salix brachista HOM05D000003 ORTHO05D000007 5.7e-06 55.1 81 29.6
CSS0008466 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.5e-06 54.7 96 26.0
FAN19G2978 Fragaria x ananassa HOM05D017403 ORTHO05D046214 7.5e-06 54.7 76 35.5
PSO478G5261 Papaver somniferum HOM05D000003 ORTHO05D000007 7.5e-06 54.7 97 25.8
Sabra01G0032000 Salix brachista HOM05D000003 ORTHO05D000007 7.5e-06 54.7 78 32.1
QL03p031860 Quercus lobata HOM05D000003 ORTHO05D000126 9.7e-06 54.3 90 33.3
QL08p015789 Quercus lobata HOM05D000003 ORTHO05D000126 9.7e-06 54.3 90 33.3
Sabra16G0322100 Salix brachista HOM05D000003 ORTHO05D000007 9.7e-06 54.3 81 29.6


User provided reference genes

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