Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.3e-251 871.3 461 100.0
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.2e-245 852.8 461 97.8
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 4.6e-245 850.9 461 98.0
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 1.0e-207 726.9 471 83.7
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 2.6e-187 659.1 343 98.3
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 7.2e-182 641.0 394 85.5
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 4.7e-165 585.1 479 69.1
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 1.6e-160 570.1 481 66.9
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 1.6e-152 543.5 477 65.2
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 4.4e-147 525.4 474 65.4
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 1.9e-145 520.0 475 63.8
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 2.0e-144 516.5 474 65.2
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 7.8e-144 514.6 475 62.5
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 1.7e-143 513.5 472 62.7
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 6.6e-143 511.5 464 64.7
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 1.6e-141 506.9 471 65.2
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 6.8e-140 501.5 454 60.8
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.5e-139 500.4 474 62.2
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 2.2e-138 496.5 407 68.8
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 6.4e-138 495.0 474 60.8
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 9.2e-137 491.1 471 60.9
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 2.7e-136 489.6 471 60.7
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 6.0e-136 488.4 474 60.8
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 6.0e-136 488.4 490 59.0
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 3.0e-135 486.1 474 59.5
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 3.9e-135 485.7 469 58.6
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 3.3e-134 482.6 474 61.0
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 9.5e-134 481.1 471 59.4
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 1.5e-131 473.8 476 58.4
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.5e-131 473.8 533 52.2
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 3.8e-130 469.2 464 59.9
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 3.8e-130 469.2 434 60.8
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 1.4e-129 467.2 464 56.9
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 2.5e-126 456.4 442 61.1
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 5.6e-126 455.3 411 61.6
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 8.1e-125 451.4 471 57.3
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 1.1e-124 451.1 478 59.2
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 1.8e-124 450.3 471 57.1
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 3.1e-124 449.5 473 55.8
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 5.2e-124 448.7 476 58.2
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 7.6e-123 444.9 470 55.5
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 1.3e-122 444.1 476 56.7
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 3.8e-122 442.6 476 56.5
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 1.9e-121 440.3 476 56.3
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 2.4e-121 439.9 472 55.5
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 4.2e-121 439.1 462 57.8
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 5.4e-121 438.7 488 53.3
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 7.1e-121 438.3 476 54.8
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 8.7e-119 431.4 474 56.5
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 8.7e-119 431.4 475 57.3
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 1.9e-118 430.3 468 54.3
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 3.3e-118 429.5 470 57.0
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 3.3e-118 429.5 477 55.8
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 5.6e-118 428.7 468 55.6
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 3.6e-117 426.0 480 54.2
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 8.1e-117 424.9 471 52.9
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 8.1e-117 424.9 470 54.3
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 1.8e-116 423.7 464 52.6
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 5.3e-116 422.2 477 56.2
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 1.3e-114 417.5 478 52.3
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.7e-114 417.2 466 53.0
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 2.2e-114 416.8 480 54.8
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 3.8e-114 416.0 408 58.6
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 3.2e-113 412.9 432 55.1
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 6.7e-111 405.2 474 55.9
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 2.5e-110 403.3 481 53.6
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 4.8e-109 399.1 356 61.0
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 8.1e-109 398.3 474 55.1
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 2.4e-108 396.7 473 55.4
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 4.5e-107 392.5 466 51.1
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 1.7e-106 390.6 404 58.2
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 3.8e-106 389.4 425 53.9
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 9.3e-105 384.8 455 50.1
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 1.2e-104 384.4 339 62.8
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 3.5e-104 382.9 477 54.3
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 6.0e-104 382.1 350 58.6
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 7.9e-104 381.7 472 52.8
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 2.3e-103 380.2 468 53.0
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 5.1e-103 379.0 472 51.7
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 8.7e-103 378.3 471 52.0
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 1.5e-102 377.5 472 51.9
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 1.9e-102 377.1 474 52.5
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 2.8e-101 373.2 343 60.9
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 4.8e-101 372.5 463 50.3
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 1.4e-100 370.9 404 52.0
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 1.8e-100 370.5 534 45.1
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 5.3e-100 369.0 430 50.9
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 2.3e-95 353.6 262 68.3
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 2.8e-93 346.7 367 55.9
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 1.8e-92 344.0 393 50.6
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 1.1e-86 324.7 403 50.9
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 2.2e-82 310.5 380 47.9
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 3.7e-77 293.1 319 50.8
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 5.5e-73 279.3 486 41.2
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 1.8e-71 274.2 284 56.7
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.3e-71 273.9 472 43.6
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.2e-69 267.3 474 42.6
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 4.8e-69 266.2 442 44.8
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.0e-66 258.5 178 71.3
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 2.2e-66 257.3 465 38.5
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 6.1e-56 222.6 398 44.5
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 1.6e-51 208.0 226 48.7
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 4.5e-51 206.5 362 37.3
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 4.0e-47 193.4 176 60.8
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 8.6e-42 175.6 226 51.8
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.2e-32 145.2 195 45.1
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 8.6e-26 122.5 186 45.2
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 6.4e-21 106.3 220 36.8
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 1.1e-12 79.0 76 56.6
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 2.5e-09 67.8 42 73.8


User provided reference genes

Program Settings