Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.4e-34 149.1 75 100.0
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.1e-34 147.5 75 98.7
FAN07G1623 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.6e-33 144.8 75 97.3
FAN12G0147 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.7e-32 142.1 75 94.7
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 1.8e-29 132.1 75 92.0
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 2.0e-12 75.5 76 53.9
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 4.8e-11 70.9 79 51.9
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 4.8e-11 70.9 79 51.9
CsaV3_5G034590 Cucumis sativus L. HOM05D022275 ORTHO05D010089 1.8e-10 68.9 75 45.3
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.1e-10 68.2 77 46.8
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.1e-10 67.8 77 45.5
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 7.0e-10 67.0 81 50.6
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 7.0e-10 67.0 81 50.6
MELO3C012274.2 Cucumis melo HOM05D022275 ORTHO05D010089 7.0e-10 67.0 75 45.3
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 9.1e-10 66.6 79 48.1
QL93p0145_0019 Quercus lobata HOM05D008114 ORTHO05D010089 2.0e-09 65.5 59 57.6
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.5e-09 64.3 74 43.2
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 5.9e-09 63.9 59 55.9
Sed0006257 Sechium edule HOM05D022275 ORTHO05D010089 7.7e-09 63.5 70 47.1
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 1.0e-08 63.2 68 50.0
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.3e-08 62.8 77 50.6
Aa31LG4G11900 Aethionema arabicum HOM05D013984 ORTHO05D010089 1.7e-08 62.4 69 50.7
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 3.8e-08 61.2 79 45.6
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 5.0e-08 60.8 76 48.7
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 6.5e-08 60.5 72 45.8
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 1.1e-07 59.7 54 63.0
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 1.1e-07 59.7 75 46.7
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.1e-07 59.7 81 51.9
Migut.E00368 Erythranthe guttata HOM05D008114 ORTHO05D010089 1.5e-07 59.3 68 45.6
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 1.9e-07 58.9 69 50.7
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.5e-07 58.5 76 46.1
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 3.2e-07 58.2 72 47.2
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 3.2e-07 58.2 56 53.6
CiPaw.06G016700 Carya illinoinensis HOM05D008114 ORTHO05D010089 4.2e-07 57.8 72 48.6
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 4.2e-07 57.8 69 47.8
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 7.2e-07 57.0 68 48.5
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 7.2e-07 57.0 65 49.2
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 7.2e-07 57.0 69 46.4
Psat6g224640 Pisum sativum HOM05D021627 ORTHO05D021511 1.2e-06 56.2 58 50.0
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.2e-06 56.2 81 50.6
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.6e-06 55.8 78 50.0
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 2.7e-06 55.1 68 48.5
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 3.6e-06 54.7 68 47.1
COL.COLO4_32149 Corchorus olitorius HOM05D008114 ORTHO05D010089 3.6e-06 54.7 64 43.8
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 4.7e-06 54.3 68 50.0
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 6.1e-06 53.9 80 43.8
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 6.1e-06 53.9 80 43.8


User provided reference genes

Program Settings