Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1031 Fragaria x ananassa HOM05D063146 ORTHO05D000081 3.5e-85 318.2 151 100.0
FAN07G0738 Fragaria x ananassa HOM05D063146 ORTHO05D203562 1.9e-54 216.1 123 84.6
FAN12G2492 Fragaria x ananassa HOM05D004078 ORTHO05D004823 1.6e-34 149.8 77 90.9
RcHm_v2.0_Chr4g0431821 Rosa chinensis HOM05D000148 ORTHO05D000081 8.5e-23 110.9 112 59.8
FvH4_4g24720 Fragaria vesca HOM05D000148 ORTHO05D000081 1.4e-22 110.2 112 60.7
FAN12G1281 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.4e-22 110.2 112 60.7
FAN17G0600 Fragaria x ananassa HOM05D000148 ORTHO05D000081 9.4e-22 107.5 109 57.8
FAN13G1908 Fragaria x ananassa HOM05D000148 ORTHO05D000081 8.2e-18 94.4 116 49.1
FvH4_5g39380 Fragaria vesca HOM05D000148 ORTHO05D000081 1.8e-17 93.2 116 49.1
FAN08G2440 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.8e-17 93.2 116 49.1
FAN18G3722 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.8e-17 93.2 116 49.1
FAN12G0104 Fragaria x ananassa HOM05D000148 ORTHO05D000081 2.0e-16 89.7 105 48.6
RcHm_v2.0_Chr4g0431851 Rosa chinensis HOM05D000148 ORTHO05D000081 2.0e-16 89.7 100 53.0
FAN22G2345 Fragaria x ananassa HOM05D000148 ORTHO05D000081 3.5e-16 89.0 105 47.6
FvH4_4g24770 Fragaria vesca HOM05D000148 ORTHO05D000081 7.7e-16 87.8 105 47.6
RcHm_v2.0_Chr4g0417441 Rosa chinensis HOM05D000148 ORTHO05D000081 1.3e-15 87.0 100 51.0
RcHm_v2.0_Chr4g0417461 Rosa chinensis HOM05D000148 ORTHO05D000081 1.3e-15 87.0 100 51.0
Prupe.1G236800 Prunus persica HOM05D000148 ORTHO05D000081 1.7e-15 86.7 117 47.9
FAN17G0032 Fragaria x ananassa HOM05D000148 ORTHO05D000081 3.8e-15 85.5 105 47.6
Prupe.1G236600 Prunus persica HOM05D000148 ORTHO05D000081 5.0e-15 85.1 135 42.2
MD13G1109100 Malus domestica HOM05D000148 ORTHO05D000081 6.5e-15 84.7 117 47.9
Prupe.1G236700 Prunus persica HOM05D000148 ORTHO05D000081 8.5e-15 84.3 117 47.0
MD13G1114800 Malus domestica HOM05D000148 ORTHO05D000081 2.5e-14 82.8 113 48.7
MD13G1114400 Malus domestica HOM05D000148 ORTHO05D000081 2.1e-13 79.7 113 46.0
MD10G1199500 Malus domestica HOM05D000148 ORTHO05D000081 1.8e-12 76.6 134 42.5
RcHm_v2.0_Chr3g0490281 Rosa chinensis HOM05D000148 ORTHO05D000081 2.3e-12 76.3 126 43.7
FAN07G0565 Fragaria x ananassa HOM05D000148 ORTHO05D000081 4.0e-12 75.5 106 44.3
Duzib268G0234 Durio zibethinus HOM05D000148 ORTHO05D000081 5.2e-12 75.1 111 43.2
RcHm_v2.0_Chr4g0431811 Rosa chinensis HOM05D000148 ORTHO05D000081 5.2e-12 75.1 125 44.0
Gorai.005G173100 Gossypium raimondii HOM05D000148 ORTHO05D000081 1.2e-11 73.9 102 47.1
FvH4_4g24772 Fragaria vesca HOM05D000148 ORTHO05D000081 2.6e-11 72.8 97 44.3
Gohir.A03G130201 Gossypium hirsutum HOM05D000148 ORTHO05D000081 4.4e-11 72.0 89 47.2
TWI18G0490 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 4.4e-11 72.0 93 47.3
COL.COLO4_23588 Corchorus olitorius HOM05D000148 ORTHO05D000081 5.7e-11 71.6 110 41.8
COL.COLO4_23582 Corchorus olitorius HOM05D000148 ORTHO05D000081 7.5e-11 71.2 101 41.6
FAN07G1075 Fragaria x ananassa HOM05D000148 ORTHO05D000081 9.7e-11 70.9 101 43.6
COL.COLO4_23581 Corchorus olitorius HOM05D000148 ORTHO05D000081 1.3e-10 70.5 119 40.3
TWI18G0804 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 1.3e-10 70.5 97 44.3
COL.COLO4_23587 Corchorus olitorius HOM05D000148 ORTHO05D000081 1.7e-10 70.1 74 48.6
Duzib251G0688 Durio zibethinus HOM05D000148 ORTHO05D000081 1.7e-10 70.1 111 42.3
Gohir.A12G146800 Gossypium hirsutum HOM05D000148 ORTHO05D000081 2.2e-10 69.7 101 42.6
Gohir.D12G151400 Gossypium hirsutum HOM05D000148 ORTHO05D000081 2.2e-10 69.7 101 42.6
Gohir.D02G154000 Gossypium hirsutum HOM05D000148 ORTHO05D000081 2.8e-10 69.3 102 45.1
Gorai.008G162900 Gossypium raimondii HOM05D000148 ORTHO05D000081 2.8e-10 69.3 101 42.6
COL.COLO4_23571 Corchorus olitorius HOM05D000148 ORTHO05D000081 3.7e-10 68.9 101 43.6
COL.COLO4_23595 Corchorus olitorius HOM05D000148 ORTHO05D000081 3.7e-10 68.9 101 42.6
FvH4_5g06190 Fragaria vesca HOM05D000148 ORTHO05D000081 3.7e-10 68.9 102 43.1
FAN18G2409 Fragaria x ananassa HOM05D000148 ORTHO05D000081 3.7e-10 68.9 102 43.1
COL.COLO4_23585 Corchorus olitorius HOM05D000148 ORTHO05D000081 4.8e-10 68.6 74 48.6
Duzib251G0674 Durio zibethinus HOM05D000148 ORTHO05D000081 4.8e-10 68.6 101 45.5
FvH4_4g24680 Fragaria vesca HOM05D000148 ORTHO05D000081 6.3e-10 68.2 93 41.9
FvH4_4g24760 Fragaria vesca HOM05D000148 ORTHO05D000081 6.3e-10 68.2 101 41.6
FAN07G0040 Fragaria x ananassa HOM05D000148 ORTHO05D000081 6.3e-10 68.2 115 41.7
FAN12G2968 Fragaria x ananassa HOM05D000148 ORTHO05D000081 6.3e-10 68.2 93 41.9
Gohir.A03G130100 Gossypium hirsutum HOM05D000148 ORTHO05D000081 6.3e-10 68.2 105 41.0
Duzib248G1378 Durio zibethinus HOM05D000148 ORTHO05D000081 8.2e-10 67.8 112 41.1
FAN07G1826 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.1e-09 67.4 93 40.9
Thecc.02G271300 Theobroma cacao HOM05D000148 ORTHO05D000081 1.1e-09 67.4 100 44.0
FAN13G1666 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.4e-09 67.0 102 42.2
Prupe.1G236500 Prunus persica HOM05D000148 ORTHO05D000081 1.4e-09 67.0 107 41.1
CiPaw.05G173700 Carya illinoinensis HOM05D000148 ORTHO05D000081 1.8e-09 66.6 94 40.4
MD13G1109300 Malus domestica HOM05D000148 ORTHO05D000081 1.8e-09 66.6 100 42.0
COL.COLO4_23593 Corchorus olitorius HOM05D000148 ORTHO05D000081 2.4e-09 66.2 110 39.1
Gohir.A10G175100 Gossypium hirsutum HOM05D000148 ORTHO05D000081 3.1e-09 65.9 103 43.7
COL.COLO4_23589 Corchorus olitorius HOM05D000148 ORTHO05D000081 4.1e-09 65.5 110 37.3
COL.COLO4_23590 Corchorus olitorius HOM05D000148 ORTHO05D000081 4.1e-09 65.5 104 40.4
RcHm_v2.0_Chr4g0431801 Rosa chinensis HOM05D000148 ORTHO05D000081 4.1e-09 65.5 93 39.8
Gohir.D02G153800 Gossypium hirsutum HOM05D000148 ORTHO05D000081 5.3e-09 65.1 105 40.0
COL.COLO4_23583 Corchorus olitorius HOM05D000148 ORTHO05D000081 7.0e-09 64.7 88 43.2
Gohir.D10G181500 Gossypium hirsutum HOM05D000148 ORTHO05D000081 7.0e-09 64.7 103 43.7
Gorai.005G172900 Gossypium raimondii HOM05D000148 ORTHO05D000081 7.0e-09 64.7 105 40.0
Gorai.011G203000 Gossypium raimondii HOM05D000148 ORTHO05D000081 7.0e-09 64.7 103 43.7
Thecc.02G271800 Theobroma cacao HOM05D000148 ORTHO05D000081 7.0e-09 64.7 110 40.0
Haze_12328 Corylus avellana HOM05D000148 ORTHO05D000081 9.1e-09 64.3 100 41.0
MD10G1199300 Malus domestica HOM05D000148 ORTHO05D000081 9.1e-09 64.3 129 40.3
QL03p055464 Quercus lobata HOM05D000148 ORTHO05D000081 9.1e-09 64.3 105 40.0
Duzib251G0095 Durio zibethinus HOM05D000148 ORTHO05D000081 1.2e-08 63.9 119 39.5
Glyma.07G000700 Glycine max HOM05D000148 ORTHO05D000081 1.2e-08 63.9 91 39.6
Cfa005302 Carpinus fangiana HOM05D000148 ORTHO05D000081 2.7e-08 62.8 105 40.0
Ciclev10033777m.g Citrus clementina HOM05D000148 ORTHO05D000081 3.5e-08 62.4 105 39.0
RcHm_v2.0_Chr3g0478851 Rosa chinensis HOM05D000148 ORTHO05D000081 4.5e-08 62.0 136 40.4
Cc11_g16420 Coffea canephora HOM05D000148 ORTHO05D000081 7.7e-08 61.2 139 33.1
RcHm_v2.0_Chr3g0490301 Rosa chinensis HOM05D000148 ORTHO05D000081 7.7e-08 61.2 35 82.9
Sabra10G0016800 Salix brachista HOM05D000148 ORTHO05D000081 7.7e-08 61.2 92 42.4
MD10G1161400 Malus domestica HOM05D000148 ORTHO05D000081 2.2e-07 59.7 128 38.3
Thecc.02G271100 Theobroma cacao HOM05D000148 ORTHO05D000081 2.2e-07 59.7 94 37.2
Gohir.A04G137900 Gossypium hirsutum HOM05D000148 ORTHO05D000081 2.9e-07 59.3 101 37.6
Lalb_Chr23g0277841 Lupinus albus HOM05D000148 ORTHO05D000081 2.9e-07 59.3 88 37.5
Potri.010G053800 Populus trichocarpa HOM05D000148 ORTHO05D000081 2.9e-07 59.3 83 43.4
Potri.010G054002 Populus trichocarpa HOM05D000148 ORTHO05D000081 2.9e-07 59.3 83 43.4
ClCG05G026240 Citrullus lanatus HOM05D000148 ORTHO05D000081 3.8e-07 58.9 97 34.0
Prupe.4G142000 Prunus persica HOM05D000148 ORTHO05D000081 3.8e-07 58.9 113 38.9
Gorai.012G174300 Gossypium raimondii HOM05D000148 ORTHO05D000081 6.5e-07 58.2 101 38.6
CANSAT78G1569 Cannabis sativa HOM05D000148 ORTHO05D000081 8.5e-07 57.8 94 39.4
Prupe.4G142100 Prunus persica HOM05D000148 ORTHO05D000081 1.1e-06 57.4 118 40.7
arahy.Tifrunner.gnm1.ann1.F4TQ07 Arachis hypogaea HOM05D000148 ORTHO05D000081 1.5e-06 57.0 76 42.1
Cfa009292 Carpinus fangiana HOM05D000148 ORTHO05D000081 1.5e-06 57.0 94 37.2
Cfa009293 Carpinus fangiana HOM05D000148 ORTHO05D000081 1.5e-06 57.0 94 37.2
COL.COLO4_23591 Corchorus olitorius HOM05D000148 ORTHO05D000081 1.5e-06 57.0 75 40.0
Gohir.D04G181050 Gossypium hirsutum HOM05D000148 ORTHO05D000081 1.5e-06 57.0 101 37.6
MD16G1108800 Malus domestica HOM05D000148 ORTHO05D000081 1.5e-06 57.0 90 35.6
VMungo0331G0800 Vigna mungo HOM05D000148 ORTHO05D000081 1.5e-06 57.0 76 40.8
CANSAT01G1466 Cannabis sativa HOM05D000148 ORTHO05D000081 1.9e-06 56.6 106 37.7
MELO3C011900.2 Cucumis melo HOM05D000148 ORTHO05D000081 1.9e-06 56.6 97 32.0
PGR102G2348 Punica granatum HOM05D000148 ORTHO05D000081 1.9e-06 56.6 110 38.2
Sabra10G0016700 Salix brachista HOM05D000148 ORTHO05D000081 1.9e-06 56.6 61 47.5
arahy.Tifrunner.gnm1.ann1.I7VPJ4 Arachis hypogaea HOM05D000148 ORTHO05D000081 2.5e-06 56.2 76 42.1
CsaV3_5G030590 Cucumis sativus L. HOM05D000148 ORTHO05D000081 2.5e-06 56.2 82 37.8
MELO3C011899.2 Cucumis melo HOM05D000148 ORTHO05D000081 3.2e-06 55.8 82 36.6
Glyma.11G074700 Glycine max HOM05D000148 ORTHO05D000081 3.2e-06 55.8 101 34.7
PGSC0003DMG400016375 Solanum tuberosum HOM05D000148 ORTHO05D000081 3.2e-06 55.8 48 54.2
Haze_12324 Corylus avellana HOM05D000148 ORTHO05D000081 4.2e-06 55.5 94 35.1
PGR102G3350 Punica granatum HOM05D000148 ORTHO05D000081 4.2e-06 55.5 101 39.6
QL03p055719 Quercus lobata HOM05D000148 ORTHO05D000081 5.5e-06 55.1 61 45.9
FAN07G1038 Fragaria x ananassa HOM05D000148 ORTHO05D000081 7.2e-06 54.7 72 51.4
Medtr3g086020 Medicago truncatula HOM05D000148 ORTHO05D000081 7.2e-06 54.7 75 36.0
CANSAT01G1670 Cannabis sativa HOM05D000148 ORTHO05D000081 9.4e-06 54.3 105 36.2
CsaV3_5G030600 Cucumis sativus L. HOM05D000148 ORTHO05D000081 9.4e-06 54.3 90 32.2
Dinv11006 Davidia involucrata HOM05D000148 ORTHO05D000081 9.4e-06 54.3 92 38.0
Gohir.A07G097200 Gossypium hirsutum HOM05D000148 ORTHO05D000081 9.4e-06 54.3 116 35.3
Lj6P819T41 Lonicera japonica HOM05D000148 ORTHO05D000081 9.4e-06 54.3 48 50.0


User provided reference genes

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