Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1021 Fragaria x ananassa HOM05D005904 ORTHO05D007074 1.5e-47 192.6 101 100.0
FAN07G2466 Fragaria x ananassa HOM05D005904 ORTHO05D007074 9.6e-47 189.9 101 99.0
FvH4_4g12940 Fragaria vesca HOM05D005904 ORTHO05D007074 4.8e-46 187.6 101 98.0
FAN12G1666 Fragaria x ananassa HOM05D005904 ORTHO05D007074 3.4e-44 181.4 96 99.0
RcHm_v2.0_Chr6g0267021 Rosa chinensis HOM05D005904 ORTHO05D007074 1.5e-39 166.0 96 88.5
Prupe.3G050600 Prunus persica HOM05D005904 ORTHO05D007074 1.1e-34 149.8 95 84.2
MD09G1194100 Malus domestica HOM05D005904 ORTHO05D007074 1.9e-34 149.1 97 79.4
Manes.04G139100 Manihot esculenta HOM05D005904 ORTHO05D007074 1.9e-34 149.1 95 83.2
QL05p012810 Quercus lobata HOM05D005904 ORTHO05D007074 1.9e-34 149.1 93 82.8
CiPaw.02G140600 Carya illinoinensis HOM05D005904 ORTHO05D007074 9.3e-34 146.7 100 76.0
Potri.001G200300 Populus trichocarpa HOM05D005904 ORTHO05D007074 4.6e-33 144.4 100 74.0
CSS0014810 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 6.1e-33 144.1 96 76.0
CANSAT56G1468 Cannabis sativa HOM05D005904 ORTHO05D007074 7.9e-33 143.7 99 77.8
GSVIVG01016848001 Vitis vinifera HOM05D005904 ORTHO05D007074 1.0e-32 143.3 87 83.9
Cpa.g.sc25.58 Carica papaya HOM05D005904 ORTHO05D007074 1.3e-32 142.9 86 84.9
ClCG07G013710 Citrullus lanatus HOM05D005904 ORTHO05D007074 1.8e-32 142.5 97 78.4
CsaV3_3G043900 Cucumis sativus L. HOM05D005904 ORTHO05D007074 1.8e-32 142.5 101 76.2
Lj5A45T77 Lonicera japonica HOM05D005904 ORTHO05D007074 1.8e-32 142.5 94 78.7
Peaxi162Scf00038g01518 Petunia axillaris HOM05D005904 ORTHO05D007074 3.0e-32 141.7 89 78.7
Dinv30384 Davidia involucrata HOM05D005904 ORTHO05D007074 5.1e-32 141.0 97 75.3
Lsat_1_v5_gn_5_134821 Lactuca sativa HOM05D005904 ORTHO05D007074 6.7e-32 140.6 94 79.8
Oeu039966.1 Olea europaea HOM05D005904 ORTHO05D007074 6.7e-32 140.6 87 78.2
Sabra01G0156900 Salix brachista HOM05D005904 ORTHO05D007074 6.7e-32 140.6 94 77.7
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 8.7e-32 140.2 97 76.3
Sed0023540 Sechium edule HOM05D005904 ORTHO05D007074 8.7e-32 140.2 95 78.9
Aqoxy7G04049 Aquilegia oxysepala HOM05D005904 ORTHO05D007074 1.1e-31 139.8 99 71.7
HanXRQChr10g0310911 Helianthus annuus HOM05D005904 ORTHO05D007074 1.5e-31 139.4 98 72.4
ECA234G0674 Erigeron canadensis HOM05D005904 ORTHO05D007074 2.5e-31 138.7 94 75.5
Nn6g35465 Nelumbo nucifera HOM05D005904 ORTHO05D007074 3.3e-31 138.3 93 77.4
Thecc.06G110900 Theobroma cacao HOM05D005904 ORTHO05D007074 3.3e-31 138.3 94 76.6
Glyma.15G023700 Glycine max HOM05D005904 ORTHO05D007074 7.4e-31 137.1 95 71.6
Actinidia21754 Actinidia chinensis HOM05D005904 ORTHO05D007074 2.2e-30 135.6 83 79.5
MSTRG.22589 Avicennia marina HOM05D005904 ORTHO05D007074 2.2e-30 135.6 94 69.1
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 2.8e-30 135.2 87 77.0
Solyc03g121530.3 Solanum lycopersicum HOM05D005904 ORTHO05D007074 2.8e-30 135.2 89 74.2
Sopen03g040340 Solanum pennellii HOM05D005904 ORTHO05D007074 2.8e-30 135.2 89 74.2
VMungo1080G0888 Vigna mungo HOM05D005904 ORTHO05D007074 3.7e-30 134.8 95 69.5
TAR383G0617 Trochodendron aralioides HOM05D005904 ORTHO05D007074 4.8e-30 134.4 94 74.5
TAR626G1971 Trochodendron aralioides HOM05D005904 ORTHO05D007074 4.8e-30 134.4 98 70.4
Cc07_g04610 Coffea canephora HOM05D005904 ORTHO05D007074 6.3e-30 134.0 93 73.1
Medtr2g100220 Medicago truncatula HOM05D005904 ORTHO05D007074 6.3e-30 134.0 87 75.9
CAN.G1389.13 Capsicum annuum HOM05D005904 ORTHO05D007074 8.2e-30 133.7 87 74.7
Migut.O00807 Erythranthe guttata HOM05D005904 ORTHO05D007074 8.2e-30 133.7 87 74.7
Gorai.011G065700 Gossypium raimondii HOM05D005904 ORTHO05D007074 8.2e-30 133.7 94 72.3
EL10Ac7g15769 Beta vulgaris HOM05D005904 ORTHO05D007074 1.1e-29 133.3 97 73.2
TWI31G1228 Tripterygium wilfordii HOM05D005904 ORTHO05D007074 1.1e-29 133.3 102 66.7
Duzib235G0974 Durio zibethinus HOM05D005904 ORTHO05D007074 1.8e-29 132.5 94 73.4
Eucgr.F03129 Eucalyptus grandis HOM05D005904 ORTHO05D007074 1.8e-29 132.5 86 75.6
Gohir.A10G060500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 1.8e-29 132.5 94 72.3
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea HOM05D005904 ORTHO05D007074 3.1e-29 131.7 87 73.6
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea HOM05D005904 ORTHO05D007074 3.1e-29 131.7 87 73.6
Rhsim08G0232900 Rhododendron simsii HOM05D005904 ORTHO05D007074 3.1e-29 131.7 89 74.2
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 3.1e-29 131.7 86 76.7
Nitab4.5_0001295g0010 Nicotiana tabacum HOM05D005904 ORTHO05D007074 4.1e-29 131.3 89 74.2
PSO210G1067 Papaver somniferum HOM05D005904 ORTHO05D007074 4.1e-29 131.3 94 70.2
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 5.3e-29 131.0 99 68.7
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 5.3e-29 131.0 99 68.7
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 5.3e-29 131.0 86 74.4
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 6.9e-29 130.6 99 68.7
Sc12g0010220 Simmondsia chinensis HOM05D005904 ORTHO05D007074 6.9e-29 130.6 87 74.7
Carub.0003s1326 Capsella rubella HOM05D005904 ORTHO05D007074 9.0e-29 130.2 99 67.7
Phvul.005G160100 Phaseolus vulgaris HOM05D005904 ORTHO05D007074 9.0e-29 130.2 95 68.4
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.2e-28 129.8 99 66.7
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 1.2e-28 129.8 93 72.0
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 1.2e-28 129.8 93 72.0
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 1.2e-28 129.8 93 72.0
CDE06G0040 Ceratophyllum demersum HOM05D005904 ORTHO05D007074 1.5e-28 129.4 90 70.0
PSO210G2600 Papaver somniferum HOM05D005904 ORTHO05D007074 1.5e-28 129.4 84 72.6
Gohir.D10G061500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 2.0e-28 129.0 94 71.3
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 3.4e-28 128.3 99 66.7
Hund18723 Selenicereus undatus HOM05D005904 ORTHO05D007074 4.5e-28 127.9 98 69.4
unitig_0.g2872 Utricularia gibba HOM05D005904 ORTHO05D007074 4.5e-28 127.9 89 68.5
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 7.7e-28 127.1 92 70.7
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 1.0e-27 126.7 93 69.9
PGR044G1952 Punica granatum HOM05D005904 ORTHO05D007074 1.7e-27 125.9 87 67.8
Ah.08g216180 Amaranthus hybridus HOM05D005904 ORTHO05D007074 3.8e-27 124.8 87 73.6
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 3.8e-27 124.8 86 72.1
DCAR_022713 Daucus carota HOM05D005904 ORTHO05D007074 5.0e-27 124.4 86 74.4
SalBow6G4349 Salvia bowleyana HOM05D005904 ORTHO05D007074 5.0e-27 124.4 110 60.0
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 6.5e-27 124.0 86 73.3
Zm00001eb120860 Zea mays HOM05D005904 ORTHO05D007074 6.5e-27 124.0 95 67.4
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 8.5e-27 123.6 86 70.9
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.1e-26 123.2 100 65.0
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 1.1e-26 123.2 86 70.9
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 1.4e-26 122.9 97 66.0
Os05g0318300 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 1.4e-26 122.9 97 64.9
Os11g0237700 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 1.4e-26 122.9 95 66.3
Thhalv10011744m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 3.2e-26 121.7 86 69.8
PGSC0003DMG400002591 Solanum tuberosum HOM05D005904 ORTHO05D007074 3.2e-26 121.7 84 70.2
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 4.2e-26 121.3 86 69.8
HPP92_003969 Vanilla planifolia HOM05D005904 ORTHO05D007074 4.2e-26 121.3 87 70.1
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 5.5e-26 120.9 86 69.8
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 5.5e-26 120.9 86 69.8
Aa31LG10G930 Aethionema arabicum HOM05D005904 ORTHO05D007074 7.2e-26 120.6 85 71.8
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 2.1e-25 119.0 81 72.8
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 2.1e-25 119.0 86 68.6
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 2.1e-25 119.0 86 68.6
AUR62038130 Chenopodium quinoa HOM05D005904 ORTHO05D007074 2.7e-25 118.6 101 64.4
Lalb_Chr24g0396341 Lupinus albus HOM05D005904 ORTHO05D007074 2.7e-25 118.6 95 64.2
MBI01_g01270_MAGBIO Magnolia biondii HOM05D005904 ORTHO05D007074 3.6e-25 118.2 83 72.3
DCAR_016164 Daucus carota HOM05D001529 ORTHO05D003309 1.0e-24 116.7 80 72.5
AUR62009818 Chenopodium quinoa HOM05D005904 ORTHO05D007074 2.3e-24 115.5 101 64.4
Lj9A518G85 Lonicera japonica HOM05D005904 ORTHO05D007074 2.5e-23 112.1 100 64.0
Pp3c14_13400 Physcomitrium patens HOM05D005904 ORTHO05D007074 9.7e-23 110.2 87 60.9
SMO134G0002 Selaginella moellendorffii HOM05D005904 ORTHO05D007074 9.7e-23 110.2 89 61.8
Nn8g38876 Nelumbo nucifera HOM05D005904 ORTHO05D007074 4.8e-22 107.8 94 64.9
Mapoly0003s0025 Marchantia polymorpha HOM05D005904 ORTHO05D007074 5.3e-21 104.4 94 58.5
AagrBONN_evm.TU.Sc2ySwM_344.3620 Anthoceros agrestis HOM05D005904 ORTHO05D007074 1.2e-20 103.2 86 59.3
SGA_v2.0_scaffold45G16976 Striga asiatica HOM05D005904 ORTHO05D007074 1.2e-20 103.2 62 82.3
COL.COLO4_30653 Corchorus olitorius HOM05D005904 ORTHO05D007074 2.0e-20 102.4 66 77.3
Ciclev10026243m.g Citrus clementina HOM05D005904 ORTHO05D007074 1.7e-19 99.4 65 75.4
TPR.G6604 Trifolium pratense HOM05D005904 ORTHO05D007074 8.5e-19 97.1 72 66.7
CBR_g18726 Chara braunii HOM05D005904 ORTHO05D007074 1.1e-18 96.7 84 54.8
Atru.chr1.3688 Acer truncatum HOM05D005904 ORTHO05D007074 4.4e-15 84.7 98 53.1
SEGI_12033 Sequoiadendron giganteum HOM05D005904 ORTHO05D007074 4.4e-15 84.7 61 70.5
ATR0661G556 Amborella trichopoda HOM05D005904 ORTHO05D007074 1.4e-13 79.7 61 65.6
vmacro18789 Vaccinium macrocarpon HOM05D005904 ORTHO05D007074 3.1e-13 78.6 52 75.0
MCO11G030 Micromonas commoda HOM05D005904 ORTHO05D007074 6.1e-09 64.3 83 44.6
Actinidia32143 Actinidia chinensis HOM05D005904 ORTHO05D007074 6.3e-06 54.3 44 56.8


User provided reference genes

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