Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.6e-172 609.4 318 100.0
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 8.5e-166 587.0 319 96.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.9e-165 585.9 322 96.3
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.6e-164 581.6 322 95.7
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.0e-162 575.9 319 96.2
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 2.6e-146 522.3 327 86.2
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 2.7e-119 432.6 311 74.9
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 4.7e-116 421.8 322 70.2
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.6e-95 353.6 342 58.8
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 2.1e-95 353.2 331 58.9
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.1e-93 347.4 317 61.8
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.1e-93 347.4 334 58.7
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.9e-93 346.7 331 61.0
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 8.1e-92 341.3 325 59.7
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 1.1e-91 340.9 341 56.9
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.8e-91 340.1 343 56.6
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.4e-91 339.7 335 60.0
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 3.1e-91 339.3 339 57.8
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 2.6e-90 336.3 323 60.1
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 9.9e-90 334.3 326 58.0
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 2.9e-89 332.8 318 57.2
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 6.4e-89 331.6 325 56.9
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 8.4e-89 331.3 330 58.5
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 8.4e-89 331.3 325 57.2
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.4e-88 330.5 329 58.1
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 2.4e-88 329.7 316 58.9
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 2.4e-88 329.7 330 56.1
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 3.2e-88 329.3 314 58.9
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 4.2e-88 328.9 325 58.2
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 5.5e-88 328.6 326 57.4
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 5.5e-88 328.6 313 60.1
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 7.1e-88 328.2 324 58.3
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.7e-87 326.2 335 55.2
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 1.0e-86 324.3 330 56.7
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.8e-86 323.6 326 56.7
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.3e-86 323.2 317 57.1
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 2.3e-86 323.2 309 59.2
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 6.7e-86 321.6 334 55.4
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 6.7e-86 321.6 326 57.1
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 6.7e-86 321.6 317 57.4
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 8.7e-86 321.2 318 57.9
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 8.7e-86 321.2 326 56.7
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 1.5e-85 320.5 310 59.0
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.9e-85 320.1 334 55.1
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.9e-85 320.1 329 54.7
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 2.8e-84 316.2 316 57.6
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 3.7e-84 315.8 312 55.4
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 4.8e-84 315.5 313 58.5
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 6.2e-84 315.1 319 57.4
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 8.2e-84 314.7 316 55.7
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 1.1e-83 314.3 338 55.0
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.4e-83 313.9 337 55.5
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 4.0e-83 312.4 314 55.7
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 1.2e-82 310.8 317 56.8
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 1.0e-81 307.8 338 52.4
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 2.9e-81 306.2 301 59.5
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 3.8e-81 305.8 433 46.4
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.4e-80 303.9 320 53.8
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.4e-80 303.9 327 54.7
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 4.2e-80 302.4 318 56.3
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 7.1e-80 301.6 305 57.7
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 9.3e-80 301.2 318 53.5
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 2.1e-79 300.1 320 53.1
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 3.5e-79 299.3 322 55.0
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 4.6e-79 298.9 307 55.7
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 6.0e-79 298.5 313 54.0
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 7.9e-79 298.1 325 53.5
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.3e-78 297.4 309 54.4
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.3e-78 297.4 309 54.4
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 1.3e-78 297.4 298 57.4
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 5.1e-78 295.4 298 56.7
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.1e-77 294.3 314 56.7
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.9e-77 293.5 315 54.0
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 7.4e-77 291.6 320 52.5
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 1.3e-76 290.8 330 51.2
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 2.2e-76 290.0 327 52.9
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.7e-76 289.3 360 49.2
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 3.7e-76 289.3 326 51.2
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 3.7e-76 289.3 352 48.3
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 8.2e-76 288.1 323 51.7
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 4.1e-75 285.8 337 52.5
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.1e-72 277.7 274 55.5
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 7.9e-71 271.6 310 53.9
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 7.9e-71 271.6 330 50.9
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.3e-70 270.0 326 48.8
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 5.9e-66 255.4 334 46.4
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 3.8e-65 252.7 328 50.0
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 3.8e-65 252.7 305 49.5
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 8.5e-65 251.5 329 47.7
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 7.2e-64 248.4 254 58.7
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 3.5e-58 229.6 258 52.3
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.3e-57 227.6 270 51.1
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 8.8e-54 214.9 379 37.5
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 1.2e-50 204.5 405 36.8
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.7e-47 193.4 203 55.2
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 4.0e-46 189.5 181 58.6
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 1.9e-40 170.6 370 32.7
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 1.4e-38 164.5 350 33.4
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 3.7e-36 156.4 194 47.4
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 3.1e-35 153.3 282 39.4
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 5.9e-34 149.1 137 62.0
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.8e-27 127.5 123 56.1
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 1.5e-24 117.9 157 46.5
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 1.9e-24 117.5 93 65.6
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 3.6e-23 113.2 211 36.0
FvH4_4g35710 Fragaria vesca HOM05D006361 ORTHO05D007824 4.7e-23 112.8 66 89.4
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 4.0e-22 109.8 104 53.8
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.7e-20 104.4 77 72.7
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 1.7e-20 104.4 62 79.0
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 3.2e-19 100.1 452 23.7
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 3.0e-17 93.6 59 71.2
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 2.1e-15 87.4 108 48.1
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 5.2e-14 82.8 245 28.6
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 8.9e-14 82.0 42 83.3
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.3e-12 78.2 42 81.0
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.7e-12 77.8 43 79.1
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.7e-12 77.8 239 27.2
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.9e-12 77.0 177 30.5
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 7.0e-11 72.4 40 82.5
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 2.1e-10 70.9 42 76.2
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 4.0e-06 56.6 43 65.1


User provided reference genes

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