Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.6e-233 812.4 414 100.0
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.4e-192 676.4 421 86.2
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.8e-182 641.7 369 91.3
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 2.5e-181 639.0 369 91.1
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.5e-181 637.9 369 91.1
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 2.3e-163 579.3 372 82.3
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.1e-156 556.2 369 82.1
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 1.8e-128 463.4 406 64.0
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 3.9e-118 429.1 398 61.3
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 7.1e-96 355.1 425 50.8
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 2.1e-92 343.6 407 50.6
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 4.0e-91 339.3 438 48.4
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.9e-88 330.5 401 50.6
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 1.8e-86 323.9 420 48.6
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 2.3e-86 323.6 432 48.6
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 7.4e-85 318.5 405 48.9
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 1.4e-83 314.3 414 47.8
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 1.5e-82 310.8 407 48.9
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 1.9e-80 303.9 390 49.5
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 1.3e-78 297.7 427 45.7
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 3.9e-78 296.2 431 46.4
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 5.1e-78 295.8 410 46.6
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 2.8e-76 290.0 405 46.7
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.4e-75 287.7 421 43.5
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.2e-74 284.6 449 42.3
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 1.5e-74 284.3 500 41.6
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 1.7e-73 280.8 411 43.8
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 3.0e-70 270.0 431 41.8
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 1.5e-69 267.7 438 42.0
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 7.4e-69 265.4 444 42.1
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 7.6e-66 255.4 409 41.8
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 8.5e-65 251.9 427 41.5
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 2.5e-64 250.4 349 45.0
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 5.5e-64 249.2 407 42.0
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 5.5e-64 249.2 444 40.5
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 7.2e-64 248.8 428 41.4
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 2.7e-63 246.9 426 41.1
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.1e-63 245.7 126 100.0
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 3.3e-61 240.0 408 42.2
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 7.4e-61 238.8 393 41.0
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 9.7e-61 238.4 429 38.5
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 9.7e-61 238.4 428 38.8
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 2.0e-58 230.7 463 36.1
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 2.6e-58 230.3 426 39.4
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 3.4e-58 229.9 402 38.8
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 9.4e-56 221.9 389 39.1
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 6.1e-55 219.2 422 39.3
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 1.4e-54 218.0 339 44.0
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 4.4e-53 213.0 404 38.4
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 4.4e-53 213.0 376 41.2
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 7.4e-53 212.2 224 53.1
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 7.4e-53 212.2 489 36.0
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 1.3e-52 211.5 448 36.6
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.7e-52 211.1 209 57.9
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 5.9e-50 202.6 404 36.9
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 3.2e-48 196.8 479 33.6
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.2e-47 194.9 453 34.7
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.6e-47 194.5 375 39.7
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 1.0e-46 191.8 395 37.0
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 3.3e-45 186.8 295 41.0
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 9.7e-45 185.3 415 37.8
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 1.8e-43 181.0 192 55.7
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 3.5e-42 176.8 462 33.1
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.0e-41 175.3 340 35.6
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 3.8e-41 173.3 422 34.4
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 1.9e-40 171.0 424 34.4
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 1.9e-40 171.0 400 36.5
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 1.9e-40 171.0 211 46.9
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.1e-39 167.5 396 34.3
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 1.2e-37 161.8 171 52.6
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 2.0e-37 161.0 366 35.0
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 1.3e-36 158.3 303 37.6
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.3e-36 158.3 307 37.5
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 1.3e-33 148.3 382 35.1
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 7.2e-32 142.5 277 37.9
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 1.2e-31 141.7 154 53.9
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 3.6e-31 140.2 350 33.1
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 8.0e-31 139.0 95 75.8
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 1.8e-30 137.9 284 36.3
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 9.8e-29 132.1 315 34.3
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 2.2e-28 131.0 314 36.6
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 3.1e-27 127.1 402 30.3
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 4.2e-24 116.7 375 30.7
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 1.2e-23 115.2 170 41.2
FAN17G3118 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.7e-21 106.3 73 82.2
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 3.8e-17 93.6 277 29.6
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 5.6e-16 89.7 352 27.6
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.2e-15 88.6 248 31.5
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 1.8e-14 84.7 73 63.0
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 2.0e-13 81.3 418 27.3
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 2.0e-10 71.2 74 56.8
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 2.3e-09 67.8 191 33.0
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 2.5e-08 64.3 169 26.6
HanXRQChr03g0080081 Helianthus annuus HOM05D007369 ORTHO05D009369 1.8e-06 58.2 185 29.7
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.8e-06 58.2 121 32.2


User provided reference genes

Program Settings