Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.4e-131 472.2 250 100.0
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 2.4e-123 445.7 250 95.2
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.2e-122 443.4 252 94.4
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.5e-122 441.8 257 93.4
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.3e-118 429.1 255 92.5
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 6.8e-118 427.6 250 90.4
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 2.6e-101 372.5 251 78.1
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 2.5e-88 329.3 231 74.5
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 1.7e-81 306.6 242 64.9
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 2.5e-80 302.8 242 65.7
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 2.5e-80 302.8 242 65.7
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 8.1e-79 297.7 251 63.3
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 2.2e-76 289.7 248 61.3
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 4.9e-76 288.5 248 62.1
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 1.4e-75 287.0 245 60.8
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 3.2e-75 285.8 244 61.9
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 9.3e-75 284.3 242 62.8
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 8.7e-73 277.7 246 59.8
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.1e-72 277.3 245 57.6
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 1.1e-72 277.3 251 59.4
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 2.4e-70 269.6 246 60.6
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 4.0e-70 268.9 247 56.7
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 4.0e-70 268.9 247 56.7
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 5.3e-70 268.5 250 56.4
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 5.3e-70 268.5 251 58.6
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 5.3e-70 268.5 249 55.8
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 6.9e-70 268.1 250 56.8
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 9.9e-69 264.2 249 56.2
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 1.7e-68 263.5 250 56.8
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 1.1e-67 260.8 246 56.9
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 3.2e-67 259.2 246 56.5
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 3.2e-67 259.2 246 56.1
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 5.5e-67 258.5 253 58.9
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 1.2e-66 257.3 246 55.7
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 1.2e-66 257.3 246 55.7
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 1.2e-66 257.3 250 55.2
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 2.1e-66 256.5 248 55.6
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 2.7e-66 256.1 246 56.5
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 2.7e-66 256.1 246 56.1
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 7.9e-66 254.6 246 56.1
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 1.0e-65 254.2 270 52.2
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 1.0e-65 254.2 250 56.0
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 3.0e-65 252.7 244 55.3
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 3.9e-65 252.3 240 55.0
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 6.7e-65 251.5 246 56.5
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 6.7e-65 251.5 244 55.7
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 2.5e-64 249.6 244 53.3
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 2.1e-63 246.5 251 54.2
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 2.8e-63 246.1 264 51.9
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 8.1e-63 244.6 251 54.6
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 1.1e-62 244.2 245 54.3
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 1.5e-61 240.4 249 53.4
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 2.6e-61 239.6 248 55.6
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 2.6e-61 239.6 245 51.8
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 2.2e-60 236.5 248 54.0
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 2.2e-60 236.5 214 57.5
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 8.4e-60 234.6 253 54.9
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 1.9e-59 233.4 239 51.0
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 4.2e-59 232.3 227 53.7
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 4.2e-59 232.3 238 52.5
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 3.5e-58 229.2 247 54.3
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 6.0e-58 228.4 227 53.3
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 1.9e-56 223.4 295 45.8
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 4.8e-55 218.8 255 50.6
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 8.2e-55 218.0 195 58.5
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 3.1e-54 216.1 246 50.4
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 4.5e-53 212.2 226 52.7
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 1.0e-52 211.1 248 49.6
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 6.1e-50 201.8 256 45.7
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 2.5e-48 196.4 202 53.0
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 2.2e-47 193.4 259 47.5
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 4.8e-47 192.2 272 43.0
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 8.2e-47 191.4 201 55.2
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 1.1e-46 191.0 246 43.5
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 5.3e-46 188.7 197 52.3
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 6.9e-46 188.3 244 46.3
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 6.5e-44 181.8 244 44.7
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.4e-43 180.6 244 45.5
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 1.5e-40 170.6 246 40.7
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 6.3e-39 165.2 237 43.0
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 1.0e-36 157.9 143 57.3
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 2.2e-36 156.8 145 57.2
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 2.9e-36 156.4 244 41.0
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 5.0e-36 155.6 145 58.6
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 4.2e-35 152.5 147 58.5
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 3.0e-33 146.4 126 58.7
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 2.6e-32 143.3 119 63.0
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 1.3e-28 131.0 118 60.2
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 3.2e-27 126.3 126 51.6
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 9.1e-22 108.2 134 43.3
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.1e-18 97.1 169 39.6
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 2.7e-18 96.7 78 59.0
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 4.0e-17 92.8 70 68.6
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 6.8e-17 92.0 242 26.9
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 6.3e-15 85.5 108 44.4
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-14 84.0 101 48.5
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 1.9e-11 73.9 261 24.5
vmacro20809 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 1.2e-10 71.2 55 61.8
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 2.1e-10 70.5 73 49.3
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 4.0e-09 66.2 66 50.0
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 2.6e-08 63.5 61 52.5
Actinidia07549 Actinidia chinensis HOM05D007474 ORTHO05D009367 2.2e-07 60.5 47 59.6
Eucgr.C00104 Eucalyptus grandis HOM05D007474 ORTHO05D009367 2.8e-07 60.1 57 52.6


User provided reference genes

Program Settings