Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.8e-156 555.8 273 100.0
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 5.4e-153 544.3 273 98.2
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.5e-147 526.2 279 93.5
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 4.5e-139 498.0 340 76.2
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 3.4e-131 471.9 356 70.8
FAN12G3853 Fragaria x ananassa HOM05D003864 ORTHO05D004658 5.1e-119 431.4 271 81.9
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 1.4e-108 396.7 343 63.3
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 1.4e-105 386.7 323 64.4
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 3.3e-94 349.0 381 53.5
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 1.1e-92 344.0 255 66.3
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 8.5e-90 334.3 338 53.6
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 3.2e-89 332.4 297 57.2
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 1.2e-88 330.5 339 53.1
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 1.8e-87 326.6 300 56.3
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 3.0e-87 325.9 345 52.8
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 5.2e-87 325.1 292 58.2
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 5.2e-87 325.1 337 52.8
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 5.2e-87 325.1 297 56.9
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 2.0e-86 323.2 296 56.1
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 2.0e-86 323.2 298 56.4
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 2.0e-86 323.2 296 56.4
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 2.0e-86 323.2 337 52.5
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 2.6e-86 322.8 299 56.5
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 7.5e-86 321.2 272 59.6
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 1.3e-85 320.5 306 55.2
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 3.7e-85 318.9 292 57.5
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 1.1e-84 317.4 343 51.3
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 1.4e-84 317.0 335 51.3
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 2.4e-84 316.2 320 53.1
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 3.1e-84 315.8 303 56.4
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 4.1e-84 315.5 292 56.2
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 7.0e-84 314.7 337 52.2
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 7.0e-84 314.7 305 54.1
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 9.1e-84 314.3 295 56.6
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 1.2e-83 313.9 292 56.2
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 2.0e-83 313.2 313 53.0
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 4.5e-83 312.0 334 51.2
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 5.9e-83 311.6 334 51.2
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 7.7e-83 311.2 273 58.6
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 1.7e-82 310.1 322 51.2
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 1.7e-82 310.1 271 57.9
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 2.9e-82 309.3 298 54.7
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 3.8e-82 308.9 315 53.0
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 3.8e-82 308.9 328 52.4
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 3.8e-82 308.9 246 62.6
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 1.1e-81 307.4 275 56.0
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 1.1e-81 307.4 342 50.0
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 4.2e-81 305.4 305 55.1
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 4.2e-81 305.4 291 57.0
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 1.6e-80 303.5 268 57.1
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 2.1e-80 303.1 299 53.2
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 2.1e-80 303.1 285 55.8
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 1.0e-79 300.8 302 55.3
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 1.0e-79 300.8 283 55.1
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 1.4e-79 300.4 288 55.9
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 1.4e-79 300.4 300 52.3
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.4e-79 300.4 309 52.4
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 2.3e-79 299.7 265 58.1
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 4.0e-79 298.9 350 46.6
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 8.9e-79 297.7 312 50.6
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 2.0e-78 296.6 295 53.2
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 3.4e-78 295.8 200 67.0
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 3.4e-78 295.8 335 48.1
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 3.4e-78 295.8 331 51.4
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 4.4e-78 295.4 355 46.5
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 4.4e-78 295.4 326 48.8
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 5.7e-78 295.0 246 58.5
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 9.8e-78 294.3 279 55.2
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 1.3e-77 293.9 290 53.1
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 2.2e-77 293.1 354 46.3
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 2.8e-77 292.7 266 55.6
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 2.8e-77 292.7 287 53.3
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 2.8e-77 292.7 322 50.0
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 6.3e-77 291.6 295 51.2
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 1.8e-76 290.0 311 52.7
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 2.4e-76 289.7 340 47.1
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 2.4e-76 289.7 305 50.2
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 2.4e-76 289.7 295 53.6
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 3.2e-76 289.3 300 50.0
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 4.1e-76 288.9 292 53.4
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 4.1e-76 288.9 359 48.5
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 4.1e-76 288.9 325 48.6
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 5.4e-76 288.5 285 55.4
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 5.4e-76 288.5 332 47.0
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 1.6e-75 287.0 285 54.7
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 1.6e-75 287.0 306 51.0
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 4.5e-75 285.4 321 50.2
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 4.5e-75 285.4 254 55.9
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 4.5e-75 285.4 344 46.8
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 5.9e-75 285.0 292 52.4
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 5.9e-75 285.0 284 52.1
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 5.9e-75 285.0 295 53.6
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 7.8e-75 284.6 292 52.4
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 1.0e-74 284.3 292 53.8
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 1.3e-74 283.9 266 54.1
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 1.7e-74 283.5 261 57.1
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 2.3e-74 283.1 297 51.9
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 2.3e-74 283.1 317 47.6
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 2.9e-74 282.7 320 48.1
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 2.9e-74 282.7 309 50.8
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 2.9e-74 282.7 312 50.6
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 2.9e-74 282.7 332 48.8
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 3.9e-74 282.3 328 48.8
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 5.0e-74 282.0 298 52.3
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 8.6e-74 281.2 271 53.1
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 1.9e-73 280.0 294 53.7
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 5.6e-73 278.5 299 50.5
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 7.3e-73 278.1 321 47.7
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.2e-72 277.3 302 49.7
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 1.6e-72 276.9 318 48.1
Dinv38324 Davidia involucrata HOM05D003864 ORTHO05D004658 2.1e-72 276.6 341 48.1
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 2.1e-72 276.6 291 52.2
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 3.6e-72 275.8 308 50.3
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 3.6e-72 275.8 310 48.7
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 8.0e-72 274.6 304 48.4
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 1.0e-71 274.2 285 52.3
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 1.4e-71 273.9 295 50.8
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 2.3e-71 273.1 263 55.1
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 3.1e-71 272.7 276 50.7
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 4.0e-71 272.3 300 51.3
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 5.2e-71 271.9 308 46.4
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 8.9e-71 271.2 309 50.2
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 8.9e-71 271.2 314 48.7
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 1.5e-70 270.4 300 47.0
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 5.8e-70 268.5 263 51.7
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 3.7e-69 265.8 310 46.1
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 4.3e-65 252.3 307 45.9
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 1.9e-60 236.9 317 45.4
QL06p007391 Quercus lobata HOM05D003864 ORTHO05D004658 1.9e-60 236.9 192 60.9
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 2.1e-59 233.4 254 49.6
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 4.6e-59 232.3 227 52.4
Dinv44425 Davidia involucrata HOM05D003864 ORTHO05D004658 3.7e-53 212.6 144 70.1
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 1.1e-52 211.1 260 43.8
MBI19_g44903_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 4.1e-52 209.1 235 46.8
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 6.0e-51 205.3 262 40.5
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 1.1e-49 201.1 282 39.7
Solyc06g054530.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 9.6e-49 198.0 143 66.4
BolC3t14979H Brassica oleracea HOM05D003864 ORTHO05D004658 2.8e-48 196.4 163 62.6
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 2.8e-48 196.4 258 38.0
SalBow2G1899 Salvia bowleyana HOM05D003864 ORTHO05D004658 8.1e-48 194.9 202 53.0
Sopen01g029580 Solanum pennellii HOM05D003864 ORTHO05D004658 1.1e-47 194.5 161 59.6
Psat7g088240 Pisum sativum HOM05D003864 ORTHO05D004658 1.4e-47 194.1 188 53.7
Sopen06g019600 Solanum pennellii HOM05D003864 ORTHO05D004658 1.8e-47 193.7 143 65.0
HanXRQChr13g0411231 Helianthus annuus HOM05D003864 ORTHO05D004658 6.8e-47 191.8 186 53.8
PGSC0003DMG400010656 Solanum tuberosum HOM05D003864 ORTHO05D004658 6.8e-47 191.8 136 66.9
CDE12G0924 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 3.0e-42 176.4 116 67.2
Sc25g0004750 Simmondsia chinensis HOM05D003864 ORTHO05D004658 1.5e-41 174.1 206 48.5
unitig_748.g8369 Utricularia gibba HOM05D000472 ORTHO05D000344 2.5e-41 173.3 150 55.3
SMO356G0587 Selaginella moellendorffii HOM05D003864 ORTHO05D004658 2.4e-39 166.8 263 37.3
CBR_g37156 Chara braunii HOM05D003864 ORTHO05D004658 9.0e-39 164.9 295 33.2
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 2.2e-37 160.2 178 47.8
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 2.2e-37 160.2 178 47.8
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 2.1e-35 153.7 182 46.2
CSS0003637 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 3.9e-34 149.4 93 71.0
CSS0011053 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 3.9e-34 149.4 93 71.0
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 4.3e-33 146.0 166 47.6
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 6.2e-32 142.1 82 78.0
SEGI_31487 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 7.6e-30 135.2 90 64.4
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 1.7e-29 134.0 87 69.0
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 8.4e-29 131.7 83 73.5
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 8.4e-29 131.7 83 74.7
RcHm_v2.0_Chr4g0421071 Rosa chinensis HOM05D003864 ORTHO05D004658 1.8e-26 124.0 96 67.7
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 3.0e-26 123.2 83 72.3
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 8.7e-26 121.7 77 71.4
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 9.6e-25 118.2 93 54.8
SEGI_14152 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 2.4e-23 113.6 110 46.4
MCO15G076 Micromonas commoda HOM05D003864 ORTHO05D004658 5.3e-23 112.5 260 26.9
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 6.9e-23 112.1 60 88.3
MSTRG.21813 Avicennia marina HOM05D003864 ORTHO05D004658 2.6e-22 110.2 69 69.6
BolC4t22460H Brassica oleracea HOM05D003864 ORTHO05D004658 2.9e-21 106.7 71 70.4
Actinidia25721 Actinidia chinensis HOM05D003864 ORTHO05D004658 4.9e-21 105.9 60 71.7
CSS0041699 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.1e-20 104.8 59 72.9
Cre13.g608000 Chlamydomonas reinhardtii HOM05D003864 ORTHO05D004658 7.1e-20 102.1 300 28.0
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 6.2e-16 89.0 50 78.0
PRCOL_00006073 Prasinoderma coloniale HOM05D003864 ORTHO05D004658 3.1e-15 86.7 364 22.8
Zm00001eb400060 Zea mays HOM05D003864 ORTHO05D004658 6.1e-11 72.4 51 68.6
Dinv02075 Davidia involucrata HOM05D003864 ORTHO05D035062 6.7e-10 68.9 55 58.2
Dinv08007 Davidia involucrata HOM05D003864 ORTHO05D035062 3.3e-09 66.6 53 58.5
CSS0047531 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D112748 1.2e-06 58.2 57 59.6


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