Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.1e-150 534.6 258 100.0
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.4e-144 514.6 258 95.7
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 1.5e-136 489.6 258 92.6
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.3e-135 486.5 258 92.2
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.8e-129 463.8 233 96.1
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.4e-126 456.4 246 89.0
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 7.3e-107 391.0 245 79.2
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 2.9e-103 379.0 189 94.2
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.9e-97 357.5 231 77.1
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 5.1e-92 341.7 242 73.6
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 8.1e-74 281.2 252 56.0
FvH4_2g38461 Fragaria vesca HOM05D007529 ORTHO05D007451 4.0e-73 278.9 181 79.0
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 7.1e-70 268.1 247 57.9
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 5.6e-67 258.5 249 51.0
FAN12G3498 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.8e-66 256.1 159 81.8
FvH4_4g15602 Fragaria vesca HOM05D007529 ORTHO05D007451 9.0e-65 251.1 159 81.1
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 2.2e-63 246.5 256 50.0
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 7.1e-62 241.5 246 51.6
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 2.7e-61 239.6 259 47.9
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 1.0e-60 237.7 257 48.6
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 8.7e-60 234.6 258 49.2
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 8.7e-60 234.6 266 47.4
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 1.5e-59 233.8 266 47.4
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 9.6e-59 231.1 252 48.0
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 1.8e-57 226.9 257 46.7
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 2.4e-57 226.5 259 48.6
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 9.0e-57 224.6 247 49.4
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 1.2e-56 224.2 256 46.1
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 1.2e-56 224.2 245 46.9
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 3.4e-56 222.6 255 45.9
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 3.4e-56 222.6 260 44.2
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 3.4e-56 222.6 264 45.5
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 7.6e-56 221.5 254 46.5
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.3e-55 220.7 259 42.9
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 8.4e-55 218.0 259 46.7
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 1.1e-54 217.6 255 47.1
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 1.4e-54 217.2 251 49.4
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 1.4e-54 217.2 257 44.4
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 1.9e-54 216.9 249 43.8
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 3.2e-54 216.1 267 44.2
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 4.2e-54 215.7 218 48.6
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 5.5e-54 215.3 260 45.8
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 9.3e-54 214.5 251 48.2
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.2e-53 214.2 259 42.1
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.2e-53 214.2 257 45.5
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 1.6e-53 213.8 278 44.6
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 3.5e-53 212.6 257 45.9
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 3.5e-53 212.6 248 46.8
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 4.6e-53 212.2 251 47.4
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 4.6e-53 212.2 239 45.2
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 1.0e-52 211.1 218 49.1
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 1.0e-52 211.1 278 44.2
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 1.9e-51 206.8 243 45.3
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 7.4e-51 204.9 252 44.0
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 1.3e-50 204.1 279 41.9
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 4.8e-50 202.2 251 44.2
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 1.1e-49 201.1 282 40.4
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 3.1e-49 199.5 264 42.4
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 4.5e-48 195.7 250 42.4
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 7.6e-48 194.9 269 42.4
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 1.0e-47 194.5 250 43.2
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 9.3e-46 188.0 113 82.3
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 2.3e-44 183.3 268 38.1
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 3.9e-44 182.6 208 47.1
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 5.1e-44 182.2 248 41.1
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 1.1e-43 181.0 254 42.1
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 1.5e-43 180.6 265 37.7
Sabra04G0050900 Salix brachista HOM05D007529 ORTHO05D007451 2.4e-41 173.3 223 42.2
FAN22G2112 Fragaria x ananassa HOM05D007529 ORTHO05D007451 9.0e-41 171.4 86 93.0
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 1.3e-39 167.5 262 38.5
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 5.0e-39 165.6 211 43.1
FAN17G0844 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.2e-38 162.9 96 82.3
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 5.5e-38 162.2 254 38.2
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 2.7e-37 159.8 257 40.1
Aqoxy7G01198 Aquilegia oxysepala HOM05D007529 ORTHO05D007451 7.9e-37 158.3 217 40.6
Haze_19770 Corylus avellana HOM05D007529 ORTHO05D007451 8.8e-36 154.8 169 48.5
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 9.7e-35 151.4 251 37.5
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 2.4e-33 146.7 245 34.7
Nn1g04791 Nelumbo nucifera HOM05D007529 ORTHO05D007451 3.8e-31 139.4 261 36.0
CiPaw.09G042800 Carya illinoinensis HOM05D007529 ORTHO05D007451 3.2e-30 136.3 254 38.2
Potri.004G077301 Populus trichocarpa HOM05D007529 ORTHO05D007451 4.2e-30 136.0 153 46.4
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.4e-28 131.0 269 33.8
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 8.8e-28 128.3 167 42.5
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 2.4e-25 120.2 155 43.2
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 1.2e-24 117.9 246 30.1
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 2.6e-24 116.7 126 46.0
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 1.7e-23 114.0 246 29.7
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.7e-23 114.0 176 39.2
CDE11G0566 Ceratophyllum demersum HOM05D007529 ORTHO05D007451 2.2e-23 113.6 167 35.3
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 1.1e-22 111.3 247 32.0
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 4.2e-22 109.4 248 32.3
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 4.2e-22 109.4 247 32.4
Nitab4.5_0000826g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 6.1e-21 105.5 162 39.5
Nn1g01084 Nelumbo nucifera HOM05D007529 ORTHO05D007451 4.0e-20 102.8 114 44.7
AUR62026141 Chenopodium quinoa HOM05D007529 ORTHO05D007451 7.5e-19 98.6 132 39.4
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 3.7e-18 96.3 265 30.2
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 4.8e-18 95.9 269 30.1
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 7.0e-17 92.0 183 32.2
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 1.6e-16 90.9 140 33.6
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.2e-15 87.0 181 31.5
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 8.5e-15 85.1 179 31.8
SMO340G0132 Selaginella moellendorffii HOM05D027965 ORTHO05D007451 8.5e-15 85.1 301 25.6
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 2.5e-14 83.6 182 31.9
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 3.2e-14 83.2 178 30.3
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 5.5e-14 82.4 250 29.2
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 9.4e-14 81.6 179 30.7
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 9.4e-14 81.6 180 32.8
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.1e-13 80.5 182 30.8
Cpa.g.sc5.217 Carica papaya HOM05D007529 ORTHO05D007451 2.7e-13 80.1 87 42.5
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 3.6e-13 79.7 179 29.6
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 3.6e-13 79.7 180 31.7
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 3.6e-13 79.7 179 29.6
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 6.1e-13 79.0 182 30.8
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 1.4e-12 77.8 180 32.2
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.4e-12 77.8 178 32.0
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 2.3e-12 77.0 260 26.5
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 5.2e-12 75.9 179 29.6
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 5.2e-12 75.9 155 33.5
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 5.2e-12 75.9 155 33.5
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 6.8e-12 75.5 152 32.9
BolC8t51531H Brassica oleracea HOM05D005503 ORTHO05D007451 2.0e-11 73.9 153 32.7
AagrBONN_evm.TU.Sc2ySwM_368.1069 Anthoceros agrestis HOM05D027965 ORTHO05D007451 2.6e-11 73.6 284 23.6
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 7.5e-11 72.0 179 26.8
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 7.5e-11 72.0 179 26.8
MELO3C014210.2 Cucumis melo HOM05D007529 ORTHO05D007451 9.8e-11 71.6 77 44.2
Mapoly0033s0082 Marchantia polymorpha HOM05D027965 ORTHO05D048753 1.3e-10 71.2 264 27.7
CsaV3_4G021970 Cucumis sativus L. HOM05D007529 ORTHO05D007451 2.8e-10 70.1 75 42.7
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 3.7e-10 69.7 179 29.1
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 3.7e-10 69.7 179 29.1
ClCG04G003940 Citrullus lanatus HOM05D007529 ORTHO05D007451 1.8e-09 67.4 84 41.7
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 1.3e-07 61.2 111 33.3
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 1.7e-07 60.8 143 28.7
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 3.2e-06 56.6 111 32.4
Mapoly0009s0128 Marchantia polymorpha HOM05D027965 ORTHO05D048753 3.2e-06 56.6 266 26.3
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 5.5e-06 55.8 102 31.4


User provided reference genes

Program Settings