Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0620 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.0e-108 394.4 197 100.0
FvH4_4g11860 Fragaria vesca HOM05D003861 ORTHO05D003172 9.8e-96 353.6 186 95.7
FAN05G0636 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.2e-94 348.6 186 94.6
FAN11G3391 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.2e-94 348.6 186 94.6
FAN21G1384 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.2e-94 348.6 186 94.6
FAN20G3207 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.1e-94 348.2 186 94.6
FAN24G3411 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.0e-94 347.4 186 94.6
FvH4_4g07540 Fragaria vesca HOM05D003861 ORTHO05D003172 1.2e-93 346.7 186 94.1
FAN19G1774 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-93 346.3 186 94.1
FAN08G0030 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-93 345.5 186 94.1
FAN12G0494 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-93 345.5 186 93.5
FAN12G1335 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-93 345.5 186 93.5
FAN18G3238 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-93 345.5 186 94.1
FAN20G1736 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-93 345.5 186 94.1
FAN25G1915 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-93 345.5 186 94.1
FAN26G2524 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-93 345.5 186 94.1
FAN28G1231 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.7e-93 345.5 186 94.1
FAN08G0306 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.5e-93 345.1 186 94.1
FAN09G4198 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.6e-93 344.7 183 95.1
FAN18G0257 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.0e-93 344.4 186 93.5
FAN05G5297 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-92 343.2 186 93.5
FAN06G2497 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-92 343.2 186 93.5
FAN05G2260 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.7e-92 342.8 186 93.5
FAN22G1234 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.7e-92 342.8 183 94.5
FAN20G2009 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.3e-92 342.4 186 93.5
FAN19G0585 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-91 340.1 186 93.0
FAN04G0957 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.9e-89 330.5 179 94.4
FvH4_4g14180 Fragaria vesca HOM05D003861 ORTHO05D003172 2.0e-88 329.3 175 94.3
FAN20G0509 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.5e-85 318.5 175 92.6
FAN05G1504 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.3e-79 297.4 175 88.0
FAN06G2077 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-73 280.0 153 94.8
FAN25G3807 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-73 280.0 153 94.8
FAN12G1269 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.9e-71 272.3 184 77.7
FAN10G4063 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-69 266.5 147 93.9
FAN04G2066 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.1e-65 252.3 145 88.3
FAN26G3319 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.3e-60 236.1 137 91.2
FAN21G1959 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.3e-59 231.1 140 87.1
FAN23G2209 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-56 223.4 148 83.8
FAN25G1362 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.5e-53 212.2 120 93.3
RcHm_v2.0_Chr1g0362621 Rosa chinensis HOM05D000234 ORTHO05D000335 3.5e-53 212.2 172 62.8
FAN19G1462 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.3e-51 205.7 202 56.9
FAN28G2185 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.4e-49 199.5 164 68.3
FAN01G2986 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.2e-46 189.1 159 71.7
FAN17G0616 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.5e-45 185.7 96 93.8
FvH4_4g24130 Fragaria vesca HOM05D003861 ORTHO05D003172 1.3e-42 177.2 170 58.8
FAN06G2716 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-42 177.2 186 54.8
FAN27G3227 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-42 177.2 122 82.8
FAN18G3004 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.1e-41 172.6 89 92.1
FvH4_7g08131 Fragaria vesca HOM05D003861 ORTHO05D003172 5.3e-41 171.8 105 86.7
FvH4_7g07670 Fragaria vesca HOM05D003861 ORTHO05D003172 9.0e-41 171.0 180 54.4
FAN16G1856 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.7e-36 154.8 86 88.4
FAN22G1000 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.5e-35 152.9 85 87.1
FAN18G1278 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.7e-34 149.1 189 47.1
FvH4_5g34730 Fragaria vesca HOM05D003861 ORTHO05D003172 1.8e-33 146.7 193 45.6
FAN10G2310 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.4e-33 146.4 76 88.2
FAN17G1628 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.9e-33 144.8 74 90.5
FAN21G0339 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.9e-33 144.8 110 68.2
FAN10G2421 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.0e-33 144.4 187 46.5
FvH4_7g00330 Fragaria vesca HOM05D003861 ORTHO05D003172 1.2e-32 144.1 193 44.6
FAN01G2695 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-32 143.7 187 46.5
FAN05G2007 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.6e-32 142.9 100 78.0
FvH4_5g38071 Fragaria vesca HOM05D003861 ORTHO05D003172 2.9e-31 139.4 79 91.1
FAN21G2358 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-30 137.1 193 43.5
FAN27G1601 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.5e-30 135.2 187 41.2
FAN17G1023 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.1e-29 133.3 156 49.4
FAN18G2614 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.1e-29 131.7 80 86.2
FAN27G0961 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.1e-29 131.7 193 43.0
FAN23G1712 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.1e-28 128.6 183 43.7
FAN15G3220 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.7e-28 128.3 162 46.3
FAN02G2656 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.4e-27 124.8 60 93.3
FAN11G3742 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.8e-26 122.9 166 44.6
FAN27G0919 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.9e-25 118.2 82 80.5
FvH4_5g15962 Fragaria vesca HOM05D003861 ORTHO05D003172 3.4e-24 115.9 139 46.8
FAN25G0014 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.4e-24 115.9 158 44.3
FAN06G1710 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.9e-24 115.2 72 87.5
FAN25G1015 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.9e-24 115.2 78 80.8
FAN18G3027 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.7e-24 114.8 171 43.3
FAN14G1188 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-23 114.0 143 46.9
FAN10G3747 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-22 110.9 66 90.9
FAN12G1889 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-22 110.2 153 43.8
FAN04G1737 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.2e-22 109.4 165 40.6
FAN08G2583 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.2e-22 109.4 180 42.2
FAN20G0681 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.2e-22 109.0 187 34.8
FAN01G0757 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.4e-22 107.8 70 82.9
FAN17G0893 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.7e-21 105.5 64 90.6
FAN16G0131 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.4e-20 104.0 86 65.1
FvH4_6g38832 Fragaria vesca HOM05D003861 ORTHO05D003172 1.3e-18 97.4 121 46.3
FAN10G3556 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.7e-18 97.1 121 45.5
FAN05G4694 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.8e-18 95.5 116 44.8
FAN12G4080 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.0e-17 91.7 216 36.6
FAN06G0363 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-16 90.5 192 34.4
FAN21G3203 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.6e-16 89.7 212 34.9
FAN17G0371 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.5e-16 89.0 211 37.0
FAN08G3161 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.7e-16 88.2 101 51.5
FAN14G4213 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.7e-15 87.0 201 35.8
FAN20G0880 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.2e-15 86.7 106 49.1
FAN19G2996 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.9e-15 86.3 149 36.2
FAN14G5172 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-14 84.0 115 45.2
FAN16G2032 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-14 84.0 123 39.0
FAN14G4732 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.5e-14 83.2 193 36.3
FAN19G1866 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.5e-14 83.2 211 34.1
FAN03G0767 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-13 80.5 219 33.8
FAN04G1565 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-13 80.5 213 34.7
FAN17G2131 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-13 80.5 219 33.8
FAN20G1013 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-13 80.5 99 49.5
FAN24G0231 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-13 80.5 219 33.8
FAN24G1232 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-13 80.5 219 33.8
FAN26G1201 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-13 80.5 219 33.8
FAN27G1644 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.6e-13 80.5 219 33.8
FAN14G0173 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.1e-13 80.1 196 34.7
FAN14G1079 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.1e-13 80.1 196 34.7
FAN15G3561 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.7e-13 79.7 209 31.6
FAN07G1005 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.6e-13 79.3 209 31.6
FAN10G0202 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.6e-13 79.3 123 39.0
FAN03G0943 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.7e-13 79.0 209 31.6
FAN03G1903 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.7e-13 79.0 209 31.6
FAN05G3353 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.7e-13 79.0 209 31.6
FAN10G4036 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.7e-13 79.0 209 31.6
FAN11G1400 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.7e-13 79.0 209 31.6
FAN13G3107 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.7e-13 79.0 209 31.6
FAN05G2377 Fragaria x ananassa HOM05D008328 ORTHO05D003172 6.1e-13 78.6 209 31.6
FAN09G0970 Fragaria x ananassa HOM05D008328 ORTHO05D003172 6.1e-13 78.6 209 31.6
FAN14G4695 Fragaria x ananassa HOM05D008328 ORTHO05D003172 6.1e-13 78.6 209 31.6
FAN07G1974 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.0e-12 77.8 209 31.1
FAN08G0036 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.0e-12 77.8 223 31.8
FAN11G1233 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.0e-12 77.8 209 31.1
FAN19G0341 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.0e-12 77.8 223 31.8
FAN21G2808 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.0e-12 77.8 223 31.8
FAN01G0661 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.4e-12 77.4 215 32.1
FAN04G1029 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.4e-12 77.4 209 31.1
FAN14G0103 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.4e-12 77.4 210 31.9
FAN14G4484 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.4e-12 77.4 209 31.6
FAN03G1358 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-12 77.0 215 32.1
FAN08G2218 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-12 77.0 215 32.1
FAN09G4482 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.8e-12 77.0 216 33.8
FAN09G4805 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-12 77.0 215 32.1
FAN11G2179 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-12 77.0 215 32.1
FAN17G3018 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-12 77.0 215 32.1
FAN04G2765 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.3e-12 76.6 206 31.6
FAN04G2813 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.0e-12 76.3 209 31.1
FAN08G1451 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.9e-12 75.9 216 33.3
FAN04G0487 Fragaria x ananassa HOM05D008328 ORTHO05D003172 5.2e-12 75.5 205 31.7
FAN04G1109 Fragaria x ananassa HOM05D008328 ORTHO05D003172 5.2e-12 75.5 209 31.1
FAN12G3947 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.2e-12 75.5 216 33.3
FAN02G1809 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.7e-12 75.1 216 34.3
FAN17G2798 Fragaria x ananassa HOM05D008328 ORTHO05D003172 6.7e-12 75.1 209 30.6
FAN06G2450 Fragaria x ananassa HOM05D003861 ORTHO05D003172 8.8e-12 74.7 208 31.7
FAN19G2630 Fragaria x ananassa HOM05D008328 ORTHO05D003172 8.8e-12 74.7 203 31.5
FAN22G0249 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.5e-11 73.9 216 32.9
FAN27G0540 Fragaria x ananassa HOM05D008328 ORTHO05D003172 2.0e-11 73.6 208 30.8
FAN05G1658 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.3e-11 72.8 90 48.9
FAN05G5569 Fragaria x ananassa HOM05D003861 ORTHO05D003172 3.3e-11 72.8 90 48.9
FAN08G2861 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.3e-11 72.8 204 30.4
FAN17G2028 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.7e-11 72.0 214 33.2
FvH4_4g12252 Fragaria vesca HOM05D003861 ORTHO05D003172 1.3e-10 70.9 104 45.2
FAN09G3129 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-10 70.9 93 44.1
FAN09G4336 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.3e-10 70.9 93 44.1
FAN02G0376 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.7e-10 70.5 194 31.4
FAN15G3175 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.7e-10 70.5 104 46.2
FAN07G0556 Fragaria x ananassa HOM05D008328 ORTHO05D003172 3.7e-10 69.3 194 30.9
FAN19G1677 Fragaria x ananassa HOM05D008328 ORTHO05D003172 6.3e-10 68.6 194 32.5
FAN07G1189 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-09 67.8 216 29.6
FAN08G3244 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.8e-09 67.0 73 52.1
FAN14G4747 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.8e-09 67.0 185 31.9
FAN03G2787 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.0e-09 65.1 105 42.9
RcHm_v2.0_Chr7g0200361 Rosa chinensis HOM05D003861 ORTHO05D003172 1.6e-08 63.9 190 30.0
FAN05G0284 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.6e-08 63.2 73 52.1
FAN18G1703 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.6e-08 63.2 198 31.8
FAN26G1802 Fragaria x ananassa HOM05D003861 ORTHO05D003172 2.6e-08 63.2 216 28.2
FAN09G2774 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.5e-08 62.4 170 32.9
FAN14G1330 Fragaria x ananassa HOM05D008328 ORTHO05D003172 4.5e-08 62.4 179 31.8
FAN25G0615 Fragaria x ananassa HOM05D003861 ORTHO05D003172 4.5e-08 62.4 97 42.3
FvH4_1g14871 Fragaria vesca HOM05D003861 ORTHO05D003172 5.9e-08 62.0 105 41.9
FAN23G2374 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.9e-08 62.0 166 36.1
FAN06G0466 Fragaria x ananassa HOM05D003861 ORTHO05D003172 7.7e-08 61.6 175 35.4
FAN19G2410 Fragaria x ananassa HOM05D008328 ORTHO05D003172 1.3e-07 60.8 128 37.5
DCAR_010251 Daucus carota HOM05D003861 ORTHO05D003172 1.7e-07 60.5 129 34.9
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.2e-07 60.1 186 26.3
FvH4_1g04631 Fragaria vesca HOM05D003861 ORTHO05D003172 6.5e-07 58.5 102 41.2
FAN13G1085 Fragaria x ananassa HOM05D003861 ORTHO05D003172 6.5e-07 58.5 99 39.4
FAN08G1145 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-06 57.8 135 37.8
FAN23G1285 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.1e-06 57.8 156 34.0
FAN13G0814 Fragaria x ananassa HOM05D003861 ORTHO05D003172 1.9e-06 57.0 83 41.0
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.2e-06 55.8 186 25.8
FAN25G2463 Fragaria x ananassa HOM05D003861 ORTHO05D003172 5.5e-06 55.5 154 33.8
FAN13G1126 Fragaria x ananassa HOM05D003861 ORTHO05D003172 9.4e-06 54.7 174 34.5


User provided reference genes

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