Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 4.0e-30 134.0 65 100.0
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 4.0e-30 134.0 65 100.0
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 1.2e-29 132.5 65 98.5
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 2.2e-20 101.7 61 83.6
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 1.3e-17 92.4 61 78.7
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 9.6e-16 86.3 58 77.6
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 1.6e-15 85.5 62 66.1
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 3.7e-15 84.3 61 73.8
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 1.8e-14 82.0 55 74.5
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 1.8e-14 82.0 61 65.6
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.4e-14 81.6 57 68.4
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 4.1e-14 80.9 58 72.4
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 4.1e-14 80.9 57 64.9
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 4.1e-14 80.9 57 64.9
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 9.0e-14 79.7 57 68.4
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 2.6e-13 78.2 59 62.7
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 3.4e-13 77.8 61 62.3
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 4.5e-13 77.4 59 66.1
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 5.9e-13 77.0 57 63.2
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 5.9e-13 77.0 57 63.2
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 5.9e-13 77.0 61 63.9
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 5.9e-13 77.0 57 66.7
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 7.6e-13 76.6 62 67.7
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 1.3e-12 75.9 61 60.7
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.7e-12 75.5 61 60.7
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 1.7e-12 75.5 60 61.7
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 3.8e-12 74.3 61 59.0
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 5.0e-12 73.9 62 66.1
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 6.5e-12 73.6 57 61.4
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 6.5e-12 73.6 61 65.6
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 6.5e-12 73.6 61 65.6
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 6.5e-12 73.6 61 65.6
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 6.5e-12 73.6 58 67.2
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 1.1e-11 72.8 61 59.0
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 1.4e-11 72.4 61 57.4
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 1.4e-11 72.4 61 57.4
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 1.4e-11 72.4 61 57.4
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 1.4e-11 72.4 61 57.4
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 1.4e-11 72.4 61 57.4
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.4e-11 72.4 55 63.6
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 1.4e-11 72.4 61 60.7
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 2.5e-11 71.6 61 59.0
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 4.2e-11 70.9 61 55.7
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 4.2e-11 70.9 61 55.7
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 5.5e-11 70.5 61 57.4
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 7.2e-11 70.1 60 58.3
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 9.3e-11 69.7 59 54.2
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 9.3e-11 69.7 57 63.2
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 9.3e-11 69.7 61 57.4
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 9.3e-11 69.7 57 63.2
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 1.2e-10 69.3 59 54.2
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.2e-10 69.3 57 59.6
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 2.1e-10 68.6 59 57.6
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 2.1e-10 68.6 61 57.4
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.7e-10 68.2 53 62.3
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 3.5e-10 67.8 56 58.9
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 4.6e-10 67.4 61 55.7
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 4.6e-10 67.4 61 55.7
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 4.6e-10 67.4 61 55.7
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 4.6e-10 67.4 61 55.7
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 6.7e-09 63.5 57 57.9
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 6.7e-09 63.5 64 53.1
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 8.7e-09 63.2 59 50.8
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 8.7e-09 63.2 61 54.1
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 8.7e-09 63.2 52 59.6
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 1.1e-08 62.8 60 55.0
Sc19g0005700 Simmondsia chinensis HOM05D006167 ORTHO05D007635 1.1e-08 62.8 60 53.3
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 1.5e-08 62.4 57 57.9
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 1.5e-08 62.4 59 50.8
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 1.5e-08 62.4 57 49.1
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 1.5e-08 62.4 57 49.1
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.9e-08 62.0 60 56.7
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 1.9e-08 62.0 59 49.2
SEGI_07901 Sequoiadendron giganteum HOM05D006167 ORTHO05D007635 1.9e-08 62.0 61 55.7
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 2.5e-08 61.6 65 52.3
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 2.5e-08 61.6 61 55.7
Aqoxy5G00097 Aquilegia oxysepala HOM05D006167 ORTHO05D007635 3.3e-08 61.2 60 56.7
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.3e-08 61.2 45 64.4
Gohir.D09G064700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.3e-08 61.2 57 57.9
Gohir.D11G199000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.3e-08 61.2 57 56.1
Gorai.012G072500 Gossypium raimondii HOM05D006167 ORTHO05D007635 5.7e-08 60.5 61 57.4
Gorai.004G118700 Gossypium raimondii HOM05D006167 ORTHO05D007635 7.4e-08 60.1 57 56.1
Gohir.D04G064600 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.3e-07 59.3 57 57.9
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 1.6e-07 58.9 56 55.4
Gohir.D08G046000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.6e-07 58.9 57 56.1
Gorai.008G094700 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.6e-07 58.9 57 56.1
Gorai.011G088300 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.6e-07 58.9 57 56.1
Gorai.011G155100 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.6e-07 58.9 57 56.1
Phvul.007G232600 Phaseolus vulgaris HOM05D006167 ORTHO05D007635 1.6e-07 58.9 59 50.8
Gohir.D08G110800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.8e-07 58.2 57 54.4
Gorai.009G336300 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.8e-07 58.2 61 54.1
Gorai.008G097400 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.7e-07 57.8 58 56.9
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.7e-07 57.8 58 55.2
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.7e-07 57.8 58 55.2
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.7e-07 57.8 58 55.2
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.7e-07 57.8 58 55.2
Gorai.007G213200 Gossypium raimondii HOM05D006167 ORTHO05D007635 6.3e-07 57.0 57 54.4
Gohir.D05G314750 Gossypium hirsutum HOM05D006167 ORTHO05D007635 8.2e-07 56.6 61 54.1
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 8.2e-07 56.6 70 48.6
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.1e-06 56.2 58 53.4
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.1e-06 56.2 58 53.4
AUR62035353 Chenopodium quinoa HOM05D006167 ORTHO05D007635 1.4e-06 55.8 52 53.8
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 1.8e-06 55.5 59 50.8
Gohir.D01G140700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.1e-06 54.7 61 52.5
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 5.3e-06 53.9 58 50.0
Gohir.D02G123800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 6.9e-06 53.5 61 52.5
Mapoly0016s0086 Marchantia polymorpha HOM05D006167 ORTHO05D007635 6.9e-06 53.5 52 57.7
Sc13g0003020 Simmondsia chinensis HOM05D006167 ORTHO05D007635 9.0e-06 53.1 59 47.5


User provided reference genes

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