Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.1e-96 356.7 187 100.0
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 5.0e-89 331.3 187 91.4
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.2e-87 326.6 187 90.4
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.6e-87 326.2 190 88.9
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 2.2e-84 315.8 191 85.9
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 1.2e-82 310.1 187 86.1
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 6.6e-33 144.8 193 52.8
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 1.7e-28 130.2 198 52.0
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 4.9e-28 128.6 188 53.2
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 7.3e-24 114.8 163 54.0
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 1.4e-19 100.5 118 53.4
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 4.1e-19 99.0 171 40.9
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 1.2e-18 97.4 172 40.1
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 1.2e-18 97.4 124 46.0
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 2.7e-18 96.3 157 43.9
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 3.5e-18 95.9 111 55.0
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 7.8e-18 94.7 114 52.6
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 7.8e-18 94.7 155 43.2
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 1.0e-17 94.4 113 49.6
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 1.0e-17 94.4 158 44.9
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 2.3e-17 93.2 129 49.6
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 2.3e-17 93.2 107 50.5
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 6.6e-17 91.7 108 53.7
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 6.6e-17 91.7 163 41.7
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 8.6e-17 91.3 132 44.7
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 1.9e-16 90.1 113 52.2
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 1.9e-16 90.1 126 48.4
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 3.3e-16 89.4 117 48.7
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 3.3e-16 89.4 104 53.8
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 5.6e-16 88.6 170 42.4
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 7.3e-16 88.2 148 41.9
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 9.5e-16 87.8 112 50.9
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 1.6e-15 87.0 115 49.6
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 1.6e-15 87.0 130 49.2
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 2.1e-15 86.7 128 46.1
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.1e-15 86.7 112 50.9
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 2.1e-15 86.7 112 50.9
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 4.7e-15 85.5 109 50.5
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 4.7e-15 85.5 109 50.5
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 4.7e-15 85.5 109 50.5
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 6.2e-15 85.1 105 52.4
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 8.1e-15 84.7 162 38.9
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 8.1e-15 84.7 170 41.8
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 8.1e-15 84.7 157 40.8
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 1.8e-14 83.6 112 48.2
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 1.8e-14 83.6 171 39.8
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 3.1e-14 82.8 132 42.4
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 5.2e-14 82.0 149 40.9
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 1.2e-13 80.9 111 45.0
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 1.5e-13 80.5 60 66.7
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 2.0e-13 80.1 103 51.5
Glyma.01G030000 Glycine max HOM05D007558 ORTHO05D009245 2.0e-13 80.1 178 38.8
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 2.0e-13 80.1 108 43.5
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 2.6e-13 79.7 143 42.7
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 3.4e-13 79.3 112 50.9
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 9.9e-13 77.8 111 51.4
CANSAT01G1746 Cannabis sativa HOM05D007558 ORTHO05D009245 1.3e-12 77.4 97 56.7
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 2.2e-12 76.6 114 45.6
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 2.9e-12 76.3 106 48.1
VMungo0251G2708 Vigna mungo HOM05D007558 ORTHO05D009245 2.9e-12 76.3 103 43.7
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 4.9e-12 75.5 109 47.7
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 6.4e-12 75.1 120 44.2
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 6.4e-12 75.1 93 49.5
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 8.4e-12 74.7 111 44.1
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 8.4e-12 74.7 140 42.9
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 1.4e-11 73.9 103 47.6
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 1.9e-11 73.6 117 45.3
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 1.9e-11 73.6 135 43.0
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 2.4e-11 73.2 132 39.4
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 2.4e-11 73.2 132 39.4
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 5.4e-11 72.0 137 40.9
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 7.1e-11 71.6 113 46.0
BolC2t08819H Brassica oleracea HOM05D008527 ORTHO05D010701 7.1e-11 71.6 132 39.4
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 7.1e-11 71.6 95 53.7
PGSC0003DMG400027920 Solanum tuberosum HOM05D007558 ORTHO05D009245 7.1e-11 71.6 134 37.3
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 9.2e-11 71.2 140 36.4
Lalb_Chr16g0382221 Lupinus albus HOM05D007558 ORTHO05D009245 2.1e-10 70.1 164 37.2
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 2.1e-10 70.1 116 43.1
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 3.5e-10 69.3 141 39.0
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 6.0e-10 68.6 119 43.7
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 7.8e-10 68.2 115 46.1
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.3e-09 67.4 113 39.8
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.7e-09 67.0 113 39.8
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 3.0e-09 66.2 103 45.6
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 3.9e-09 65.9 62 54.8
Sopen04g014760 Solanum pennellii HOM05D007558 ORTHO05D009245 5.1e-09 65.5 109 39.4
unitig_8.g3152 Utricularia gibba HOM05D007558 ORTHO05D009245 6.6e-09 65.1 109 39.4
MSTRG.2398 Avicennia marina HOM05D007558 ORTHO05D009245 8.6e-09 64.7 108 45.4
AUR62014050 Chenopodium quinoa HOM05D023191 ORTHO05D009245 8.6e-09 64.7 159 31.4
Manes.13G029400 Manihot esculenta HOM05D007558 ORTHO05D009245 1.1e-08 64.3 76 52.6
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 1.5e-08 63.9 110 42.7
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 1.5e-08 63.9 166 33.7
Solyc04g026250.1 Solanum lycopersicum HOM05D007558 ORTHO05D009245 1.5e-08 63.9 114 41.2
Sp5g25540 Schrenkiella parvula HOM05D008527 ORTHO05D010701 1.9e-08 63.5 94 43.6
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 3.3e-08 62.8 69 47.8
unitig_22.g6434 Utricularia gibba HOM05D007558 ORTHO05D009245 5.6e-08 62.0 127 39.4
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 1.2e-07 60.8 174 34.5
BcaC03g15190 Brassica carinata HOM05D008527 ORTHO05D010701 1.2e-07 60.8 96 41.7
Ah.02g129970 Amaranthus hybridus HOM05D023191 ORTHO05D009245 2.1e-07 60.1 182 31.9
Nitab4.5_0005678g0020 Nicotiana tabacum HOM05D020724 ORTHO05D025910 2.1e-07 60.1 142 38.0
C02p27710 Brassica napus HOM05D008527 ORTHO05D010701 2.8e-07 59.7 94 41.5
Sed0023819 Sechium edule HOM05D007558 ORTHO05D009245 2.8e-07 59.7 89 46.1
BcaC08g46489 Brassica carinata HOM05D008527 ORTHO05D010701 3.6e-07 59.3 93 39.8
C06p44320 Brassica napus HOM05D008527 ORTHO05D010701 3.6e-07 59.3 93 39.8
BolC6t39502H Brassica oleracea HOM05D008527 ORTHO05D010701 3.6e-07 59.3 93 39.8
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 6.2e-07 58.5 135 37.0
AUR62005388 Chenopodium quinoa HOM05D023191 ORTHO05D009245 1.8e-06 57.0 148 31.1
Nitab4.5_0000203g0180 Nicotiana tabacum HOM05D020724 ORTHO05D025910 1.8e-06 57.0 144 38.2
AL1G37290 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 3.1e-06 56.2 127 38.6
Migut.L01422 Erythranthe guttata HOM05D007558 ORTHO05D009245 3.1e-06 56.2 57 54.4
A07p36840 Brassica napus HOM05D008527 ORTHO05D010701 4.0e-06 55.8 114 36.0
Eucgr.B03316 Eucalyptus grandis HOM05D007558 ORTHO05D009245 5.2e-06 55.5 104 41.3
Ah.03g132750 Amaranthus hybridus HOM05D023191 ORTHO05D009245 6.8e-06 55.1 61 52.5
BcaB05g24574 Brassica carinata HOM05D008527 ORTHO05D010701 6.8e-06 55.1 84 40.5
BcaB05g24577 Brassica carinata HOM05D008527 ORTHO05D010701 6.8e-06 55.1 84 40.5


User provided reference genes

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