Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0535 Fragaria x ananassa HOM05D000135 ORTHO05D019196 2.3e-28 128.6 89 100.0
FAN17G0474 Fragaria x ananassa HOM05D000135 ORTHO05D019196 3.3e-27 124.8 88 96.6
FAN13G2165 Fragaria x ananassa HOM05D000135 ORTHO05D019196 9.7e-27 123.2 86 97.7
FAN16G3744 Fragaria x ananassa HOM05D000135 ORTHO05D019196 1.3e-26 122.9 85 100.0
FAN18G2689 Fragaria x ananassa HOM05D000135 ORTHO05D019196 2.8e-26 121.7 86 97.7
FAN26G0799 Fragaria x ananassa HOM05D000135 ORTHO05D019196 6.3e-26 120.6 85 97.6
FAN06G1102 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.0e-24 115.5 85 95.3
FAN12G2999 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.0e-24 115.5 86 93.0
FAN21G1664 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.7e-24 115.2 85 94.1
FAN23G1951 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.5e-24 114.8 86 94.2
FAN24G3438 Fragaria x ananassa HOM05D000135 ORTHO05D000203 4.5e-24 114.4 85 94.1
FAN24G3071 Fragaria x ananassa HOM05D000135 ORTHO05D000203 7.7e-24 113.6 84 95.2
FAN20G2801 Fragaria x ananassa HOM05D005731 ORTHO05D000222 9.1e-17 90.1 71 95.8
FAN05G1619 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.3e-15 85.5 71 94.4
FAN11G1946 Fragaria x ananassa HOM05D015405 ORTHO05D000203 2.3e-15 85.5 71 94.4
FAN11G2972 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.3e-15 85.5 71 94.4
FAN18G1822 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.3e-15 85.5 71 94.4
FAN25G2085 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.3e-15 85.5 71 94.4
FAN07G0831 Fragaria x ananassa HOM05D000135 ORTHO05D000203 6.6e-15 84.0 71 93.0
FAN27G1943 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.9e-14 82.4 71 91.5
FAN05G2151 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.5e-14 82.0 71 87.3
FAN08G3664 Fragaria x ananassa HOM05D002325 ORTHO05D000336 4.2e-14 81.3 51 100.0
FAN01G0394 Fragaria x ananassa HOM05D004645 ORTHO05D005693 8.0e-13 77.0 53 92.5
FAN13G0473 Fragaria x ananassa HOM05D000135 ORTHO05D000203 8.0e-13 77.0 53 92.5
FAN27G2783 Fragaria x ananassa HOM05D000135 ORTHO05D019196 2.3e-12 75.5 35 100.0
FAN03G1486 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.7e-10 68.2 34 91.2
FAN16G3292 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.7e-10 68.2 34 91.2
FAN28G2192 Fragaria x ananassa HOM05D000135 ORTHO05D000203 3.7e-10 68.2 34 91.2
FvH4_4g10830 Fragaria vesca HOM05D000135 ORTHO05D000203 1.4e-09 66.2 34 88.2
FAN07G1946 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.4e-09 66.2 34 88.2
FAN17G0225 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.4e-09 66.2 34 88.2
FAN07G2731 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.8e-09 65.9 34 88.2
FAN12G3856 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.8e-09 65.9 34 85.3
RcHm_v2.0_Chr4g0406651 Rosa chinensis HOM05D000135 ORTHO05D000203 1.8e-09 65.9 34 88.2
FAN20G1347 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.4e-09 65.5 34 88.2
FAN28G1087 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.4e-09 65.5 34 88.2
MD13G1272800 Malus domestica HOM05D000135 ORTHO05D000203 4.1e-09 64.7 34 85.3
MD04G1041400 Malus domestica HOM05D000135 ORTHO05D000203 7.0e-09 63.9 34 85.3
Prupe.1G194800 Prunus persica HOM05D000135 ORTHO05D000203 7.0e-09 63.9 34 85.3
FAN08G0585 Fragaria x ananassa HOM05D000135 ORTHO05D000203 7.8e-08 60.5 34 82.4
COL.COLO4_07674 Corchorus olitorius HOM05D000135 ORTHO05D000203 1.7e-07 59.3 34 79.4
QL10p049466 Quercus lobata HOM05D000135 ORTHO05D000203 2.3e-07 58.9 34 76.5
Duzib151G1013 Durio zibethinus HOM05D000135 ORTHO05D000203 2.9e-07 58.5 34 76.5
Ca_20790_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 5.0e-07 57.8 34 76.5
Medtr4g067270 Medicago truncatula HOM05D000135 ORTHO05D000203 5.0e-07 57.8 34 76.5
Psat7g209840 Pisum sativum HOM05D000135 ORTHO05D000203 5.0e-07 57.8 34 76.5
Potri.007G128600 Populus trichocarpa HOM05D000135 ORTHO05D000203 5.0e-07 57.8 34 76.5
Thecc.04G179100 Theobroma cacao HOM05D000135 ORTHO05D000203 5.0e-07 57.8 34 76.5
TPR.G34210 Trifolium pratense HOM05D000135 ORTHO05D000203 5.0e-07 57.8 34 76.5
CSS0038594 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 6.6e-07 57.4 34 76.5
CSS0046428 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 6.6e-07 57.4 34 76.5
ClCG07G015690 Citrullus lanatus HOM05D000135 ORTHO05D000203 6.6e-07 57.4 34 76.5
MELO3C017712.2 Cucumis melo HOM05D000135 ORTHO05D000203 6.6e-07 57.4 34 76.5
CsaV3_4G003420 Cucumis sativus L. HOM05D000135 ORTHO05D000203 6.6e-07 57.4 34 76.5
Dinv44187 Davidia involucrata HOM05D000135 ORTHO05D000203 6.6e-07 57.4 34 76.5
Lj3g0028251 Lotus japonicus HOM05D000135 ORTHO05D000203 6.6e-07 57.4 34 76.5
Hma1.2p1_0847F.1_g227905 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 8.6e-07 57.0 34 76.5
Sabra07G0105100 Salix brachista HOM05D000135 ORTHO05D000203 8.6e-07 57.0 35 71.4
Cfa015171 Carpinus fangiana HOM05D000135 ORTHO05D000203 1.1e-06 56.6 34 73.5
CiPaw.01G099700 Carya illinoinensis HOM05D000135 ORTHO05D000203 1.1e-06 56.6 35 71.4
Haze_01502 Corylus avellana HOM05D000135 ORTHO05D000203 1.1e-06 56.6 34 73.5
MBI11_g23340_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000203 1.1e-06 56.6 34 73.5
Nitab4.5_0002084g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000203 1.1e-06 56.6 34 73.5
Nitab4.5_0006914g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 1.1e-06 56.6 34 73.5
Peaxi162Scf00413g00063 Petunia axillaris HOM05D000135 ORTHO05D000203 1.1e-06 56.6 34 73.5
Rhsim09G0029100 Rhododendron simsii HOM05D000135 ORTHO05D000203 1.5e-06 56.2 34 76.5
Sopen06g029610 Solanum pennellii HOM05D000135 ORTHO05D000203 1.5e-06 56.2 34 73.5
PGSC0003DMG400026914 Solanum tuberosum HOM05D000135 ORTHO05D000203 1.5e-06 56.2 34 73.5
TAR633G0712 Trochodendron aralioides HOM05D000135 ORTHO05D000203 1.5e-06 56.2 35 68.6
Cc03_g12870 Coffea canephora HOM05D000135 ORTHO05D000203 1.9e-06 55.8 34 76.5
Glyma.15G030100 Glycine max HOM05D000135 ORTHO05D000203 1.9e-06 55.8 34 73.5
Hma1.2p1_0324F.1_g125393 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 1.9e-06 55.8 34 76.5
Hma1.2p1_0324F.1_g125420 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 1.9e-06 55.8 34 76.5
Potri.017G029700 Populus trichocarpa HOM05D000135 ORTHO05D000203 2.5e-06 55.5 34 73.5
Cpa.g.sc9.284 Carica papaya HOM05D000135 ORTHO05D000203 3.3e-06 55.1 34 73.5
Dinv22734 Davidia involucrata HOM05D000135 ORTHO05D000203 3.3e-06 55.1 34 70.6
Lj6C29T3 Lonicera japonica HOM05D000135 ORTHO05D000203 3.3e-06 55.1 35 74.3
Rhsim02G0077300 Rhododendron simsii HOM05D000135 ORTHO05D000203 3.3e-06 55.1 34 76.5
VMungo1080G0313 Vigna mungo HOM05D000135 ORTHO05D000203 3.3e-06 55.1 34 73.5
BcaB01g02518 Brassica carinata HOM05D000135 ORTHO05D000203 4.3e-06 54.7 35 65.7
Eucgr.H00370 Eucalyptus grandis HOM05D000135 ORTHO05D000203 4.3e-06 54.7 34 73.5
Lj3P181T31 Lonicera japonica HOM05D000135 ORTHO05D000203 4.3e-06 54.7 34 73.5
Lj3P188T13 Lonicera japonica HOM05D000135 ORTHO05D000203 4.3e-06 54.7 34 73.5
Lalb_Chr24g0396851 Lupinus albus HOM05D000135 ORTHO05D000203 4.3e-06 54.7 34 73.5
Oeu034458.1 Olea europaea HOM05D000135 ORTHO05D000203 4.3e-06 54.7 34 73.5
Peaxi162Scf01052g00031 Petunia axillaris HOM05D000135 ORTHO05D000203 4.3e-06 54.7 35 68.6
Migut.G01083 Erythranthe guttata HOM05D000135 ORTHO05D000203 5.6e-06 54.3 34 70.6
Phvul.005G152900 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 5.6e-06 54.3 34 73.5
Sp6g03330 Schrenkiella parvula HOM05D000135 ORTHO05D000203 5.6e-06 54.3 35 65.7
TWI63G1094 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 5.6e-06 54.3 34 73.5
Duzib268G1408 Durio zibethinus HOM05D000135 ORTHO05D000203 7.3e-06 53.9 34 70.6
Oeu053828.1 Olea europaea HOM05D000135 ORTHO05D000203 7.3e-06 53.9 35 71.4
Duzib212G0491 Durio zibethinus HOM05D000135 ORTHO05D000203 9.5e-06 53.5 34 70.6
ECA240G3776 Erigeron canadensis HOM05D004190 ORTHO05D000203 9.5e-06 53.5 34 64.7
Gohir.A02G012700 Gossypium hirsutum HOM05D000135 ORTHO05D000203 9.5e-06 53.5 34 64.7
Gorai.005G016900 Gossypium raimondii HOM05D000135 ORTHO05D000203 9.5e-06 53.5 34 64.7
Nn3g20143 Nelumbo nucifera HOM05D000135 ORTHO05D000203 9.5e-06 53.5 34 67.6
PSO675G0541 Papaver somniferum HOM05D000135 ORTHO05D000203 9.5e-06 53.5 34 67.6
PSO732G0454 Papaver somniferum HOM05D000135 ORTHO05D000203 9.5e-06 53.5 34 67.6
TAR362G0223 Trochodendron aralioides HOM05D000135 ORTHO05D000203 9.5e-06 53.5 34 67.6


User provided reference genes

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