Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.6e-111 404.8 193 100.0
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.7e-66 255.8 186 71.5
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 6.7e-65 251.1 186 70.4
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 5.7e-56 221.5 186 62.9
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 8.8e-49 197.6 186 52.2
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 7.5e-48 194.5 186 53.8
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.3e-47 193.7 184 54.9
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 6.3e-47 191.4 184 53.3
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.6e-45 186.8 191 53.4
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 2.7e-45 186.0 181 55.8
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 7.7e-45 184.5 186 52.2
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 1.3e-44 183.7 187 49.7
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 2.2e-44 183.0 209 47.8
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 3.8e-44 182.2 187 48.7
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 1.9e-43 179.9 211 46.9
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 2.5e-43 179.5 187 49.7
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 4.2e-43 178.7 187 48.7
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 4.2e-43 178.7 199 48.7
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 7.2e-43 177.9 211 46.4
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 9.4e-43 177.6 186 50.5
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 9.4e-43 177.6 160 54.4
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 9.4e-43 177.6 187 48.7
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 9.4e-43 177.6 191 50.8
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 9.4e-43 177.6 187 49.2
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.2e-42 177.2 187 49.2
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.2e-42 177.2 186 50.5
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.2e-42 177.2 186 51.1
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.6e-42 176.8 186 51.1
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 2.1e-42 176.4 187 49.2
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 2.7e-42 176.0 186 49.5
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 3.6e-42 175.6 184 49.5
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 4.7e-42 175.3 187 47.6
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 4.7e-42 175.3 187 47.1
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 4.7e-42 175.3 189 50.3
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 6.1e-42 174.9 186 50.5
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 1.0e-41 174.1 181 49.7
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 1.4e-41 173.7 189 49.7
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.8e-41 173.3 187 47.6
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 2.3e-41 172.9 152 55.3
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 3.0e-41 172.6 187 47.1
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 4.0e-41 172.2 179 53.1
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 8.8e-41 171.0 82 93.9
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 8.8e-41 171.0 82 93.9
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 1.5e-40 170.2 196 47.4
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 2.6e-40 169.5 191 48.2
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 4.4e-40 168.7 184 49.5
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 9.8e-40 167.5 189 48.7
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 9.8e-40 167.5 186 46.8
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 9.8e-40 167.5 189 47.6
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 1.3e-39 167.2 179 48.6
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 3.7e-39 165.6 181 48.1
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 4.9e-39 165.2 186 47.3
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 4.9e-39 165.2 186 47.3
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.1e-38 164.1 187 47.6
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 1.4e-38 163.7 186 46.2
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.4e-38 163.7 189 48.1
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.8e-38 163.3 181 47.0
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 3.1e-38 162.5 186 47.8
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 9.1e-38 161.0 186 44.6
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.2e-37 160.6 183 47.0
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.0e-37 159.8 181 47.0
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 2.7e-37 159.5 191 47.6
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 2.7e-37 159.5 181 46.4
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 2.7e-37 159.5 164 53.0
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 2.7e-37 159.5 186 44.6
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 2.7e-37 159.5 186 46.8
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 5.9e-37 158.3 171 50.9
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 5.9e-37 158.3 174 47.1
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 1.3e-36 157.1 186 45.2
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.7e-36 156.8 186 45.2
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 5.0e-36 155.2 181 45.3
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 2.8e-34 149.4 159 49.7
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 3.6e-34 149.1 163 49.1
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 1.8e-33 146.7 166 48.8
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 1.8e-33 146.7 166 48.8
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 3.0e-33 146.0 99 68.7
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 3.0e-33 146.0 99 68.7
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 3.0e-33 146.0 114 62.3
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 1.5e-32 143.7 168 46.4
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 4.4e-32 142.1 164 47.0
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 1.3e-31 140.6 99 66.7
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 3.7e-31 139.0 167 45.5
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 3.7e-31 139.0 163 49.7
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 6.3e-31 138.3 94 62.8
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 1.1e-30 137.5 173 46.8
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.4e-30 136.3 165 44.2
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 4.1e-30 135.6 167 43.1
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.6e-29 133.7 76 73.7
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 3.5e-29 132.5 73 78.1
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 3.5e-29 132.5 81 71.6
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 5.9e-29 131.7 164 45.1
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 7.8e-29 131.3 99 62.6
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 7.8e-29 131.3 161 46.0
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 7.8e-29 131.3 170 44.1
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.0e-28 131.0 166 44.0
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.7e-28 130.2 75 73.3
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 2.3e-28 129.8 98 62.2
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 2.3e-28 129.8 181 42.5
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 2.3e-28 129.8 166 44.0
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 2.9e-28 129.4 94 66.0
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 3.9e-28 129.0 166 44.0
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 6.6e-28 128.3 192 35.9
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 8.6e-28 127.9 107 57.9
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 1.9e-27 126.7 162 42.6
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 2.5e-27 126.3 163 42.9
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 4.3e-27 125.6 157 45.2
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 9.5e-27 124.4 162 42.6
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 2.8e-26 122.9 89 68.5
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 8.9e-25 117.9 99 58.6
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 1.6e-21 107.1 76 69.7
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 2.0e-21 106.7 162 40.7
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.7e-20 103.6 74 64.9
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 2.3e-20 103.2 69 72.5
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 6.6e-20 101.7 131 43.5
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.9e-19 100.1 141 41.8
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 4.3e-19 99.0 97 52.6
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 6.2e-18 95.1 53 75.5
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 1.8e-17 93.6 53 73.6
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 2.2e-15 86.7 57 68.4
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 4.9e-15 85.5 175 30.9
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 1.1e-14 84.3 56 71.4
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 1.9e-11 73.6 36 83.3
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 8.1e-10 68.2 54 63.0
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 1.1e-09 67.8 36 75.0
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 3.1e-09 66.2 36 72.2
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 3.4e-08 62.8 42 59.5
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 5.8e-08 62.0 35 71.4
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 1.3e-07 60.8 72 33.3
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 4.9e-07 58.9 183 27.3


User provided reference genes

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