Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0307 Fragaria x ananassa HOM05D004860 ORTHO05D006366 7.1e-77 290.4 138 100.0
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.6e-76 289.3 138 98.6
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 7.9e-76 287.0 138 97.8
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.8e-75 285.8 138 96.4
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 8.7e-75 283.5 138 97.1
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 2.2e-73 278.9 138 93.5
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 1.9e-69 265.8 139 90.6
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 7.2e-69 263.8 139 90.6
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 7.2e-69 263.8 139 89.9
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 2.1e-68 262.3 138 88.4
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 1.0e-67 260.0 139 87.8
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 1.0e-67 260.0 139 87.8
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 1.1e-66 256.5 139 86.3
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 2.5e-66 255.4 139 86.3
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 4.3e-66 254.6 139 85.6
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 9.7e-66 253.4 139 84.9
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 9.7e-66 253.4 139 84.9
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 2.8e-65 251.9 139 84.2
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 3.7e-65 251.5 139 84.2
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 3.7e-65 251.5 139 84.2
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 8.2e-65 250.4 139 84.9
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 8.2e-65 250.4 139 84.2
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 8.2e-65 250.4 139 84.2
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 1.1e-64 250.0 139 84.2
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 1.1e-64 250.0 139 83.5
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 1.1e-64 250.0 139 84.2
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 1.8e-64 249.2 139 83.5
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 1.8e-64 249.2 138 83.3
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 2.4e-64 248.8 139 82.0
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 2.4e-64 248.8 139 81.3
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 4.1e-64 248.1 139 83.5
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 5.3e-64 247.7 139 82.7
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 6.9e-64 247.3 139 84.2
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 9.1e-64 246.9 139 82.7
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 9.1e-64 246.9 139 82.7
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 2.6e-63 245.4 139 82.7
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 3.4e-63 245.0 138 80.4
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 4.5e-63 244.6 138 79.7
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 5.9e-63 244.2 139 81.3
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 7.7e-63 243.8 139 81.3
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 7.7e-63 243.8 139 81.3
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 1.0e-62 243.4 139 81.3
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 1.0e-62 243.4 139 80.6
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 2.2e-62 242.3 139 81.3
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 2.9e-62 241.9 139 79.9
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 2.9e-62 241.9 138 79.7
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 2.9e-62 241.9 138 79.7
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 2.9e-62 241.9 139 81.3
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 3.8e-62 241.5 139 81.3
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 3.8e-62 241.5 139 80.6
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 5.0e-62 241.1 139 79.1
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 5.0e-62 241.1 139 81.3
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 5.0e-62 241.1 139 80.6
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 5.0e-62 241.1 139 81.3
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 6.5e-62 240.7 139 79.1
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 6.5e-62 240.7 139 81.3
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 6.5e-62 240.7 139 81.3
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 1.1e-61 240.0 138 79.0
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 1.4e-61 239.6 139 80.6
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 1.4e-61 239.6 139 79.9
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 2.5e-61 238.8 139 78.4
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 2.5e-61 238.8 139 80.6
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 3.2e-61 238.4 139 79.9
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 3.2e-61 238.4 139 79.9
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 4.2e-61 238.0 139 79.9
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 4.2e-61 238.0 139 79.9
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 4.2e-61 238.0 139 79.9
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 4.2e-61 238.0 139 79.9
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 4.2e-61 238.0 139 79.9
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 4.2e-61 238.0 139 79.9
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 5.5e-61 237.7 139 79.1
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 5.5e-61 237.7 139 79.1
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 7.2e-61 237.3 139 78.4
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 7.2e-61 237.3 139 79.9
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 7.2e-61 237.3 139 79.1
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 7.2e-61 237.3 139 79.9
Eucgr.B01143 Eucalyptus grandis HOM05D004860 ORTHO05D006366 9.4e-61 236.9 139 79.9
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 1.2e-60 236.5 139 79.9
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 1.6e-60 236.1 139 79.9
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 2.1e-60 235.7 139 79.9
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 2.7e-60 235.3 140 81.4
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 2.7e-60 235.3 145 77.2
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 3.6e-60 235.0 139 78.4
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 3.6e-60 235.0 139 79.9
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 6.1e-60 234.2 139 78.4
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 1.0e-59 233.4 139 77.7
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 1.8e-59 232.6 139 79.9
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 1.8e-59 232.6 139 77.7
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 2.3e-59 232.3 139 77.0
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 3.0e-59 231.9 145 76.6
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 3.0e-59 231.9 145 76.6
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 5.1e-59 231.1 139 76.3
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 6.7e-59 230.7 139 77.7
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 8.8e-59 230.3 140 77.9
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 8.8e-59 230.3 139 75.5
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 1.1e-58 229.9 132 84.1
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 1.1e-58 229.9 139 76.3
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 2.0e-58 229.2 139 77.0
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 2.0e-58 229.2 139 77.0
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 2.6e-58 228.8 139 76.3
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 1.4e-56 223.0 139 74.8
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 7.0e-56 220.7 176 61.9
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 9.1e-56 220.3 139 73.4
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 4.5e-55 218.0 130 79.2
Hund22791 Selenicereus undatus HOM05D004860 ORTHO05D006366 4.7e-52 208.0 132 74.2
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 1.0e-51 206.8 139 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 5.2e-51 204.5 138 69.6
VMungo1215G0712 Vigna mungo HOM05D004860 ORTHO05D006366 5.2e-51 204.5 108 82.4
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 3.3e-50 201.8 139 68.3
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 5.7e-50 201.1 122 79.5
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 7.4e-50 200.7 139 71.2
Cc02_g31730 Coffea canephora HOM05D004860 ORTHO05D006366 4.8e-49 198.0 108 80.6
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 5.3e-48 194.5 139 71.2
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 6.5e-46 187.6 139 66.9
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 1.9e-45 186.0 139 66.9
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 2.7e-39 165.6 142 57.7
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 2.9e-38 162.2 131 64.1
Cc09_g08330 Coffea canephora HOM05D004860 ORTHO05D006366 1.9e-37 159.5 112 67.9
Rhsim04G0207200 Rhododendron simsii HOM05D004860 ORTHO05D006366 4.7e-36 154.8 90 82.2
Lj6A565G28 Lonicera japonica HOM05D004860 ORTHO05D006366 3.0e-35 152.1 93 78.5
vmacro08274 Vaccinium macrocarpon HOM05D004860 ORTHO05D006366 6.8e-35 151.0 90 80.0
Nn1g02160 Nelumbo nucifera HOM05D004860 ORTHO05D006366 2.6e-34 149.1 91 78.0
Cc01_g03740 Coffea canephora HOM05D004860 ORTHO05D006366 3.1e-32 142.1 117 60.7
TWI53G0789 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 3.4e-26 122.1 72 79.2
Manes.03G184900 Manihot esculenta HOM05D004860 ORTHO05D006366 4.4e-26 121.7 73 80.8
SHI00370 Sapria himalayana HOM05D004860 ORTHO05D000023 6.3e-25 117.9 77 71.4
ATR0626G115 Amborella trichopoda HOM05D004860 ORTHO05D006366 8.3e-25 117.5 69 82.6
SGA_v2.0_scaffold166G38376 Striga asiatica HOM05D004860 ORTHO05D006366 1.0e-22 110.5 69 76.8
DCAR_002416 Daucus carota HOM05D004860 ORTHO05D006366 1.3e-22 110.2 86 60.5
Actinidia23474 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.3e-22 109.4 87 64.4
CBR_g23274 Chara braunii HOM05D004860 ORTHO05D006366 3.3e-21 105.5 89 53.9
HPP92_027343 Vanilla planifolia HOM05D004860 ORTHO05D006366 2.9e-17 92.4 64 71.9
DCAR_030597 Daucus carota HOM05D004860 ORTHO05D006366 2.4e-16 89.4 52 76.9
Lj6C565T4 Lonicera japonica HOM05D004860 ORTHO05D006366 7.0e-16 87.8 53 69.8
Cc00_g00380 Coffea canephora HOM05D004860 ORTHO05D006366 6.0e-15 84.7 53 71.7
PRCOL_00003006 Prasinoderma coloniale HOM05D004860 ORTHO05D006366 6.6e-14 81.3 134 39.6
Cc11_g00440 Coffea canephora HOM05D004860 ORTHO05D005444 4.4e-10 68.6 37 75.7
Cc04_g14790 Coffea canephora HOM05D004860 ORTHO05D006366 8.6e-06 54.3 29 69.0


User provided reference genes

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