Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0183 Fragaria x ananassa HOM05D011243 ORTHO05D000031 9.2e-79 297.0 166 100.0
FvH4_2g03790 Fragaria vesca HOM05D000030 ORTHO05D000009 6.9e-42 174.5 118 74.6
FvH4_5g12282 Fragaria vesca HOM05D000030 ORTHO05D000009 9.0e-42 174.1 118 74.6
RcHm_v2.0_Chr4g0438211 Rosa chinensis HOM05D000030 ORTHO05D000031 1.6e-30 136.7 118 55.1
FAN17G2136 Fragaria x ananassa HOM05D000030 ORTHO05D000031 4.6e-30 135.2 100 73.0
RcHm_v2.0_Chr3g0468991 Rosa chinensis HOM05D000030 ORTHO05D000031 9.6e-28 127.5 115 53.9
RcHm_v2.0_Chr4g0391921 Rosa chinensis HOM05D000030 ORTHO05D000031 7.6e-25 117.9 114 50.0
FvH4_5g12381 Fragaria vesca HOM05D012654 ORTHO05D000031 7.9e-22 107.8 71 64.8
FvH4_3g31251 Fragaria vesca HOM05D000030 ORTHO05D000031 2.5e-20 102.8 108 46.3
FvH4_7g01741 Fragaria vesca HOM05D000030 ORTHO05D000031 4.3e-20 102.1 108 45.4
FvH4_1g22352 Fragaria vesca HOM05D000030 ORTHO05D000009 2.4e-18 96.3 132 40.2
FvH4_3g04521 Fragaria vesca HOM05D000030 ORTHO05D000031 1.2e-17 94.0 108 44.4
FvH4_5g34031 Fragaria vesca HOM05D000030 ORTHO05D000009 2.2e-16 89.7 156 35.9
FvH4_4g01851 Fragaria vesca HOM05D000030 ORTHO05D000031 1.1e-15 87.4 108 44.4
FvH4_7g17881 Fragaria vesca HOM05D000030 ORTHO05D000009 3.6e-14 82.4 98 41.8
FAN02G0959 Fragaria x ananassa HOM05D012654 ORTHO05D015056 2.4e-10 69.7 73 46.6
Atru.chr1.2072 Acer truncatum HOM05D000030 ORTHO05D000009 3.1e-10 69.3 71 42.3
Atru.chr4.1208 Acer truncatum HOM05D000030 ORTHO05D000009 6.9e-10 68.2 71 43.7
Atru.chr7.12 Acer truncatum HOM05D000030 ORTHO05D000009 6.9e-10 68.2 71 43.7
Atru.chr5.1722 Acer truncatum HOM05D000030 ORTHO05D000009 9.1e-10 67.8 71 43.7
FvH4_4g22681 Fragaria vesca HOM05D000030 ORTHO05D000031 1.2e-09 67.4 111 36.9
Atru.chr3.4252 Acer truncatum HOM05D000030 ORTHO05D000031 1.5e-09 67.0 71 43.7
Atru.chr11.1061 Acer truncatum HOM05D000044 ORTHO05D000009 2.0e-09 66.6 71 42.3
Atru.chr7.1300 Acer truncatum HOM05D000030 ORTHO05D000009 2.6e-09 66.2 71 42.3
Atru.ctg1438.3 Acer truncatum HOM05D000030 ORTHO05D000009 2.6e-09 66.2 71 42.3
Atru.chr4.1709 Acer truncatum HOM05D000030 ORTHO05D000009 7.7e-09 64.7 71 42.3
TWI34G1469 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 7.7e-09 64.7 97 29.9
TWI15G0053 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.3e-08 63.9 97 29.9
Atru.chr7.19 Acer truncatum HOM05D000030 ORTHO05D000031 1.7e-08 63.5 71 40.8
Oeu017856.1 Olea europaea HOM05D000030 ORTHO05D000031 8.5e-08 61.2 66 40.9
QL10p008784 Quercus lobata HOM05D000030 ORTHO05D000009 1.1e-07 60.8 60 38.3
FAN14G3956 Fragaria x ananassa HOM05D011243 ORTHO05D013838 1.9e-07 60.1 41 65.9
Oeu056459.1 Olea europaea HOM05D000030 ORTHO05D000031 1.9e-07 60.1 66 40.9
SHI42862 Sapria himalayana HOM05D000035 ORTHO05D000009 1.9e-07 60.1 69 34.8
Atru.chr9.107 Acer truncatum HOM05D000030 ORTHO05D000031 2.5e-07 59.7 65 36.9
Oeu002123.1 Olea europaea HOM05D000030 ORTHO05D000009 2.5e-07 59.7 124 27.4
TWI60G1493 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.5e-07 59.7 106 28.3
FvH4_3g35982 Fragaria vesca HOM05D011243 ORTHO05D198644 4.2e-07 58.9 41 68.3
Oeu040213.1 Olea europaea HOM05D000030 ORTHO05D000009 4.2e-07 58.9 61 39.3
SHI44194 Sapria himalayana HOM05D000035 ORTHO05D000031 4.2e-07 58.9 72 34.7
SHI50059 Sapria himalayana HOM05D000035 ORTHO05D000031 4.2e-07 58.9 65 36.9
Atru.chr1.3466 Acer truncatum HOM05D000030 ORTHO05D000009 5.5e-07 58.5 66 36.4
SHI41025 Sapria himalayana HOM05D000035 ORTHO05D000031 7.2e-07 58.2 65 35.4
CSS0000551 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 9.4e-07 57.8 55 43.6
SHI47889 Sapria himalayana HOM05D000035 ORTHO05D000031 9.4e-07 57.8 66 36.4
SHI48561 Sapria himalayana HOM05D000035 ORTHO05D000031 9.4e-07 57.8 62 37.1
Atru.chr13.1603 Acer truncatum HOM05D000030 ORTHO05D000009 1.2e-06 57.4 66 39.4
Atru.chr7.92 Acer truncatum HOM05D000030 ORTHO05D000009 1.2e-06 57.4 65 35.4
SHI45929 Sapria himalayana HOM05D000035 ORTHO05D000031 1.2e-06 57.4 66 36.4
TPR.G35969 Trifolium pratense HOM05D000030 ORTHO05D000009 1.2e-06 57.4 73 35.6
FvH4_2g03380 Fragaria vesca HOM05D000030 ORTHO05D000009 1.6e-06 57.0 66 39.4
SHI45145 Sapria himalayana HOM05D000035 ORTHO05D000009 2.1e-06 56.6 69 33.3
SHI45500 Sapria himalayana HOM05D000035 ORTHO05D000009 2.1e-06 56.6 68 38.2
SHI45936 Sapria himalayana HOM05D000035 ORTHO05D000031 2.1e-06 56.6 66 34.8
SHI46076 Sapria himalayana HOM05D000035 ORTHO05D000031 2.1e-06 56.6 69 33.3
SHI49031 Sapria himalayana HOM05D000035 ORTHO05D000009 2.1e-06 56.6 68 33.8
SHI49382 Sapria himalayana HOM05D000035 ORTHO05D000009 2.1e-06 56.6 57 43.9
SHI46835 Sapria himalayana HOM05D000035 ORTHO05D000031 2.7e-06 56.2 69 34.8
SHI50621 Sapria himalayana HOM05D000035 ORTHO05D000009 2.7e-06 56.2 59 39.0
Atru.chr6.1301 Acer truncatum HOM05D000030 ORTHO05D000009 3.6e-06 55.8 66 39.4
Hma1.2p1_0935F.1_g238560 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.6e-06 55.8 62 38.7
Hma1.2p1_1202F.1_g266820 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.6e-06 55.8 62 38.7
Lj3g0013834 Lotus japonicus HOM05D000030 ORTHO05D000009 3.6e-06 55.8 67 34.3
SHI32743 Sapria himalayana HOM05D000035 ORTHO05D000009 3.6e-06 55.8 74 35.1
SHI40087 Sapria himalayana HOM05D000035 ORTHO05D000031 3.6e-06 55.8 72 34.7
SHI46903 Sapria himalayana HOM05D000035 ORTHO05D000009 3.6e-06 55.8 69 33.3
CSS0020418 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.7e-06 55.5 57 40.4
Hma1.2p1_0081F.1_g042310 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.7e-06 55.5 62 38.7
Hma1.2p1_0123F.1_g057940 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.7e-06 55.5 73 32.9
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.7e-06 55.5 66 39.4
SHI40347 Sapria himalayana HOM05D000035 ORTHO05D000031 4.7e-06 55.5 57 38.6
SHI41219 Sapria himalayana HOM05D000035 ORTHO05D000031 4.7e-06 55.5 66 33.3
SHI46938 Sapria himalayana HOM05D000035 ORTHO05D000031 4.7e-06 55.5 66 33.3
SHI50466 Sapria himalayana HOM05D000035 ORTHO05D000031 4.7e-06 55.5 69 33.3
SHI51841 Sapria himalayana HOM05D000035 ORTHO05D000009 4.7e-06 55.5 66 33.3
Atru.chr9.686 Acer truncatum HOM05D000030 ORTHO05D000031 6.1e-06 55.1 62 37.1
SHI41264 Sapria himalayana HOM05D000035 ORTHO05D000009 6.1e-06 55.1 69 33.3
SHI41442 Sapria himalayana HOM05D000035 ORTHO05D000009 6.1e-06 55.1 65 35.4
SHI45884 Sapria himalayana HOM05D000035 ORTHO05D000009 6.1e-06 55.1 68 36.8
SHI46509 Sapria himalayana HOM05D000035 ORTHO05D000009 6.1e-06 55.1 66 34.8
SHI47295 Sapria himalayana HOM05D000035 ORTHO05D000009 6.1e-06 55.1 69 33.3
SHI49410 Sapria himalayana HOM05D000035 ORTHO05D000031 6.1e-06 55.1 65 33.8
SHI50175 Sapria himalayana HOM05D000035 ORTHO05D000031 6.1e-06 55.1 69 33.3
CSS0013055 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.9e-06 54.7 66 39.4
CSS0023181 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.9e-06 54.7 66 37.9
QL11p046631 Quercus lobata HOM05D000030 ORTHO05D000009 7.9e-06 54.7 60 33.3
SHI35349 Sapria himalayana HOM05D000030 ORTHO05D000009 7.9e-06 54.7 57 43.9
SHI40061 Sapria himalayana HOM05D000035 ORTHO05D000031 7.9e-06 54.7 62 38.7
SHI41489 Sapria himalayana HOM05D000035 ORTHO05D000031 7.9e-06 54.7 69 31.9
SHI43589 Sapria himalayana HOM05D000035 ORTHO05D000031 7.9e-06 54.7 69 33.3
SHI44096 Sapria himalayana HOM05D000035 ORTHO05D000009 7.9e-06 54.7 69 31.9
SHI45334 Sapria himalayana HOM05D000035 ORTHO05D000031 7.9e-06 54.7 65 33.8
SHI45515 Sapria himalayana HOM05D000035 ORTHO05D000031 7.9e-06 54.7 69 33.3
SHI50219 Sapria himalayana HOM05D000035 ORTHO05D000031 7.9e-06 54.7 69 33.3
SHI50510 Sapria himalayana HOM05D000035 ORTHO05D000031 7.9e-06 54.7 69 33.3


User provided reference genes

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