Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 4.1e-198 694.5 344 100.0
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 2.2e-175 619.0 362 87.8
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 3.9e-172 608.2 394 81.2
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 2.5e-163 578.9 355 84.8
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 4.9e-151 538.1 304 87.2
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 2.6e-128 462.6 289 76.1
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 7.9e-125 451.1 304 72.4
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 1.1e-102 377.5 369 55.0
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 7.2e-102 374.8 303 63.7
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 1.4e-100 370.5 325 58.5
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 1.8e-100 370.2 324 57.7
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 2.2e-98 363.2 324 58.3
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 1.1e-97 360.9 324 58.6
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 1.4e-97 360.5 326 56.1
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 3.1e-97 359.4 314 60.5
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 1.6e-93 347.1 328 54.3
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 3.6e-93 345.9 309 57.0
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 3.6e-93 345.9 327 56.6
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 5.2e-92 342.0 296 60.1
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 6.7e-92 341.7 299 56.9
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 1.5e-91 340.5 306 56.2
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 5.7e-91 338.6 311 56.6
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 9.7e-91 337.8 310 56.1
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 1.7e-90 337.0 299 56.5
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 2.2e-87 326.6 311 56.6
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 2.9e-87 326.2 327 53.2
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 5.0e-87 325.5 318 52.5
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 1.1e-86 324.3 302 56.0
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 1.5e-86 323.9 315 52.1
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 3.2e-86 322.8 327 52.6
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 4.2e-86 322.4 334 53.3
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 7.2e-86 321.6 307 54.4
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 7.2e-86 321.6 302 56.0
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 1.2e-85 320.9 300 54.3
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 2.1e-85 320.1 308 53.6
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 6.1e-85 318.5 339 52.5
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 1.0e-84 317.8 322 53.1
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 1.4e-84 317.4 328 52.4
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 1.4e-84 317.4 303 54.8
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 1.8e-84 317.0 282 56.7
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 2.3e-84 316.6 354 49.7
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 2.3e-84 316.6 338 52.7
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 5.2e-84 315.5 336 52.7
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 8.8e-84 314.7 318 53.5
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 1.5e-83 313.9 329 50.2
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 3.4e-83 312.8 313 55.6
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 5.7e-83 312.0 336 50.3
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 7.5e-83 311.6 325 53.2
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 7.5e-83 311.6 351 51.3
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 1.7e-82 310.5 329 52.0
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 1.7e-82 310.5 314 52.9
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 2.2e-82 310.1 312 52.9
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 4.8e-82 308.9 330 52.1
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 1.3e-79 300.8 324 49.4
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 1.3e-79 300.8 332 50.0
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 3.8e-79 299.3 323 50.2
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 1.1e-78 297.7 310 49.4
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 5.5e-78 295.4 331 48.9
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 7.2e-78 295.0 328 51.2
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 2.1e-77 293.5 313 50.8
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 3.6e-77 292.7 334 50.0
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 1.5e-75 287.3 280 54.3
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 2.8e-74 283.1 252 60.7
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 9.2e-73 278.1 318 48.7
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 2.7e-72 276.6 310 47.4
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 8.6e-71 271.6 266 54.1
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 2.8e-69 266.5 205 65.4
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 1.0e-68 264.6 275 51.3
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 5.7e-67 258.8 319 45.8
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 5.7e-67 258.8 348 41.7
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 2.9e-66 256.5 216 59.7
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 3.2e-65 253.1 313 46.6
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 1.6e-64 250.8 249 54.2
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 3.5e-64 249.6 391 39.4
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 6.2e-61 238.8 216 55.6
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 5.8e-59 232.3 309 44.3
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 5.4e-57 225.7 326 42.6
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 1.9e-54 217.2 304 41.1
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 3.4e-51 206.5 313 39.6
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 4.1e-49 199.5 330 38.5
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 4.0e-44 183.0 299 37.1
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 5.4e-41 172.6 186 48.4
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 2.1e-40 170.6 301 35.9
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 3.5e-40 169.9 106 73.6
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 2.3e-39 167.2 110 72.7
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 2.4e-36 157.1 104 69.2
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 8.9e-36 155.2 109 67.9
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 3.4e-35 153.3 118 62.7
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 1.7e-34 151.0 96 72.9
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 7.1e-33 145.6 125 60.0
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 3.9e-31 139.8 326 33.7
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.4e-28 131.3 148 48.6
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 1.4e-20 104.8 149 38.9
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 5.6e-14 82.8 369 23.0
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 6.2e-13 79.3 59 66.1
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 9.3e-09 65.5 61 57.4


User provided reference genes

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