Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.8e-241 838.2 420 100.0
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.4e-208 729.6 396 93.7
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 3.0e-203 711.8 396 92.2
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 2.7e-196 688.7 394 89.6
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 3.3e-173 612.1 373 86.1
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 2.1e-172 609.4 393 78.6
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 3.2e-168 595.5 392 79.1
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 5.0e-166 588.2 379 83.1
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 2.0e-154 549.7 397 73.3
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 2.2e-153 546.2 397 73.0
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 3.8e-153 545.4 379 75.2
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 1.9e-152 543.1 395 71.4
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 1.3e-150 537.0 381 72.7
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 1.7e-150 536.6 379 75.5
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 2.5e-149 532.7 378 74.3
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 2.8e-148 529.3 379 73.1
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 3.6e-148 528.9 397 71.5
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 8.1e-148 527.7 380 73.9
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 9.0e-147 524.2 379 72.3
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.2e-146 523.9 381 72.2
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 1.2e-146 523.9 375 73.6
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 1.5e-146 523.5 379 71.8
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 1.3e-145 520.4 389 69.9
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 2.9e-145 519.2 379 72.0
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 6.4e-145 518.1 390 69.5
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 1.1e-144 517.3 376 71.0
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 1.4e-144 516.9 386 70.5
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 4.2e-144 515.4 386 70.5
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 7.1e-144 514.6 386 71.2
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 9.3e-144 514.2 301 88.0
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 3.5e-143 512.3 394 69.0
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 7.8e-143 511.1 382 69.9
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 1.0e-142 510.8 386 69.7
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 3.0e-142 509.2 394 68.8
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 3.9e-142 508.8 378 69.3
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 6.6e-142 508.1 379 67.5
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 1.9e-141 506.5 402 67.4
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 7.3e-141 504.6 430 65.1
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 1.6e-140 503.4 376 69.7
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 2.1e-140 503.1 381 68.0
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 2.8e-140 502.7 371 72.0
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 1.1e-139 500.7 380 69.5
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 3.1e-139 499.2 382 67.3
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 9.0e-139 497.7 397 68.3
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 1.2e-138 497.3 380 68.2
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.5e-138 496.9 398 68.1
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 2.6e-138 496.1 411 65.5
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 3.4e-138 495.7 378 68.0
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 4.5e-138 495.4 397 68.0
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 7.6e-138 494.6 377 68.2
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 9.9e-138 494.2 377 69.5
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 2.9e-137 492.7 336 75.6
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 2.9e-137 492.7 388 67.0
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 9.3e-136 487.6 335 74.0
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 9.3e-136 487.6 373 68.4
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 1.2e-135 487.3 345 71.6
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 6.0e-135 485.0 433 59.1
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 1.0e-134 484.2 345 71.9
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 1.0e-134 484.2 345 71.6
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 2.3e-134 483.0 383 66.6
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 8.7e-134 481.1 373 67.0
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 5.6e-133 478.4 345 71.9
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 5.6e-133 478.4 336 71.4
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 7.4e-133 478.0 389 65.8
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 1.3e-132 477.2 401 64.6
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 2.8e-132 476.1 378 67.2
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 3.7e-132 475.7 378 67.2
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 4.8e-132 475.3 387 65.9
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 8.1e-132 474.6 390 65.4
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 8.1e-132 474.6 388 65.5
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 8.1e-132 474.6 375 68.0
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 8.1e-132 474.6 391 62.4
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 4.0e-131 472.2 395 64.6
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 1.2e-130 470.7 378 66.7
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 2.0e-130 469.9 378 66.1
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 2.6e-130 469.5 356 67.7
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 3.4e-130 469.2 337 69.1
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 9.9e-130 467.6 379 65.2
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 9.9e-130 467.6 380 65.0
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 4.9e-129 465.3 379 65.4
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 6.4e-129 464.9 391 63.2
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 6.4e-129 464.9 282 84.8
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 9.3e-128 461.1 387 63.8
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 9.3e-128 461.1 339 70.5
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 1.2e-127 460.7 377 63.7
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 2.7e-127 459.5 372 64.2
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 3.5e-127 459.1 371 65.5
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 1.8e-126 456.8 339 68.7
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 1.8e-126 456.8 376 63.0
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 1.1e-125 454.1 339 69.6
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 1.1e-125 454.1 339 69.6
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 3.3e-125 452.6 311 73.6
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 9.6e-125 451.1 309 74.1
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 2.1e-124 449.9 338 68.3
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 3.7e-124 449.1 379 63.9
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 4.8e-124 448.7 341 69.2
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 1.1e-123 447.6 334 70.1
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 9.0e-123 444.5 339 66.1
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 2.2e-121 439.9 331 69.5
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 8.4e-121 438.0 372 65.9
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 8.4e-121 438.0 347 65.4
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 2.5e-117 426.4 264 80.7
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 1.8e-115 420.2 318 68.9
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 1.3e-113 414.1 284 73.9
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 1.6e-111 407.1 278 77.3
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 1.3e-100 370.9 402 55.7
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 1.5e-98 364.0 337 57.3
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 2.6e-98 363.2 246 75.6
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 5.0e-97 359.0 321 58.3
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 4.2e-96 355.9 301 61.8
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 2.7e-95 353.2 278 66.2
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 2.3e-94 350.1 387 52.2
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 1.5e-93 347.4 370 54.3
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 9.7e-93 344.7 348 51.7
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 9.1e-91 338.2 323 57.9
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 2.2e-89 333.6 385 51.7
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 2.7e-87 326.6 196 82.1
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 2.1e-79 300.4 304 53.3
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 6.1e-79 298.9 394 47.5
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 1.8e-78 297.4 351 48.4
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.6e-77 293.5 201 76.1
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 3.7e-76 289.7 176 80.7
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 8.9e-70 268.5 208 65.9
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 5.9e-66 255.8 207 63.8
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 2.3e-65 253.8 196 68.9
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 4.3e-64 249.6 357 38.4
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 4.4e-61 239.6 165 73.3
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 5.8e-61 239.2 215 61.4
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 4.9e-60 236.1 170 72.4
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 9.2e-59 231.9 364 39.3
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.0e-57 228.4 219 57.5
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 3.0e-49 200.3 374 36.4
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 3.9e-49 199.9 164 64.0
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.5e-48 198.0 124 73.4
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.3e-48 196.8 172 58.1
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 4.7e-47 193.0 120 75.0
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 4.0e-46 189.9 251 41.8
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 5.4e-43 179.5 301 34.6
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.8e-39 167.2 370 32.4
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 8.9e-38 162.2 130 63.1
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 3.8e-36 156.8 164 55.5
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 3.2e-35 153.7 122 64.8
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 9.6e-32 142.1 338 34.6
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 3.0e-25 120.6 114 58.8
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 5.6e-24 116.3 70 77.1
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 4.5e-21 106.7 106 56.6
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 2.1e-18 97.8 72 63.9
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 6.0e-18 96.3 96 55.2
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 6.2e-15 86.3 45 93.3


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