Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0113 Fragaria x ananassa HOM05D008187 ORTHO05D009830 9.2e-80 300.1 141 100.0
FAN17G0865 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.8e-75 285.8 133 100.0
FAN07G0781 Fragaria x ananassa HOM05D008187 ORTHO05D009830 4.0e-75 284.6 133 99.2
FvH4_4g26140 Fragaria vesca HOM05D008187 ORTHO05D009830 8.9e-75 283.5 133 99.2
FAN12G2367 Fragaria x ananassa HOM05D008187 ORTHO05D009830 8.9e-75 283.5 133 99.2
FAN12G2898 Fragaria x ananassa HOM05D008187 ORTHO05D009830 8.9e-75 283.5 133 99.2
FAN22G0157 Fragaria x ananassa HOM05D008187 ORTHO05D009830 2.6e-74 282.0 133 99.2
MD13G1015500 Malus domestica HOM05D008187 ORTHO05D009830 7.7e-26 120.9 145 55.2
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 7.9e-23 110.9 136 48.5
QL03p039185 Quercus lobata HOM05D008187 ORTHO05D009830 1.4e-22 110.2 146 46.6
MD16G1013000 Malus domestica HOM05D008187 ORTHO05D009830 7.4e-21 104.4 105 60.0
GSVIVG01011592001 Vitis vinifera HOM05D008187 ORTHO05D009830 9.7e-21 104.0 145 48.3
Dinv08898 Davidia involucrata HOM05D008187 ORTHO05D009830 2.8e-20 102.4 130 50.0
Glyma.05G137300 Glycine max HOM05D008187 ORTHO05D009830 2.8e-20 102.4 135 44.4
Lalb_Chr07g0187941 Lupinus albus HOM05D008187 ORTHO05D009830 6.3e-20 101.3 135 43.0
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 2.4e-19 99.4 123 48.8
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 3.1e-19 99.0 129 47.3
Glyma.08G092600 Glycine max HOM05D008187 ORTHO05D009830 1.2e-18 97.1 140 42.9
CiPaw.06G058400 Carya illinoinensis HOM05D008187 ORTHO05D009830 1.0e-17 94.0 123 44.7
Ca_18193_v3 Cicer arietinum L. HOM05D008187 ORTHO05D009830 1.0e-17 94.0 136 43.4
Lj4g0022895 Lotus japonicus HOM05D008187 ORTHO05D009830 2.2e-17 92.8 139 41.7
Potri.010G101500 Populus trichocarpa HOM05D008187 ORTHO05D009830 2.2e-17 92.8 132 42.4
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 3.8e-17 92.0 134 43.3
CSS0005647 Camellia sinensis var. sinensis HOM05D008187 ORTHO05D009830 6.5e-17 91.3 138 43.5
Dinv20504 Davidia involucrata HOM05D008187 ORTHO05D009830 8.5e-17 90.9 108 50.0
Dinv20537 Davidia involucrata HOM05D008187 ORTHO05D009830 8.5e-17 90.9 108 50.0
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 1.1e-16 90.5 133 48.1
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 1.4e-16 90.1 132 41.7
Prupe.1G338300 Prunus persica HOM05D008187 ORTHO05D009830 1.4e-16 90.1 145 42.1
Hma1.2p1_0441F.1_g153840 Hydrangea macrophylla HOM05D008187 ORTHO05D009830 3.2e-16 89.0 121 46.3
Sabra10G0074300 Salix brachista HOM05D008187 ORTHO05D009830 1.2e-15 87.0 136 41.2
Potri.008G140000 Populus trichocarpa HOM05D008187 ORTHO05D009830 3.6e-15 85.5 136 38.2
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 1.8e-14 83.2 125 41.6
Actinidia38421 Actinidia chinensis HOM05D008187 ORTHO05D009830 2.3e-14 82.8 92 47.8
arahy.Tifrunner.gnm1.ann1.FUMC5T Arachis hypogaea HOM05D008187 ORTHO05D009830 6.7e-14 81.3 123 40.7
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 8.8e-14 80.9 135 43.0
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 1.5e-13 80.1 88 50.0
COL.COLO4_27577 Corchorus olitorius HOM05D008187 ORTHO05D009830 2.6e-13 79.3 129 44.2
Sabra08G0106100 Salix brachista HOM05D008187 ORTHO05D009830 3.3e-13 79.0 137 38.7
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 4.4e-13 78.6 134 40.3
Rhsim09G0085300 Rhododendron simsii HOM05D008187 ORTHO05D009830 7.4e-13 77.8 138 39.9
arahy.Tifrunner.gnm1.ann1.61TZTK Arachis hypogaea HOM05D008187 ORTHO05D009830 4.8e-12 75.1 86 50.0
Gohir.D04G188100 Gossypium hirsutum HOM05D008187 ORTHO05D009830 1.1e-11 73.9 114 42.1
Gorai.012G183500 Gossypium raimondii HOM05D008187 ORTHO05D009830 1.1e-11 73.9 114 42.1
Actinidia34059 Actinidia chinensis HOM05D008187 ORTHO05D009830 4.1e-11 72.0 57 57.9
TWI77G0539 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 4.1e-11 72.0 124 41.1
Eucgr.B02651 Eucalyptus grandis HOM05D008187 ORTHO05D009830 5.3e-11 71.6 138 37.7
Haze_10806 Corylus avellana HOM05D008187 ORTHO05D009830 2.0e-10 69.7 76 48.7
Gohir.A04G143800 Gossypium hirsutum HOM05D008187 ORTHO05D009830 4.5e-10 68.6 109 41.3
MBI19_g01917_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D009830 5.9e-10 68.2 96 46.9
TPR.G11831 Trifolium pratense HOM05D008187 ORTHO05D009830 5.9e-10 68.2 100 42.0
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 1.0e-09 67.4 86 46.5
CsaV3_5G012950 Cucumis sativus L. HOM05D008187 ORTHO05D009830 1.3e-09 67.0 90 46.7
MELO3C020063.2 Cucumis melo HOM05D008187 ORTHO05D009830 1.7e-09 66.6 90 44.4
TPR.G34432 Trifolium pratense HOM05D008187 ORTHO05D009830 2.2e-09 66.2 77 44.2
ClCG11G000980 Citrullus lanatus HOM05D008187 ORTHO05D009830 2.9e-09 65.9 91 44.0
TWI74G1547 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 6.5e-09 64.7 88 45.5
Lj6A731T87 Lonicera japonica HOM05D008187 ORTHO05D009830 8.5e-09 64.3 87 46.0
CANSAT78G2356 Cannabis sativa HOM05D008187 ORTHO05D009830 1.1e-08 63.9 87 47.1
Lsat_1_v5_gn_4_24181 Lactuca sativa HOM05D008187 ORTHO05D009830 1.5e-08 63.5 86 43.0
HanXRQChr17g0566281 Helianthus annuus HOM05D008187 ORTHO05D009830 2.5e-08 62.8 92 38.0
TAR374G1419 Trochodendron aralioides HOM05D003603 ORTHO05D009830 2.5e-08 62.8 111 41.4
THA.LOC104805100 Tarenaya hassleriana HOM05D010619 ORTHO05D009830 7.2e-08 61.2 91 44.0
CDE03G0025 Ceratophyllum demersum HOM05D003603 ORTHO05D004186 1.6e-07 60.1 52 53.8
CDE06G0200 Ceratophyllum demersum HOM05D003603 ORTHO05D004186 1.6e-07 60.1 52 53.8
Sed0002824 Sechium edule HOM05D008187 ORTHO05D009830 1.6e-07 60.1 115 38.3
DCAR_026822 Daucus carota HOM05D008187 ORTHO05D009830 3.6e-07 58.9 102 35.3
Oeu062660.1 Olea europaea HOM05D008187 ORTHO05D009830 4.7e-07 58.5 67 46.3
CARHR144510 Cardamine hirsuta HOM05D010619 ORTHO05D009830 8.0e-07 57.8 99 36.4
DCAR_023540 Daucus carota HOM05D008187 ORTHO05D009830 8.0e-07 57.8 94 39.4
Thhalv10005091m.g Eutrema salsugineum HOM05D010619 ORTHO05D009830 1.4e-06 57.0 91 39.6
Ah.12g055980 Amaranthus hybridus HOM05D003603 ORTHO05D004186 4.0e-06 55.5 125 33.6
ATR0829G136 Amborella trichopoda HOM05D003603 ORTHO05D004186 5.2e-06 55.1 53 49.1
Nn3g18471 Nelumbo nucifera HOM05D008187 ORTHO05D009830 6.7e-06 54.7 181 31.5
SalBow1G3570 Salvia bowleyana HOM05D003603 ORTHO05D004186 6.7e-06 54.7 92 32.6
SalBow1G4269 Salvia bowleyana HOM05D003603 ORTHO05D004186 6.7e-06 54.7 92 32.6
Oeu017100.1 Olea europaea HOM05D003603 ORTHO05D004186 8.8e-06 54.3 68 42.6


User provided reference genes

Program Settings