Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 4.4e-147 524.6 272 100.0
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 2.8e-141 505.4 272 96.7
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.1e-140 503.4 272 96.3
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 1.1e-121 440.3 267 85.0
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 7.9e-120 434.1 255 90.6
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 9.8e-78 294.3 249 66.3
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 7.0e-76 288.1 244 67.6
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 1.6e-75 287.0 247 65.2
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 1.7e-74 283.5 240 64.6
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 3.8e-74 282.3 233 65.7
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 9.4e-73 277.7 238 62.6
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 2.3e-71 273.1 222 65.8
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 4.4e-70 268.9 239 61.5
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 1.3e-69 267.3 233 62.2
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 2.8e-69 266.2 232 62.1
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.0e-66 257.7 234 60.3
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 2.3e-66 256.5 241 59.8
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 3.8e-66 255.8 221 62.0
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 1.1e-65 254.2 233 58.4
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 1.5e-65 253.8 233 57.5
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 1.9e-65 253.4 228 61.0
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 6.1e-64 248.4 249 55.0
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 4.0e-63 245.7 237 59.1
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 8.9e-63 244.6 217 60.8
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 8.9e-63 244.6 235 57.0
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 2.0e-62 243.4 241 55.6
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.3e-61 240.7 233 55.8
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.2e-61 240.0 217 60.4
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 1.6e-59 233.8 240 56.2
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 2.7e-59 233.0 233 54.5
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 5.9e-59 231.9 255 53.3
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.7e-58 230.3 217 55.3
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 4.3e-57 225.7 234 56.0
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 4.3e-57 225.7 219 54.3
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 6.8e-55 218.4 232 50.9
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 8.9e-55 218.0 219 55.3
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 3.7e-53 212.6 190 60.0
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 8.3e-53 211.5 228 53.9
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 8.3e-53 211.5 188 60.1
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 1.4e-52 210.7 190 58.9
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 9.2e-52 208.0 219 52.1
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 9.2e-52 208.0 219 52.1
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 4.6e-51 205.7 219 52.5
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 5.0e-50 202.2 223 53.4
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 8.6e-50 201.4 221 50.7
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 8.6e-50 201.4 221 50.7
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 1.1e-49 201.1 222 50.0
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 3.3e-49 199.5 221 49.8
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 3.3e-49 199.5 217 49.3
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 4.3e-49 199.1 221 49.8
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 2.1e-48 196.8 153 66.0
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 2.8e-48 196.4 222 48.2
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.4e-47 194.1 221 49.3
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 1.8e-47 193.7 245 46.9
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 1.5e-46 190.7 226 47.8
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 3.4e-46 189.5 233 45.5
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 4.3e-41 172.6 167 56.3
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 2.3e-39 166.8 176 50.6
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 4.0e-39 166.0 168 56.5
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 2.0e-38 163.7 177 50.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 3.9e-34 149.4 199 39.7
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 4.0e-31 139.4 129 61.2
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 1.5e-30 137.5 165 48.5
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 1.1e-28 131.3 236 36.0
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 5.6e-25 119.0 233 34.3
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 1.3e-24 117.9 106 57.5
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.5e-22 110.9 133 49.6
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 5.8e-22 109.0 102 56.9
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 2.1e-19 100.5 189 33.9
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 8.7e-18 95.1 157 37.6
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.3e-16 91.3 203 31.5
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.3e-16 91.3 203 31.5
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 6.2e-16 89.0 175 32.0
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.2e-14 84.7 64 71.9
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 3.4e-14 83.2 68 63.2
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 3.4e-14 83.2 114 40.4
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 5.8e-14 82.4 120 40.8
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.1e-12 78.2 140 35.7
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.8e-08 63.5 52 65.4


User provided reference genes

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