Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.1e-74 283.1 139 100.0
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 2.3e-51 205.7 102 97.1
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 9.8e-50 200.3 102 94.1
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 4.4e-42 174.9 98 83.7
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.6e-39 164.9 151 64.2
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.3e-33 146.7 78 91.0
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.6e-31 139.8 114 60.5
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.9e-29 132.9 94 68.1
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 8.1e-28 127.5 100 62.0
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 1.4e-27 126.7 97 63.9
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 1.4e-27 126.7 96 65.6
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.4e-27 126.7 81 71.6
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 1.4e-27 126.7 96 64.6
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 3.1e-27 125.6 106 58.5
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 4.0e-27 125.2 85 69.4
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 5.2e-27 124.8 68 82.4
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 6.8e-27 124.4 90 64.4
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 6.8e-27 124.4 96 63.5
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 6.8e-27 124.4 99 62.6
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 1.5e-26 123.2 80 72.5
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.5e-26 123.2 90 68.9
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.0e-26 122.9 90 65.6
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 2.0e-26 122.9 103 63.1
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 2.0e-26 122.9 81 67.9
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 2.6e-26 122.5 83 68.7
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 3.4e-26 122.1 70 78.6
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 3.4e-26 122.1 84 69.0
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 4.4e-26 121.7 83 68.7
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 5.8e-26 121.3 65 81.5
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 7.6e-26 120.9 70 77.1
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 9.9e-26 120.6 95 62.1
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.3e-25 120.2 85 65.9
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.3e-25 120.2 93 59.1
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.7e-25 119.8 95 62.1
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 3.7e-25 118.6 86 62.8
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 3.7e-25 118.6 102 55.9
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 4.9e-25 118.2 97 62.9
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 4.9e-25 118.2 91 64.8
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 4.9e-25 118.2 64 81.2
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 4.9e-25 118.2 64 81.2
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 4.9e-25 118.2 64 81.2
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 6.4e-25 117.9 102 58.8
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 6.4e-25 117.9 96 61.5
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 8.4e-25 117.5 86 62.8
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 8.4e-25 117.5 78 71.8
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 1.1e-24 117.1 85 63.5
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.4e-24 116.7 70 74.3
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 1.4e-24 116.7 95 57.9
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.4e-24 116.7 66 80.3
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.4e-24 116.7 103 58.3
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 1.9e-24 116.3 96 59.4
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 2.4e-24 115.9 79 69.6
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 2.4e-24 115.9 83 65.1
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 3.2e-24 115.5 84 67.9
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 7.1e-24 114.4 61 82.0
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 7.1e-24 114.4 96 57.3
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 9.2e-24 114.0 89 59.6
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 1.6e-23 113.2 91 61.5
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 2.1e-23 112.8 86 62.8
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 2.1e-23 112.8 85 63.5
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 2.1e-23 112.8 97 54.6
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 2.7e-23 112.5 78 67.9
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 4.6e-23 111.7 64 75.0
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 4.6e-23 111.7 86 64.0
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 7.8e-23 110.9 87 63.2
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.3e-22 110.2 73 69.9
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 1.7e-22 109.8 94 57.4
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.3e-22 109.4 88 60.2
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 3.0e-22 109.0 96 56.2
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 3.9e-22 108.6 119 49.6
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 5.1e-22 108.2 59 79.7
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 5.1e-22 108.2 59 79.7
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 5.1e-22 108.2 59 79.7
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 8.6e-22 107.5 85 61.2
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-21 107.1 77 66.2
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.1e-21 107.1 77 66.2
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 1.9e-21 106.3 85 61.2
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 2.5e-21 105.9 82 63.4
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.5e-21 105.9 85 61.2
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 2.5e-21 105.9 95 54.7
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 2.5e-21 105.9 112 48.2
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 3.3e-21 105.5 75 64.0
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 3.3e-21 105.5 85 60.0
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 3.3e-21 105.5 77 64.9
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 3.3e-21 105.5 66 71.2
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 4.3e-21 105.1 65 67.7
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 5.6e-21 104.8 72 65.3
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 7.3e-21 104.4 71 67.6
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 9.6e-21 104.0 77 62.3
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.6e-20 103.2 73 63.0
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.6e-20 103.2 83 59.0
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.8e-20 102.4 86 57.0
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 3.6e-20 102.1 76 63.2
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 3.6e-20 102.1 72 63.9
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 1.8e-19 99.8 74 62.2
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 6.8e-19 97.8 58 70.7
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 1.2e-18 97.1 87 56.3
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 3.4e-18 95.5 51 80.4
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 5.8e-18 94.7 54 77.8
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 7.1e-16 87.8 55 67.3
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.3e-14 83.6 70 50.0
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 8.7e-14 80.9 65 61.5
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 3.6e-12 75.5 77 50.6
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 1.3e-06 57.0 61 45.9


User provided reference genes

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