Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3589 Fragaria x ananassa HOM05D005393 ORTHO05D006257 1.7e-51 205.7 100 100.0
FAN11G0106 Fragaria x ananassa HOM05D005393 ORTHO05D006257 1.2e-44 183.0 88 100.0
FAN16G0769 Fragaria x ananassa HOM05D005393 ORTHO05D006257 3.6e-22 108.2 53 100.0
FAN16G1012 Fragaria x ananassa HOM05D005393 ORTHO05D006257 4.2e-18 94.7 99 53.5
FvH4_3g40530 Fragaria vesca HOM05D005393 ORTHO05D006257 7.1e-18 94.0 99 53.5
FAN11G2844 Fragaria x ananassa HOM05D005393 ORTHO05D006257 7.1e-18 94.0 99 53.5
FAN21G0637 Fragaria x ananassa HOM05D005393 ORTHO05D006257 2.3e-16 89.0 94 51.1
RcHm_v2.0_Chr5g0073211 Rosa chinensis HOM05D005393 ORTHO05D006257 1.3e-14 83.2 103 47.6
MD08G1009600 Malus domestica HOM05D005393 ORTHO05D006257 1.2e-12 76.6 98 45.9
Actinidia15447 Actinidia chinensis HOM05D005393 ORTHO05D006257 1.6e-09 66.2 97 40.2
FAN15G1059 Fragaria x ananassa HOM05D005393 ORTHO05D006257 3.5e-09 65.1 99 42.4
FvH4_2g38110 Fragaria vesca HOM05D005393 ORTHO05D006257 1.0e-08 63.5 99 40.4
MSTRG.1171 Avicennia marina HOM05D005393 ORTHO05D006257 1.3e-08 63.2 97 37.1
RcHm_v2.0_Chr6g0303441 Rosa chinensis HOM05D005393 ORTHO05D006257 1.3e-08 63.2 99 42.4
Dinv39544 Davidia involucrata HOM05D005393 ORTHO05D006257 2.3e-08 62.4 97 39.2
Migut.C00880 Erythranthe guttata HOM05D005393 ORTHO05D006257 2.3e-08 62.4 97 38.1
Lj4A800T35 Lonicera japonica HOM05D005393 ORTHO05D006257 3.0e-08 62.0 98 38.8
Medtr3g114130 Medicago truncatula HOM05D005393 ORTHO05D006257 3.0e-08 62.0 97 40.2
vmacro07566 Vaccinium macrocarpon HOM05D005393 ORTHO05D006257 3.0e-08 62.0 97 38.1
DCAR_013885 Daucus carota HOM05D005393 ORTHO05D006257 5.1e-08 61.2 97 39.2
Rhsim06G0018100 Rhododendron simsii HOM05D005393 ORTHO05D006257 5.1e-08 61.2 97 38.1
Haze_04666 Corylus avellana HOM05D005393 ORTHO05D006257 6.7e-08 60.8 100 40.0
Sp1g09970 Schrenkiella parvula HOM05D005393 ORTHO05D006257 1.1e-07 60.1 101 38.6
Cc10_g01360 Coffea canephora HOM05D005393 ORTHO05D006257 1.5e-07 59.7 94 35.1
Thhalv10007713m.g Eutrema salsugineum HOM05D005393 ORTHO05D006257 1.5e-07 59.7 100 40.0
Cfa006180 Carpinus fangiana HOM05D005393 ORTHO05D006257 1.9e-07 59.3 100 39.0
Eucgr.H00932 Eucalyptus grandis HOM05D005393 ORTHO05D006257 1.9e-07 59.3 97 39.2
FAN27G3400 Fragaria x ananassa HOM05D005393 ORTHO05D006257 2.5e-07 58.9 99 40.4
Psat0s1401g0120 Pisum sativum HOM05D005393 ORTHO05D006257 3.3e-07 58.5 98 37.8
CSS0039974 Camellia sinensis var. sinensis HOM05D005393 ORTHO05D006257 4.3e-07 58.2 97 37.1
SalBow7G1577 Salvia bowleyana HOM05D005393 ORTHO05D006257 4.3e-07 58.2 97 37.1
Carub.0001s1094 Capsella rubella HOM05D005393 ORTHO05D006257 5.7e-07 57.8 97 37.1
MELO3C011344.2 Cucumis melo HOM05D005393 ORTHO05D006257 5.7e-07 57.8 94 38.3
Potri.005G242900 Populus trichocarpa HOM05D005393 ORTHO05D006257 7.4e-07 57.4 97 36.1
Aa31LG1G3380 Aethionema arabicum HOM05D005393 ORTHO05D006257 9.6e-07 57.0 94 37.2
BcaC05g24995 Brassica carinata HOM05D005393 ORTHO05D006257 9.6e-07 57.0 99 38.4
CsaV3_2G024390 Cucumis sativus L. HOM05D005393 ORTHO05D006257 9.6e-07 57.0 94 38.3
Oeu051167.1 Olea europaea HOM05D005393 ORTHO05D006257 9.6e-07 57.0 97 37.1
QL02p012400 Quercus lobata HOM05D005393 ORTHO05D006257 9.6e-07 57.0 90 38.9
Solyc04g015400.3 Solanum lycopersicum HOM05D005393 ORTHO05D006257 9.6e-07 57.0 96 34.4
Sopen04g007470 Solanum pennellii HOM05D005393 ORTHO05D006257 9.6e-07 57.0 96 34.4
TWI36G1703 Tripterygium wilfordii HOM05D005393 ORTHO05D006257 9.6e-07 57.0 90 37.8
C05p09550 Brassica napus HOM05D005393 ORTHO05D006257 1.3e-06 56.6 99 38.4
BolC5t29697H Brassica oleracea HOM05D005393 ORTHO05D006257 1.3e-06 56.6 99 38.4
MBI05_g23374_MAGBIO Magnolia biondii HOM05D005393 ORTHO05D006257 1.3e-06 56.6 87 40.2
MBI05_g40808_MAGBIO Magnolia biondii HOM05D005393 ORTHO05D006257 1.3e-06 56.6 87 40.2
unitig_46.g18035 Utricularia gibba HOM05D005393 ORTHO05D006257 1.3e-06 56.6 97 35.1
SGA_v2.0_scaffold292G47368 Striga asiatica HOM05D005359 ORTHO05D006431 1.6e-06 56.2 92 39.1
CARHR011570 Cardamine hirsuta HOM05D005393 ORTHO05D006257 2.1e-06 55.8 98 37.8
Gohir.D05G026300 Gossypium hirsutum HOM05D005393 ORTHO05D006257 2.8e-06 55.5 44 54.5
Gorai.009G026400 Gossypium raimondii HOM05D005393 ORTHO05D006257 2.8e-06 55.5 44 54.5
Gorai.010G073400 Gossypium raimondii HOM05D005393 ORTHO05D006257 2.8e-06 55.5 44 54.5
Atru.chr13.247 Acer truncatum HOM05D005393 ORTHO05D006257 3.7e-06 55.1 90 37.8
A06p07940 Brassica napus HOM05D005393 ORTHO05D006257 3.7e-06 55.1 99 37.4
Lalb_Chr08g0246221 Lupinus albus HOM05D005393 ORTHO05D006257 3.7e-06 55.1 100 37.0
TPR.G38234 Trifolium pratense HOM05D005393 ORTHO05D006257 3.7e-06 55.1 44 54.5
CiPaw.07G145800 Carya illinoinensis HOM05D005393 ORTHO05D006257 4.8e-06 54.7 90 37.8
ECA233G5167 Erigeron canadensis HOM05D005393 ORTHO05D006257 4.8e-06 54.7 94 40.4
Gohir.A05G024800 Gossypium hirsutum HOM05D005393 ORTHO05D006257 4.8e-06 54.7 44 52.3
Nitab4.5_0000147g0020 Nicotiana tabacum HOM05D005393 ORTHO05D006257 4.8e-06 54.7 96 34.4
Peaxi162Scf01286g00014 Petunia axillaris HOM05D005393 ORTHO05D006257 4.8e-06 54.7 94 34.0
Thecc.09G106500 Theobroma cacao HOM05D005393 ORTHO05D006257 4.8e-06 54.7 97 33.0
ClCG08G014060 Citrullus lanatus HOM05D005393 ORTHO05D006257 6.2e-06 54.3 94 37.2
BraA06t23994Z Brassica rapa HOM05D005393 ORTHO05D006257 8.2e-06 53.9 99 36.4
Nitab4.5_0001663g0130 Nicotiana tabacum HOM05D005393 ORTHO05D006257 8.2e-06 53.9 96 34.4


User provided reference genes

Program Settings