Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.6e-74 282.7 147 100.0
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 5.1e-73 277.7 145 99.3
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 5.6e-72 274.2 145 97.9
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 9.7e-64 246.9 145 89.0
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 9.0e-62 240.4 145 88.3
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 1.1e-51 206.8 145 73.1
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 1.4e-49 199.9 110 93.6
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 2.2e-47 192.6 148 74.3
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 4.5e-37 158.3 105 76.2
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 6.5e-36 154.5 147 60.5
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 9.4e-35 150.6 128 63.3
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 3.6e-34 148.7 150 59.3
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 1.0e-33 147.1 120 65.8
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 1.8e-33 146.4 157 58.6
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.8e-33 146.4 86 82.6
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 2.3e-33 146.0 144 59.7
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 2.3e-33 146.0 150 59.3
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 3.0e-33 145.6 109 70.6
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 5.2e-33 144.8 140 61.4
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 5.2e-33 144.8 109 69.7
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 5.2e-33 144.8 146 57.5
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 6.7e-33 144.4 153 59.5
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 8.8e-33 144.1 152 57.9
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.5e-32 143.3 102 71.6
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 2.0e-32 142.9 150 57.3
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 2.6e-32 142.5 104 75.0
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.6e-32 142.5 150 58.7
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 3.3e-32 142.1 154 58.4
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 3.3e-32 142.1 155 55.5
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 9.7e-32 140.6 120 62.5
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 9.7e-32 140.6 108 70.4
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.3e-31 140.2 147 56.5
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 1.3e-31 140.2 87 79.3
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 1.3e-31 140.2 133 61.7
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.7e-31 139.8 163 57.1
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 2.8e-31 139.0 147 57.1
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 4.8e-31 138.3 146 58.2
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 6.3e-31 137.9 106 67.9
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 8.2e-31 137.5 116 68.1
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 8.2e-31 137.5 112 65.2
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.1e-30 137.1 149 55.7
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 1.1e-30 137.1 90 77.8
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 1.8e-30 136.3 160 52.5
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 3.1e-30 135.6 84 77.4
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 3.1e-30 135.6 141 57.4
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 3.1e-30 135.6 144 56.9
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 4.1e-30 135.2 150 56.0
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 5.3e-30 134.8 151 53.6
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 7.0e-30 134.4 110 68.2
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 7.0e-30 134.4 150 57.3
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 9.1e-30 134.0 73 87.7
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 9.1e-30 134.0 102 67.6
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 9.1e-30 134.0 72 87.5
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.6e-29 133.3 91 73.6
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 1.6e-29 133.3 82 80.5
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 2.0e-29 132.9 148 55.4
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 2.0e-29 132.9 72 88.9
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 2.0e-29 132.9 130 59.2
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 2.0e-29 132.9 95 75.8
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 2.7e-29 132.5 118 62.7
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 2.7e-29 132.5 72 88.9
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 3.5e-29 132.1 149 55.7
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 4.5e-29 131.7 73 87.7
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 5.9e-29 131.3 97 70.1
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 5.9e-29 131.3 147 53.7
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 7.7e-29 131.0 72 86.1
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 7.7e-29 131.0 70 90.0
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 7.7e-29 131.0 149 55.0
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 7.7e-29 131.0 109 66.1
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 7.7e-29 131.0 101 68.3
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 1.0e-28 130.6 98 71.4
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.0e-28 130.6 73 86.3
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 2.2e-28 129.4 98 65.3
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 2.2e-28 129.4 98 65.3
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 2.2e-28 129.4 79 77.2
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 2.9e-28 129.0 72 84.7
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 2.9e-28 129.0 79 78.5
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 3.8e-28 128.6 141 53.9
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 3.8e-28 128.6 73 82.2
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 6.5e-28 127.9 72 83.3
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 6.5e-28 127.9 72 83.3
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 6.5e-28 127.9 108 64.8
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 1.5e-27 126.7 90 70.0
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 2.5e-27 125.9 71 83.1
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 3.2e-27 125.6 73 80.8
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 5.5e-27 124.8 73 79.5
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 7.2e-27 124.4 83 74.7
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 7.2e-27 124.4 73 80.8
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 7.2e-27 124.4 79 75.9
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 9.4e-27 124.0 142 53.5
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 1.2e-26 123.6 124 55.6
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 1.2e-26 123.6 72 81.9
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 2.7e-26 122.5 149 49.7
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.6e-26 122.1 144 52.1
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 3.6e-26 122.1 86 70.9
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 4.7e-26 121.7 76 76.3
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 3.0e-25 119.0 144 52.1
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 5.2e-25 118.2 76 72.4
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 6.8e-25 117.9 86 61.6
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 4.4e-24 115.2 72 75.0
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.2e-23 112.8 126 51.6
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 6.3e-23 111.3 144 45.1
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 8.3e-23 110.9 77 67.5
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 1.8e-22 109.8 77 66.2
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 9.1e-22 107.5 148 45.9
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.6e-21 106.7 74 66.2
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 2.3e-20 102.8 119 52.1
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.6e-16 89.4 49 87.8
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.4e-16 88.6 66 68.2
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.4e-14 83.6 56 73.2
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 2.0e-13 79.7 56 64.3
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 8.6e-12 74.3 129 42.6
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 8.6e-12 74.3 129 42.6
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 3.3e-11 72.4 70 55.7
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 3.1e-09 65.9 152 35.5
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 3.4e-08 62.4 68 48.5
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 2.2e-07 59.7 76 48.7


User provided reference genes

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