Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3505 Fragaria x ananassa HOM05D006429 ORTHO05D008173 4.6e-103 377.9 188 100.0
FAN15G1390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 1.3e-76 290.0 161 91.3
FvH4_2g29360 Fragaria vesca HOM05D006429 ORTHO05D008173 3.7e-76 288.5 161 90.7
FAN24G2390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 8.2e-76 287.3 161 90.7
FAN27G0392 Fragaria x ananassa HOM05D006429 ORTHO05D008173 1.7e-73 279.6 161 88.8
RcHm_v2.0_Chr6g0298181 Rosa chinensis HOM05D006429 ORTHO05D008173 7.7e-66 254.2 164 79.9
Prupe.1G479100 Prunus persica HOM05D006429 ORTHO05D008173 3.3e-48 195.7 181 60.2
CANSAT01G2886 Cannabis sativa HOM05D006429 ORTHO05D008173 3.5e-42 175.6 181 57.5
GSVIVG01035836001 Vitis vinifera HOM05D006429 ORTHO05D008173 5.0e-41 171.8 181 53.0
Cfa013165 Carpinus fangiana HOM05D006429 ORTHO05D008173 1.1e-40 170.6 181 54.7
Nn8g39429 Nelumbo nucifera HOM05D006429 ORTHO05D008173 1.5e-40 170.2 171 55.6
TAR626G0443 Trochodendron aralioides HOM05D006429 ORTHO05D008173 4.3e-40 168.7 167 58.1
CSS0049939 Camellia sinensis var. sinensis HOM05D006429 ORTHO05D008173 2.8e-39 166.0 168 57.1
Phvul.001G051900 Phaseolus vulgaris HOM05D006429 ORTHO05D008173 1.4e-38 163.7 161 56.5
Manes.03G016200 Manihot esculenta HOM05D006429 ORTHO05D008173 1.8e-38 163.3 184 53.8
VMungo0647G0488 Vigna mungo HOM05D006429 ORTHO05D008173 2.3e-38 162.9 161 56.5
CiPaw.08G012100 Carya illinoinensis HOM05D006429 ORTHO05D008173 6.8e-38 161.4 181 52.5
Hma1.2p1_0007F.1_g004980 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 8.9e-38 161.0 180 51.1
Hma1.2p1_0007F.1_g004990 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 8.9e-38 161.0 180 51.1
Ca_12935_v3 Cicer arietinum L. HOM05D006429 ORTHO05D008173 2.6e-37 159.5 156 56.4
Dinv30158 Davidia involucrata HOM05D006429 ORTHO05D008173 3.4e-37 159.1 181 54.1
Ciclev10008199m.g Citrus clementina HOM05D006429 ORTHO05D008173 7.5e-37 157.9 168 55.4
MD08G1148100 Malus domestica HOM05D006429 ORTHO05D008173 9.9e-37 157.5 185 53.5
Cpa.g.sc115.3 Carica papaya HOM05D006429 ORTHO05D008173 3.7e-36 155.6 184 52.7
Glyma.17G209600 Glycine max HOM05D006429 ORTHO05D008173 1.9e-35 153.3 155 54.8
Medtr1g012370 Medicago truncatula HOM05D006429 ORTHO05D008173 2.4e-35 152.9 163 54.6
arahy.Tifrunner.gnm1.ann1.H48Z1Z Arachis hypogaea HOM05D006429 ORTHO05D008173 2.1e-34 149.8 138 58.0
Cc08_g00870 Coffea canephora HOM05D006429 ORTHO05D008173 2.1e-34 149.8 182 48.9
Psat6g029600 Pisum sativum HOM05D006429 ORTHO05D008173 2.1e-34 149.8 141 56.7
arahy.Tifrunner.gnm1.ann1.DMN84V Arachis hypogaea HOM05D006429 ORTHO05D008173 2.7e-34 149.4 161 50.3
Lj5g0005549 Lotus japonicus HOM05D006429 ORTHO05D008173 3.5e-34 149.1 141 55.3
COL.COLO4_18834 Corchorus olitorius HOM05D006429 ORTHO05D008173 4.6e-34 148.7 183 51.4
Thecc.09G027300 Theobroma cacao HOM05D006429 ORTHO05D008173 4.6e-34 148.7 166 54.2
TWI32G0327 Tripterygium wilfordii HOM05D006429 ORTHO05D008173 4.6e-34 148.7 167 54.5
Rhsim07G0157100 Rhododendron simsii HOM05D006429 ORTHO05D008173 1.3e-33 147.1 182 48.9
MELO3C003691.2 Cucumis melo HOM05D006429 ORTHO05D008173 1.7e-33 146.7 129 58.1
Gorai.001G033000 Gossypium raimondii HOM05D006429 ORTHO05D008173 1.7e-33 146.7 166 52.4
QL02p022136 Quercus lobata HOM05D006429 ORTHO05D008173 1.7e-33 146.7 158 53.8
Eucgr.C02791 Eucalyptus grandis HOM05D006429 ORTHO05D008173 2.3e-33 146.4 182 50.5
Eucgr.C02795 Eucalyptus grandis HOM05D006429 ORTHO05D008173 3.0e-33 146.0 131 58.8
Gohir.D07G031600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 3.0e-33 146.0 182 49.5
CsaV3_3G046490 Cucumis sativus L. HOM05D006429 ORTHO05D008173 3.9e-33 145.6 157 52.9
Actinidia15677 Actinidia chinensis HOM05D006429 ORTHO05D008173 5.1e-33 145.2 166 53.6
Gohir.A07G027600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 6.6e-33 144.8 182 48.9
TPR.G15678 Trifolium pratense HOM05D006429 ORTHO05D008173 1.5e-32 143.7 164 51.8
PGR044G2505 Punica granatum HOM05D006429 ORTHO05D008173 9.5e-32 141.0 166 51.2
Sc23g0006860 Simmondsia chinensis HOM05D006429 ORTHO05D008173 2.1e-31 139.8 165 49.7
Migut.E01793 Erythranthe guttata HOM05D006429 ORTHO05D008173 3.6e-31 139.0 154 50.0
Aqoxy7G02159 Aquilegia oxysepala HOM05D006429 ORTHO05D008173 4.7e-31 138.7 163 50.3
PSO455G0002 Papaver somniferum HOM05D006429 ORTHO05D008173 1.8e-30 136.7 145 52.4
Solyc06g066090.3 Solanum lycopersicum HOM05D006429 ORTHO05D008173 1.8e-30 136.7 129 59.7
Nitab4.5_0005761g0120 Nicotiana tabacum HOM05D006429 ORTHO05D008173 2.4e-30 136.3 138 55.8
SGA_v2.0_scaffold163G37988 Striga asiatica HOM05D006429 ORTHO05D008173 2.4e-30 136.3 145 54.5
Sed0015882 Sechium edule HOM05D006429 ORTHO05D008173 3.1e-30 136.0 126 59.5
PSO170G4475 Papaver somniferum HOM05D006429 ORTHO05D008173 5.2e-30 135.2 145 51.7
HanXRQChr13g0403421 Helianthus annuus HOM05D006429 ORTHO05D008173 6.8e-30 134.8 134 52.2
Sopen06g024570 Solanum pennellii HOM05D006429 ORTHO05D008173 6.8e-30 134.8 125 58.4
MSTRG.1719 Avicennia marina HOM05D006429 ORTHO05D008173 2.0e-29 133.3 157 48.4
Duzib187G0955 Durio zibethinus HOM05D006429 ORTHO05D008173 3.4e-29 132.5 167 50.9
ECA233G5545 Erigeron canadensis HOM05D006429 ORTHO05D008173 3.4e-29 132.5 121 54.5
Nitab4.5_0000109g0260 Nicotiana tabacum HOM05D006429 ORTHO05D008173 4.4e-29 132.1 132 55.3
MBI01_g37798_MAGBIO Magnolia biondii HOM05D006429 ORTHO05D008173 5.8e-29 131.7 123 56.9
Peaxi162Scf00643g00324 Petunia axillaris HOM05D006429 ORTHO05D008173 1.9e-27 126.7 120 58.3
Hund04535 Selenicereus undatus HOM05D006429 ORTHO05D008173 1.2e-26 124.0 164 46.3
ClCG05G017010 Citrullus lanatus HOM05D006429 ORTHO05D008173 1.6e-26 123.6 201 43.3
Os03g0851900 Oryza sativa ssp. japonica HOM05D006429 ORTHO05D008173 6.0e-26 121.7 126 51.6
THA.LOC104803671 Tarenaya hassleriana HOM05D006429 ORTHO05D008173 1.0e-25 120.9 166 46.4
Sp4g04810 Schrenkiella parvula HOM05D006429 ORTHO05D008173 3.9e-25 119.0 169 45.0
A09p55620 Brassica napus HOM05D006429 ORTHO05D008173 6.6e-25 118.2 165 43.6
BraA09t40964Z Brassica rapa HOM05D006429 ORTHO05D008173 8.6e-25 117.9 165 43.6
C08p38620 Brassica napus HOM05D006429 ORTHO05D008173 2.5e-24 116.3 165 43.0
DCAR_001526 Daucus carota HOM05D006429 ORTHO05D008173 3.3e-24 115.9 135 47.4
SalBow1G3525 Salvia bowleyana HOM05D006429 ORTHO05D008173 3.3e-24 115.9 157 44.6
BcaC07g40864 Brassica carinata HOM05D006429 ORTHO05D008173 4.3e-24 115.5 165 44.2
BolC8t51433H Brassica oleracea HOM05D006429 ORTHO05D008173 4.3e-24 115.5 165 44.2
Thhalv10000103m.g Eutrema salsugineum HOM05D006429 ORTHO05D008173 4.3e-24 115.5 170 44.1
Aa31LG4G9870 Aethionema arabicum HOM05D006429 ORTHO05D008173 2.8e-23 112.8 139 47.5
HPP92_009845 Vanilla planifolia HOM05D006429 ORTHO05D008173 8.1e-23 111.3 141 45.4
CARHR115890 Cardamine hirsuta HOM05D006429 ORTHO05D008173 1.8e-22 110.2 167 42.5
AT2G25530 Arabidopsis thaliana HOM05D006429 ORTHO05D008173 4.0e-22 109.0 124 49.2
ATR0322G019 Amborella trichopoda HOM05D006429 ORTHO05D008173 5.2e-22 108.6 148 45.3
Carub.0004s0522 Capsella rubella HOM05D006429 ORTHO05D008173 5.2e-22 108.6 131 48.1
Sabra06G0197200 Salix brachista HOM05D006429 ORTHO05D008173 5.2e-22 108.6 124 47.6
BcaB08g35187 Brassica carinata HOM05D006429 ORTHO05D008173 9.0e-22 107.8 168 40.5
Ah.12g064110 Amaranthus hybridus HOM05D006429 ORTHO05D008173 9.9e-21 104.4 145 44.8
vmacro05185 Vaccinium macrocarpon HOM05D006429 ORTHO05D008173 9.9e-21 104.4 168 41.1
Atru.chr7.2397 Acer truncatum HOM05D006429 ORTHO05D008173 2.9e-20 102.8 125 48.8
Potri.006G252300 Populus trichocarpa HOM05D006429 ORTHO05D008173 9.3e-19 97.8 124 44.4
EL10Ac2g02614 Beta vulgaris HOM05D006429 ORTHO05D008173 1.0e-17 94.4 163 39.3
SEGI_08944 Sequoiadendron giganteum HOM05D006429 ORTHO05D008173 7.3e-16 88.2 113 43.4
AUR62030635 Chenopodium quinoa HOM05D006429 ORTHO05D008173 9.6e-16 87.8 164 37.2
Lsat_1_v5_gn_6_22441 Lactuca sativa HOM05D006429 ORTHO05D008173 2.1e-15 86.7 79 51.9
AUR62024907 Chenopodium quinoa HOM05D006429 ORTHO05D008173 6.2e-15 85.1 125 40.8
unitig_37.g12933 Utricularia gibba HOM05D006429 ORTHO05D008173 1.8e-14 83.6 87 50.6
Lalb_Chr24g0402221 Lupinus albus HOM05D006429 ORTHO05D008173 1.2e-13 80.9 79 53.2
SalBow1G7385 Salvia bowleyana HOM05D040611 ORTHO05D037502 2.2e-12 76.6 60 61.7
PGSC0003DMG400020474 Solanum tuberosum HOM05D006429 ORTHO05D008173 1.4e-11 73.9 70 57.1
AagrBONN_evm.TU.Sc2ySwM_344.5555 Anthoceros agrestis HOM05D006429 ORTHO05D008173 5.4e-11 72.0 123 34.1
Mapoly0085s0040 Marchantia polymorpha HOM05D006429 ORTHO05D008173 2.7e-10 69.7 121 33.1
Zm00001eb064690 Zea mays HOM05D006429 ORTHO05D008173 1.3e-09 67.4 79 44.3
Pp3c7_12170 Physcomitrium patens HOM05D006429 ORTHO05D008173 1.1e-08 64.3 122 33.6
RcHm_v2.0_Chr5g0072341 Rosa chinensis HOM05D006429 ORTHO05D345740 1.3e-07 60.8 89 48.3
SMO228G0075 Selaginella moellendorffii HOM05D006429 ORTHO05D008173 4.8e-07 58.9 125 33.6


User provided reference genes

Program Settings