Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3490 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.6e-73 276.9 129 100.0
FvH4_3g39320 Fragaria vesca HOM05D000007 ORTHO05D000039 1.3e-35 153.3 79 89.9
FAN06G4185 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.7e-30 134.8 74 86.5
FvH4_7g06030 Fragaria vesca HOM05D000007 ORTHO05D000039 1.8e-29 132.9 76 82.9
RcHm_v2.0_Chr5g0061121 Rosa chinensis HOM05D000007 ORTHO05D000039 2.8e-27 125.6 79 77.2
FAN25G1711 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.3e-15 85.5 69 60.9
FvH4_3g41900 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-14 83.6 69 59.4
FAN11G3185 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-14 83.6 69 59.4
FAN11G3730 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-14 83.6 110 46.4
RcHm_v2.0_Chr5g0075091 Rosa chinensis HOM05D000007 ORTHO05D000039 1.6e-14 83.2 69 63.8
FAN25G3153 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.6e-14 82.0 75 61.3
FvH4_3g42380 Fragaria vesca HOM05D000007 ORTHO05D000039 6.2e-14 81.3 110 45.5
FAN21G0628 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.2e-14 81.3 73 52.1
FAN28G1507 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.0e-14 80.9 77 55.8
FvH4_3g42390 Fragaria vesca HOM05D000007 ORTHO05D000039 1.1e-13 80.5 77 55.8
FAN11G1975 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.3e-13 79.3 70 52.9
FvH4_3g18972 Fragaria vesca HOM05D000007 ORTHO05D000039 3.1e-13 79.0 70 52.9
FAN11G0403 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.1e-13 79.0 69 56.5
RcHm_v2.0_Chr5g0031731 Rosa chinensis HOM05D000007 ORTHO05D000039 3.1e-13 79.0 71 52.1
FvH4_3g18920 Fragaria vesca HOM05D000007 ORTHO05D000039 6.8e-13 77.8 69 56.5
RcHm_v2.0_Chr5g0031751 Rosa chinensis HOM05D000007 ORTHO05D000039 6.8e-13 77.8 74 52.7
FvH4_3g18860 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-12 77.0 63 58.7
FvH4_3g39330 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-12 77.0 72 56.9
FAN11G3224 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-12 77.0 72 56.9
FAN21G2298 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-12 77.0 72 56.9
FAN21G2633 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.0e-12 76.3 65 55.4
Prupe.6G096300 Prunus persica HOM05D000007 ORTHO05D000039 2.0e-12 76.3 72 61.1
MD11G1031100 Malus domestica HOM05D000007 ORTHO05D000039 2.6e-12 75.9 74 52.7
FAN11G1650 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.4e-12 75.5 74 52.7
RcHm_v2.0_Chr5g0075101 Rosa chinensis HOM05D000007 ORTHO05D000039 3.4e-12 75.5 69 59.4
FAN16G0092 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.4e-12 75.1 102 42.2
FAN11G1989 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.5e-12 74.3 65 50.8
FAN16G0793 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.5e-12 74.3 65 56.9
RcHm_v2.0_Chr5g0031771 Rosa chinensis HOM05D000007 ORTHO05D000039 7.5e-12 74.3 69 55.1
FvH4_3g18970 Fragaria vesca HOM05D000007 ORTHO05D000039 9.8e-12 73.9 65 50.8
RcHm_v2.0_Chr5g0075881 Rosa chinensis HOM05D000007 ORTHO05D000039 9.8e-12 73.9 77 54.5
FAN16G0172 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.3e-11 73.6 76 55.3
FAN21G0203 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.3e-11 73.6 136 36.8
FAN21G3753 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.3e-11 73.6 136 36.8
Prupe.5G081900 Prunus persica HOM05D000007 ORTHO05D000039 1.3e-11 73.6 75 53.3
FvH4_3g16860 Fragaria vesca HOM05D000007 ORTHO05D000039 1.7e-11 73.2 65 56.9
FAN16G0767 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.7e-11 73.2 65 56.9
FvH4_3g18890 Fragaria vesca HOM05D000007 ORTHO05D000039 2.2e-11 72.8 65 52.3
FAN11G0280 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.2e-11 72.8 43 83.7
FAN11G0632 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.2e-11 72.8 65 52.3
FAN11G3498 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.2e-11 72.8 65 56.9
FAN21G2178 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.2e-11 72.8 69 52.2
RcHm_v2.0_Chr5g0031741 Rosa chinensis HOM05D000007 ORTHO05D000039 3.7e-11 72.0 103 41.7
Prupe.4G221400 Prunus persica HOM05D000007 ORTHO05D000039 8.3e-11 70.9 71 49.3
Prupe.5G081800 Prunus persica HOM05D000007 ORTHO05D000039 1.6e-09 66.6 76 44.7
Prupe.4G151100 Prunus persica HOM05D000007 ORTHO05D000039 2.0e-09 66.2 64 51.6
FAN10G2956 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.5e-09 65.5 39 82.1
RcHm_v2.0_Chr1g0348511 Rosa chinensis HOM05D000007 ORTHO05D000039 3.5e-09 65.5 102 36.3
FvH4_3g16840 Fragaria vesca HOM05D000007 ORTHO05D000039 6.0e-09 64.7 74 44.6
FvH4_3g18910 Fragaria vesca HOM05D000007 ORTHO05D000039 6.0e-09 64.7 69 49.3
FvH4_3g18971 Fragaria vesca HOM05D000007 ORTHO05D000039 6.0e-09 64.7 63 55.6
FAN11G3667 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.0e-09 64.7 74 44.6
FAN16G3299 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.0e-09 64.7 74 44.6
Prupe.4G151000 Prunus persica HOM05D000007 ORTHO05D000039 6.0e-09 64.7 88 40.9
RcHm_v2.0_Chr5g0031801 Rosa chinensis HOM05D000007 ORTHO05D000039 6.0e-09 64.7 65 46.2
MD03G1028300 Malus domestica HOM05D000007 ORTHO05D000039 7.8e-09 64.3 74 52.7
FvH4_3g18911 Fragaria vesca HOM05D000007 ORTHO05D000039 1.0e-08 63.9 66 45.5
FAN11G2343 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.7e-08 63.2 66 45.5
Prupe.4G150700 Prunus persica HOM05D000007 ORTHO05D000039 1.7e-08 63.2 70 45.7
MD03G1028400 Malus domestica HOM05D000007 ORTHO05D000039 3.0e-08 62.4 76 46.1
QL07p003322 Quercus lobata HOM05D000007 ORTHO05D000039 3.9e-08 62.0 72 47.2
QL07p003314 Quercus lobata HOM05D000007 ORTHO05D000039 5.0e-08 61.6 86 44.2
FvH4_3g18950 Fragaria vesca HOM05D000007 ORTHO05D000039 6.6e-08 61.2 65 53.8
FAN11G3242 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.6e-08 61.2 65 52.3
QL04p005232 Quercus lobata HOM05D000007 ORTHO05D000039 6.6e-08 61.2 73 47.9
FAN21G2501 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.6e-08 60.8 66 43.9
MD11G1031700 Malus domestica HOM05D000007 ORTHO05D000039 1.9e-07 59.7 74 45.9
Prupe.4G190200 Prunus persica HOM05D000007 ORTHO05D000039 2.5e-07 59.3 82 40.2
RcHm_v2.0_Chr5g0054431 Rosa chinensis HOM05D000007 ORTHO05D000039 2.5e-07 59.3 73 47.9
FAN19G0203 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.3e-07 58.9 69 47.8
MD09G1091100 Malus domestica HOM05D000007 ORTHO05D000039 3.3e-07 58.9 68 51.5
FvH4_1g04040 Fragaria vesca HOM05D000007 ORTHO05D000039 9.5e-07 57.4 69 46.4
FAN11G2583 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.5e-07 57.4 64 46.9
QL03p014472 Quercus lobata HOM05D000007 ORTHO05D000039 9.5e-07 57.4 66 40.9
QL03p015085 Quercus lobata HOM05D000007 ORTHO05D000039 9.5e-07 57.4 66 40.9
QL07p003114 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-06 56.6 66 45.5
QL11p003899 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-06 56.6 74 37.8
QL11p003050 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-06 55.8 69 40.6
MD03G1027200 Malus domestica HOM05D000007 ORTHO05D000039 3.6e-06 55.5 64 51.6
FAN28G1446 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.7e-06 55.1 67 47.8
Lj1P663T62 Lonicera japonica HOM05D000007 ORTHO05D000039 4.7e-06 55.1 69 47.8
QL11p003889 Quercus lobata HOM05D000007 ORTHO05D000039 6.2e-06 54.7 69 39.1


User provided reference genes

Program Settings