Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3424 Fragaria x ananassa HOM05D013605 ORTHO05D029654 1.6e-244 849.0 426 100.0
FvH4_3g18090 Fragaria vesca HOM05D013605 ORTHO05D029654 4.3e-229 797.7 415 96.9
FvH4_2g40190 Fragaria vesca HOM05D013605 ORTHO05D046327 1.0e-33 148.7 418 31.6
FAN15G3072 Fragaria x ananassa HOM05D013605 ORTHO05D002548 1.8e-33 147.9 384 33.1
RcHm_v2.0_Chr5g0003071 Rosa chinensis HOM05D003413 ORTHO05D029654 1.5e-32 144.8 254 39.4
FAN20G2550 Fragaria x ananassa HOM05D013605 ORTHO05D046327 1.7e-31 141.4 386 32.4
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.3e-30 136.3 303 32.3
FAN21G0228 Fragaria x ananassa HOM05D013605 ORTHO05D029654 1.2e-26 125.2 319 32.9
FAN11G0573 Fragaria x ananassa HOM05D013605 ORTHO05D208469 2.3e-25 120.9 313 31.0
FvH4_7g30801 Fragaria vesca HOM05D001354 ORTHO05D046525 2.7e-18 97.4 162 34.0
FvH4_1g01201 Fragaria vesca HOM05D040807 ORTHO05D196515 4.4e-16 90.1 330 25.8
FvH4_1g20821 Fragaria vesca HOM05D040807 ORTHO05D196760 1.4e-14 85.1 259 24.7
FvH4_2g04711 Fragaria vesca HOM05D013605 ORTHO05D197542 1.4e-14 85.1 209 34.9
FvH4_3g37840 Fragaria vesca HOM05D009721 ORTHO05D029620 7.0e-14 82.8 154 35.1
FAN03G0890 Fragaria x ananassa HOM05D001354 ORTHO05D046525 2.0e-13 81.3 151 31.8
FvH4_6g30500 Fragaria vesca HOM05D013605 ORTHO05D197864 1.0e-12 79.0 152 36.8
PRCOL_00003194 Prasinoderma coloniale HOM05D003413 ORTHO05D004197 8.5e-12 75.9 172 30.8
THA.LOC104812691 Tarenaya hassleriana HOM05D003413 ORTHO05D004197 1.1e-11 75.5 186 31.7
THA.LOC104814351 Tarenaya hassleriana HOM05D003413 ORTHO05D004197 2.5e-11 74.3 175 32.0
AL1G24710 Arabidopsis lyrata HOM05D003413 ORTHO05D004197 4.2e-11 73.6 164 32.9
AT1G13060 Arabidopsis thaliana HOM05D003413 ORTHO05D004197 4.2e-11 73.6 164 32.9
Aa31LG2G6170 Aethionema arabicum HOM05D003413 ORTHO05D004197 5.5e-11 73.2 186 30.6
Carub.0001s1281 Capsella rubella HOM05D003413 ORTHO05D004197 9.4e-11 72.4 164 32.3
BraA06t24062Z Brassica rapa HOM05D003413 ORTHO05D004197 1.2e-10 72.0 164 32.3
Thhalv10008454m.g Eutrema salsugineum HOM05D003413 ORTHO05D004197 1.2e-10 72.0 164 32.3
Carub.0005s0426 Capsella rubella HOM05D003413 ORTHO05D004197 1.6e-10 71.6 164 31.7
Mapoly0021s0078 Marchantia polymorpha HOM05D003413 ORTHO05D004197 1.6e-10 71.6 187 27.8
AL5G15110 Arabidopsis lyrata HOM05D003413 ORTHO05D004197 2.1e-10 71.2 164 31.7
Oeu056675.1 Olea europaea HOM05D003413 ORTHO05D004197 2.1e-10 71.2 172 29.7
Actinidia30663 Actinidia chinensis HOM05D003413 ORTHO05D004197 2.7e-10 70.9 183 28.4
AT3G26340 Arabidopsis thaliana HOM05D003413 ORTHO05D004197 2.7e-10 70.9 164 31.7
DCAR_026471 Daucus carota HOM05D003413 ORTHO05D004197 2.7e-10 70.9 172 29.1
Sp2g15490 Schrenkiella parvula HOM05D003413 ORTHO05D004197 2.7e-10 70.9 164 31.7
SMO147G0030 Selaginella moellendorffii HOM05D003413 ORTHO05D004197 2.7e-10 70.9 174 28.7
BcaB08g34231 Brassica carinata HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
BcaC05g25088 Brassica carinata HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
BcaNung06606 Brassica carinata HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
A06p08660 Brassica napus HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
A08p32480 Brassica napus HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
A09p63450 Brassica napus HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
C08p15800 Brassica napus HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
BolC8t49206H Brassica oleracea HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
BraA08t35172Z Brassica rapa HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
ECA246G0095 Erigeron canadensis HOM05D003413 ORTHO05D004197 3.6e-10 70.5 161 29.8
Thhalv10004762m.g Eutrema salsugineum HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
Gohir.D04G181800 Gossypium hirsutum HOM05D003413 ORTHO05D004197 3.6e-10 70.5 172 29.1
Gorai.012G175200 Gossypium raimondii HOM05D003413 ORTHO05D004197 3.6e-10 70.5 172 29.1
Sp1g11610 Schrenkiella parvula HOM05D003413 ORTHO05D004197 3.6e-10 70.5 164 31.7
C08p46910 Brassica napus HOM05D003413 ORTHO05D004197 4.7e-10 70.1 164 31.7
BolC8t52226H Brassica oleracea HOM05D003413 ORTHO05D004197 4.7e-10 70.1 164 31.7
BraA09t41695Z Brassica rapa HOM05D003413 ORTHO05D004197 4.7e-10 70.1 164 31.7
CARHR147350 Cardamine hirsuta HOM05D003413 ORTHO05D004197 4.7e-10 70.1 164 31.7
CARHR013390 Cardamine hirsuta HOM05D003413 ORTHO05D004197 6.1e-10 69.7 164 31.7
Rhsim12G0028500 Rhododendron simsii HOM05D003413 ORTHO05D004197 6.1e-10 69.7 183 27.3
TAR629G2699 Trochodendron aralioides HOM05D003413 ORTHO05D004197 6.1e-10 69.7 161 29.2
Aa31LG1G1740 Aethionema arabicum HOM05D003413 ORTHO05D004197 8.0e-10 69.3 186 29.6
Cpa.g.sc43.24 Carica papaya HOM05D003413 ORTHO05D004197 8.0e-10 69.3 172 27.9
Sed0004676 Sechium edule HOM05D003413 ORTHO05D004197 8.0e-10 69.3 161 29.2
Hund25449 Selenicereus undatus HOM05D003413 ORTHO05D004197 8.0e-10 69.3 172 27.9
Duzib251G0571 Durio zibethinus HOM05D003413 ORTHO05D004197 1.0e-09 68.9 172 27.9
Sed0010714 Sechium edule HOM05D003413 ORTHO05D004197 1.0e-09 68.9 161 29.8
vmacro20451 Vaccinium macrocarpon HOM05D003413 ORTHO05D004197 1.0e-09 68.9 172 29.1
Cfa009337 Carpinus fangiana HOM05D003413 ORTHO05D004197 1.4e-09 68.6 172 27.9
Cfa020602 Carpinus fangiana HOM05D003413 ORTHO05D004197 1.4e-09 68.6 172 27.9
Haze_26535 Corylus avellana HOM05D003413 ORTHO05D004197 1.4e-09 68.6 159 30.2
SGA_v2.0_scaffold87G27141 Striga asiatica HOM05D003413 ORTHO05D004197 1.4e-09 68.6 161 29.2
CSS0015662 Camellia sinensis var. sinensis HOM05D003413 ORTHO05D004197 1.8e-09 68.2 172 28.5
CSS0027762 Camellia sinensis var. sinensis HOM05D003413 ORTHO05D004197 1.8e-09 68.2 172 28.5
Cc11_g16770 Coffea canephora HOM05D003413 ORTHO05D004197 1.8e-09 68.2 161 29.2
Gohir.A04G138900 Gossypium hirsutum HOM05D003413 ORTHO05D004197 1.8e-09 68.2 161 29.2
QL04p035333 Quercus lobata HOM05D003413 ORTHO05D004197 1.8e-09 68.2 161 28.6
SGA_v2.0_scaffold96G29099 Striga asiatica HOM05D003413 ORTHO05D004197 1.8e-09 68.2 181 28.2
GSVIVG01010375001 Vitis vinifera HOM05D003413 ORTHO05D004197 1.8e-09 68.2 172 28.5
Ah.03g136290 Amaranthus hybridus HOM05D003413 ORTHO05D004197 2.3e-09 67.8 161 28.6
ATR1120G105 Amborella trichopoda HOM05D003413 ORTHO05D004197 2.3e-09 67.8 180 27.8
Eucgr.H04655 Eucalyptus grandis HOM05D003413 ORTHO05D004197 2.3e-09 67.8 161 29.2
Lj3C1066T5 Lonicera japonica HOM05D003413 ORTHO05D004197 2.3e-09 67.8 161 29.8
PGR119G0878 Punica granatum HOM05D003413 ORTHO05D004197 2.3e-09 67.8 172 29.1
HPP92_020236 Vanilla planifolia HOM05D003413 ORTHO05D004197 2.3e-09 67.8 172 28.5
Actinidia08079 Actinidia chinensis HOM05D003413 ORTHO05D004197 3.0e-09 67.4 183 26.8
Aqoxy5G03439 Aquilegia oxysepala HOM05D003413 ORTHO05D004197 3.0e-09 67.4 161 28.6
CiPaw.06G100800 Carya illinoinensis HOM05D003413 ORTHO05D004197 3.0e-09 67.4 172 27.3
CsaV3_5G030400 Cucumis sativus L. HOM05D003413 ORTHO05D004197 3.0e-09 67.4 172 27.9
Lsat_1_v5_gn_8_149501 Lactuca sativa HOM05D003413 ORTHO05D004197 3.0e-09 67.4 161 29.2
Hund21776 Selenicereus undatus HOM05D003413 ORTHO05D004197 3.0e-09 67.4 123 30.1
Thecc.02G276700 Theobroma cacao HOM05D003413 ORTHO05D004197 3.0e-09 67.4 172 28.5
arahy.Tifrunner.gnm1.ann1.DD2PIM Arachis hypogaea HOM05D003413 ORTHO05D004197 4.0e-09 67.0 184 28.8
CAN.G694.91 Capsicum annuum HOM05D003413 ORTHO05D004197 4.0e-09 67.0 161 28.6
ClCG08G010150 Citrullus lanatus HOM05D003413 ORTHO05D004197 4.0e-09 67.0 161 28.0
Gohir.A01G160500 Gossypium hirsutum HOM05D003413 ORTHO05D004197 4.0e-09 67.0 172 27.9
Gohir.D01G155200 Gossypium hirsutum HOM05D003413 ORTHO05D004197 4.0e-09 67.0 172 27.9
Gorai.002G192400 Gossypium raimondii HOM05D003413 ORTHO05D004197 4.0e-09 67.0 172 27.9
Lj6A824T74 Lonicera japonica HOM05D003413 ORTHO05D004197 4.0e-09 67.0 184 27.7
Lj1g0010419 Lotus japonicus HOM05D003413 ORTHO05D004197 4.0e-09 67.0 161 29.2
Oeu049152.1 Olea europaea HOM05D003413 ORTHO05D004197 4.0e-09 67.0 169 29.0
Atru.chr11.2293 Acer truncatum HOM05D003413 ORTHO05D004197 5.2e-09 66.6 172 27.9
AagrBONN_evm.TU.Sc2ySwM_117.841 Anthoceros agrestis HOM05D003413 ORTHO05D004197 5.2e-09 66.6 125 30.4
arahy.Tifrunner.gnm1.ann1.3BP915 Arachis hypogaea HOM05D001045 ORTHO05D004836 5.2e-09 66.6 161 28.6
AUR62005593 Chenopodium quinoa HOM05D003413 ORTHO05D004197 5.2e-09 66.6 161 28.6
AUR62024135 Chenopodium quinoa HOM05D003413 ORTHO05D004197 5.2e-09 66.6 161 28.6
Haze_12385 Corylus avellana HOM05D003413 ORTHO05D004197 5.2e-09 66.6 134 29.1
Dinv14816 Davidia involucrata HOM05D003413 ORTHO05D004197 5.2e-09 66.6 161 29.2
Migut.E00028 Erythranthe guttata HOM05D003413 ORTHO05D004197 5.2e-09 66.6 172 27.3
Glyma.04G194700 Glycine max HOM05D003413 ORTHO05D004197 5.2e-09 66.6 161 28.6
Glyma.06G171200 Glycine max HOM05D003413 ORTHO05D004197 5.2e-09 66.6 161 28.6
Medtr3g089040 Medicago truncatula HOM05D003413 ORTHO05D004197 5.2e-09 66.6 161 29.8
Nn3g16510 Nelumbo nucifera HOM05D003413 ORTHO05D004197 5.2e-09 66.6 172 27.3
Phvul.009G167300 Phaseolus vulgaris HOM05D003413 ORTHO05D004197 5.2e-09 66.6 161 28.6
CiPaw.05G112700 Carya illinoinensis HOM05D003413 ORTHO05D004197 6.8e-09 66.2 161 28.0
CsaV3_6G032330 Cucumis sativus L. HOM05D003413 ORTHO05D004197 6.8e-09 66.2 196 26.5
Lalb_Chr12g0202151 Lupinus albus HOM05D003413 ORTHO05D004197 6.8e-09 66.2 161 28.6
Manes.12G013500 Manihot esculenta HOM05D003413 ORTHO05D004197 6.8e-09 66.2 172 27.3
Nitab4.5_0012482g0010 Nicotiana tabacum HOM05D003413 ORTHO05D004197 6.8e-09 66.2 180 27.8
PSO063G0094 Papaver somniferum HOM05D003413 ORTHO05D004197 6.8e-09 66.2 161 28.0
Psat0s14g0120 Pisum sativum HOM05D003413 ORTHO05D004197 6.8e-09 66.2 161 29.2
Potri.008G177000 Populus trichocarpa HOM05D003413 ORTHO05D004197 6.8e-09 66.2 172 27.3
Sc01g0009880 Simmondsia chinensis HOM05D003413 ORTHO05D004197 6.8e-09 66.2 172 27.3
Solyc05g056160.3 Solanum lycopersicum HOM05D003413 ORTHO05D004197 6.8e-09 66.2 161 28.6
Sopen05g034570 Solanum pennellii HOM05D003413 ORTHO05D004197 6.8e-09 66.2 161 28.6
PGSC0003DMG400023337 Solanum tuberosum HOM05D003413 ORTHO05D004197 6.8e-09 66.2 161 28.6
TWI18G0413 Tripterygium wilfordii HOM05D003413 ORTHO05D004197 6.8e-09 66.2 172 27.9
TWI36G0673 Tripterygium wilfordii HOM05D003413 ORTHO05D004197 6.8e-09 66.2 172 27.9
VMungo1309G0564 Vigna mungo HOM05D003413 ORTHO05D004197 6.8e-09 66.2 161 28.0
C05p10270 Brassica napus HOM05D003413 ORTHO05D004197 8.8e-09 65.9 165 31.5
BolC5t29773H Brassica oleracea HOM05D003413 ORTHO05D004197 8.8e-09 65.9 165 31.5
Ca_24508_v3 Cicer arietinum L. HOM05D003413 ORTHO05D004197 8.8e-09 65.9 161 28.6
COL.COLO4_20354 Corchorus olitorius HOM05D003413 ORTHO05D004197 8.8e-09 65.9 161 28.6
Dinv10975 Davidia involucrata HOM05D003413 ORTHO05D004197 8.8e-09 65.9 161 28.6
FAN17G2448 Fragaria x ananassa HOM05D003413 ORTHO05D004197 8.8e-09 65.9 161 28.6
FAN22G2268 Fragaria x ananassa HOM05D003413 ORTHO05D004197 8.8e-09 65.9 161 28.6
MD10G1030600 Malus domestica HOM05D003413 ORTHO05D004197 8.8e-09 65.9 161 28.6
Manes.13G017700 Manihot esculenta HOM05D003413 ORTHO05D004197 8.8e-09 65.9 172 27.3
Pp3c11_2970 Physcomitrium patens HOM05D003413 ORTHO05D004197 8.8e-09 65.9 177 27.1
Psat6g126880 Pisum sativum HOM05D003413 ORTHO05D004197 8.8e-09 65.9 123 30.1
RcHm_v2.0_Chr4g0430701 Rosa chinensis HOM05D003413 ORTHO05D004197 8.8e-09 65.9 161 28.6
Sed0019386 Sechium edule HOM05D003413 ORTHO05D004197 8.8e-09 65.9 172 27.3
Duzib268G0982 Durio zibethinus HOM05D003413 ORTHO05D004197 1.2e-08 65.5 172 27.3
MD16G1116800 Malus domestica HOM05D003413 ORTHO05D004197 1.2e-08 65.5 161 28.6
Nitab4.5_0000582g0200 Nicotiana tabacum HOM05D003413 ORTHO05D004197 1.2e-08 65.5 161 28.6
Peaxi162Scf00858g00310 Petunia axillaris HOM05D003413 ORTHO05D004197 1.2e-08 65.5 161 28.6
Potri.010G058100 Populus trichocarpa HOM05D003413 ORTHO05D004197 1.2e-08 65.5 172 27.3
Prupe.1G229300 Prunus persica HOM05D003413 ORTHO05D004197 1.2e-08 65.5 161 28.6
unitig_52.g17190 Utricularia gibba HOM05D003413 ORTHO05D004197 1.2e-08 65.5 184 27.2
unitig_62.g23655 Utricularia gibba HOM05D003413 ORTHO05D004197 1.2e-08 65.5 161 28.6
Zm00001eb376670 Zea mays HOM05D003413 ORTHO05D004197 1.2e-08 65.5 161 28.6
CANSAT01G2316 Cannabis sativa HOM05D003413 ORTHO05D004197 1.5e-08 65.1 161 28.0
FAN12G0555 Fragaria x ananassa HOM05D003413 ORTHO05D004197 1.5e-08 65.1 161 28.6
HanXRQChr08g0207581 Helianthus annuus HOM05D003413 ORTHO05D004197 1.5e-08 65.1 161 28.0
SalBow1G2866 Salvia bowleyana HOM05D003413 ORTHO05D004197 1.5e-08 65.1 161 28.6
arahy.Tifrunner.gnm1.ann1.R6HZSL Arachis hypogaea HOM05D003413 ORTHO05D004197 2.0e-08 64.7 123 30.1
MSTRG.2454 Avicennia marina HOM05D003413 ORTHO05D004197 2.0e-08 64.7 161 28.6
HanXRQChr12g0372411 Helianthus annuus HOM05D003413 ORTHO05D004197 2.0e-08 64.7 161 28.0
Nitab4.5_0000071g0160 Nicotiana tabacum HOM05D003413 ORTHO05D004197 2.6e-08 64.3 167 28.7
PSO782G4279 Papaver somniferum HOM05D003413 ORTHO05D004197 2.6e-08 64.3 161 27.3
vmacro01074 Vaccinium macrocarpon HOM05D003413 ORTHO05D004197 2.6e-08 64.3 145 28.3
Nitab4.5_0004212g0060 Nicotiana tabacum HOM05D003413 ORTHO05D004197 3.4e-08 63.9 161 28.0
ECA233G4198 Erigeron canadensis HOM05D003413 ORTHO05D004197 4.4e-08 63.5 161 28.0
MCO06G264 Micromonas commoda HOM05D003413 ORTHO05D004197 4.4e-08 63.5 179 26.8
Lalb_Chr07g0183311 Lupinus albus HOM05D003413 ORTHO05D004197 5.7e-08 63.2 161 28.0
ClCG11G013810 Citrullus lanatus HOM05D003413 ORTHO05D004197 7.5e-08 62.8 134 28.4
Os06g0153800 Oryza sativa ssp. japonica HOM05D003413 ORTHO05D004197 7.5e-08 62.8 172 27.9
Sabra08G0134800 Salix brachista HOM05D003413 ORTHO05D004197 9.8e-08 62.4 134 28.4
Sabra10G0047300 Salix brachista HOM05D003413 ORTHO05D004197 1.3e-07 62.0 140 27.9
Lalb_Chr06g0172271 Lupinus albus HOM05D003413 ORTHO05D004197 3.7e-07 60.5 98 33.7
Actinidia09660 Actinidia chinensis HOM05D003413 ORTHO05D004197 8.3e-07 59.3 98 33.7
Pp3c18_17380 Physcomitrium patens HOM05D003380 ORTHO05D004232 1.1e-06 58.9 106 33.0
Dinv12605 Davidia involucrata HOM05D003380 ORTHO05D004232 1.8e-06 58.2 209 26.3
EL10Ac6g13472 Beta vulgaris HOM05D003413 ORTHO05D004197 3.1e-06 57.4 144 28.5
MELO3C011449.2 Cucumis melo HOM05D003413 ORTHO05D004197 3.1e-06 57.4 144 27.1
MBI04_g08407_MAGBIO Magnolia biondii HOM05D003413 ORTHO05D004197 4.1e-06 57.0 172 26.7
Sopen03g016110 Solanum pennellii HOM05D003413 ORTHO05D004197 4.1e-06 57.0 98 32.7
Rhsim12G0102400 Rhododendron simsii HOM05D003413 ORTHO05D004197 5.4e-06 56.6 181 26.5


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