Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3237 Fragaria x ananassa HOM05D003550 ORTHO05D004336 3.8e-72 274.6 129 100.0
FAN03G0411 Fragaria x ananassa HOM05D003550 ORTHO05D004336 8.8e-37 157.1 111 71.2
FvH4_7g03470 Fragaria vesca HOM05D003550 ORTHO05D004336 1.2e-36 156.8 111 71.2
FAN06G0346 Fragaria x ananassa HOM05D003550 ORTHO05D004336 1.2e-36 156.8 111 71.2
FAN01G2608 Fragaria x ananassa HOM05D003550 ORTHO05D004336 2.6e-36 155.6 111 70.3
FAN10G1007 Fragaria x ananassa HOM05D003550 ORTHO05D004336 2.6e-36 155.6 111 70.3
RcHm_v2.0_Chr1g0325801 Rosa chinensis HOM05D003550 ORTHO05D004336 2.8e-35 152.1 111 69.4
Prupe.2G040800 Prunus persica HOM05D003550 ORTHO05D004336 2.0e-33 146.0 111 64.9
CANSAT56G1944 Cannabis sativa HOM05D003550 ORTHO05D004336 8.6e-32 140.6 106 67.0
MD02G1282100 Malus domestica HOM05D003550 ORTHO05D004336 8.6e-32 140.6 107 64.5
COL.COLO4_20694 Corchorus olitorius HOM05D003550 ORTHO05D004336 7.2e-31 137.5 110 60.9
MD07G1048200 Malus domestica HOM05D003550 ORTHO05D004336 1.2e-30 136.7 107 63.6
Haze_03007 Corylus avellana HOM05D003550 ORTHO05D004336 1.0e-29 133.7 104 63.5
PGR031G1017 Punica granatum HOM05D003550 ORTHO05D004336 1.4e-29 133.3 106 60.4
Gohir.A05G399700 Gossypium hirsutum HOM05D003550 ORTHO05D004336 1.8e-29 132.9 111 59.5
Manes.04G157700 Manihot esculenta HOM05D003550 ORTHO05D004336 1.8e-29 132.9 107 59.8
Cfa010939 Carpinus fangiana HOM05D003550 ORTHO05D004336 2.3e-29 132.5 104 62.5
Duzib106G1351 Durio zibethinus HOM05D003550 ORTHO05D004336 2.3e-29 132.5 107 60.7
Gohir.D04G016100 Gossypium hirsutum HOM05D003550 ORTHO05D004336 4.0e-29 131.7 111 59.5
Gorai.012G018700 Gossypium raimondii HOM05D003550 ORTHO05D004336 4.0e-29 131.7 111 59.5
Potri.001G029600 Populus trichocarpa HOM05D003550 ORTHO05D004336 4.0e-29 131.7 106 60.4
QL04p017759 Quercus lobata HOM05D003550 ORTHO05D004336 4.0e-29 131.7 107 60.7
Duzib114G0877 Durio zibethinus HOM05D003550 ORTHO05D004336 5.2e-29 131.3 107 60.7
TWI15G0170 Tripterygium wilfordii HOM05D003550 ORTHO05D004336 6.8e-29 131.0 111 57.7
TAR623G1672 Trochodendron aralioides HOM05D003550 ORTHO05D004336 1.2e-28 130.2 111 55.9
Aa31LG11G7760 Aethionema arabicum HOM05D003550 ORTHO05D004336 1.5e-28 129.8 119 55.5
Sabra01G0021200 Salix brachista HOM05D003550 ORTHO05D004336 1.5e-28 129.8 106 59.4
Atru.chr12.1267 Acer truncatum HOM05D003550 ORTHO05D004336 2.0e-28 129.4 114 53.5
Hund13381 Selenicereus undatus HOM05D003550 ORTHO05D004336 2.0e-28 129.4 110 56.4
CiPaw.14G008600 Carya illinoinensis HOM05D003550 ORTHO05D004336 2.6e-28 129.0 122 55.7
Ciclev10000023m.g Citrus clementina HOM05D003550 ORTHO05D004336 2.6e-28 129.0 106 60.4
Glyma.11G157400 Glycine max HOM05D003550 ORTHO05D004336 4.4e-28 128.3 107 59.8
GSVIVG01036651001 Vitis vinifera HOM05D003550 ORTHO05D004336 4.4e-28 128.3 106 57.5
AT5G13530 Arabidopsis thaliana HOM05D003550 ORTHO05D004336 5.7e-28 127.9 110 59.1
Thhalv10012422m.g Eutrema salsugineum HOM05D003550 ORTHO05D004336 5.7e-28 127.9 110 59.1
Phvul.005G025000 Phaseolus vulgaris HOM05D003550 ORTHO05D004336 7.5e-28 127.5 107 59.8
Psat5g221640 Pisum sativum HOM05D003550 ORTHO05D004336 7.5e-28 127.5 111 56.8
TAR369G1080 Trochodendron aralioides HOM05D003550 ORTHO05D004336 7.5e-28 127.5 111 55.9
Gohir.A10G186900 Gossypium hirsutum HOM05D003550 ORTHO05D004336 1.7e-27 126.3 107 57.9
Gohir.D10G193900 Gossypium hirsutum HOM05D003550 ORTHO05D004336 1.7e-27 126.3 107 57.9
Gorai.011G216900 Gossypium raimondii HOM05D003550 ORTHO05D004336 1.7e-27 126.3 107 57.9
Lj3g0007376 Lotus japonicus HOM05D003550 ORTHO05D004336 1.7e-27 126.3 107 58.9
Nn7g36747 Nelumbo nucifera HOM05D003550 ORTHO05D004336 1.7e-27 126.3 111 55.9
Sp6g30490 Schrenkiella parvula HOM05D003550 ORTHO05D004336 1.7e-27 126.3 110 59.1
Thecc.10G149700 Theobroma cacao HOM05D003550 ORTHO05D004336 1.7e-27 126.3 107 58.9
TPR.G1404 Trifolium pratense HOM05D003550 ORTHO05D004336 1.7e-27 126.3 107 57.9
Carub.0006s1169 Capsella rubella HOM05D003550 ORTHO05D004336 2.2e-27 125.9 110 57.3
CARHR199910 Cardamine hirsuta HOM05D003550 ORTHO05D004336 2.2e-27 125.9 110 59.1
AL6G24150 Arabidopsis lyrata HOM05D003550 ORTHO05D004336 2.8e-27 125.6 110 58.2
DCAR_001913 Daucus carota HOM05D003550 ORTHO05D004336 2.8e-27 125.6 111 55.9
Dinv44694 Davidia involucrata HOM05D003550 ORTHO05D004336 3.7e-27 125.2 107 58.9
EL10Ac2g02773 Beta vulgaris HOM05D003550 ORTHO05D004336 6.3e-27 124.4 110 55.5
Ca_12963_v3 Cicer arietinum L. HOM05D003550 ORTHO05D004336 6.3e-27 124.4 107 57.0
TWI38G1858 Tripterygium wilfordii HOM05D003550 ORTHO05D004336 6.3e-27 124.4 118 56.8
Ah.10g030140 Amaranthus hybridus HOM05D003550 ORTHO05D004336 8.3e-27 124.0 104 56.7
arahy.Tifrunner.gnm1.ann1.VF4M4N Arachis hypogaea HOM05D003550 ORTHO05D004336 8.3e-27 124.0 132 47.0
C03p07080 Brassica napus HOM05D003550 ORTHO05D004336 1.1e-26 123.6 119 55.5
BolC3t13205H Brassica oleracea HOM05D003550 ORTHO05D004336 1.1e-26 123.6 119 55.5
Eucgr.G03219 Eucalyptus grandis HOM05D003550 ORTHO05D004336 1.4e-26 123.2 106 54.7
Glyma.13G195200 Glycine max HOM05D003550 ORTHO05D004336 1.4e-26 123.2 107 57.0
A03p06030 Brassica napus HOM05D003550 ORTHO05D004336 1.8e-26 122.9 126 52.4
BraA03t09941Z Brassica rapa HOM05D003550 ORTHO05D004336 1.8e-26 122.9 126 52.4
Lj9C657T7 Lonicera japonica HOM05D003550 ORTHO05D004336 2.4e-26 122.5 105 57.1
Lalb_Chr04g0264171 Lupinus albus HOM05D003550 ORTHO05D004336 4.1e-26 121.7 107 57.0
Aqoxy1G00373 Aquilegia oxysepala HOM05D003550 ORTHO05D004336 5.4e-26 121.3 111 53.2
CSS0018240 Camellia sinensis var. sinensis HOM05D003550 ORTHO05D004336 5.4e-26 121.3 107 57.0
CSS0021926 Camellia sinensis var. sinensis HOM05D003550 ORTHO05D004336 5.4e-26 121.3 107 57.0
arahy.Tifrunner.gnm1.ann1.LJ5CCV Arachis hypogaea HOM05D003550 ORTHO05D004336 7.0e-26 120.9 132 45.5
BcaB01g05352 Brassica carinata HOM05D003550 ORTHO05D004336 7.0e-26 120.9 126 52.4
Lalb_Chr01g0015821 Lupinus albus HOM05D003550 ORTHO05D004336 7.0e-26 120.9 107 57.0
AUR62026885 Chenopodium quinoa HOM05D003550 ORTHO05D004336 1.2e-25 120.2 110 56.4
Dinv32016 Davidia involucrata HOM05D003550 ORTHO05D004336 1.6e-25 119.8 105 57.1
AUR62032634 Chenopodium quinoa HOM05D003550 ORTHO05D004336 2.0e-25 119.4 110 56.4
Actinidia24461 Actinidia chinensis HOM05D003550 ORTHO05D004336 2.7e-25 119.0 129 49.6
PSO339G1124 Papaver somniferum HOM05D003550 ORTHO05D004336 2.7e-25 119.0 122 49.2
THA.LOC104819140 Tarenaya hassleriana HOM05D003550 ORTHO05D004336 2.7e-25 119.0 110 52.7
Zm00001eb350870 Zea mays HOM05D003550 ORTHO05D004336 2.7e-25 119.0 106 55.7
PSO384G0047 Papaver somniferum HOM05D003550 ORTHO05D004336 3.5e-25 118.6 122 49.2
Zm00001eb287260 Zea mays HOM05D003550 ORTHO05D004336 3.5e-25 118.6 106 54.7
ECA236G1978 Erigeron canadensis HOM05D003550 ORTHO05D004336 4.5e-25 118.2 111 55.0
MSTRG.28033 Avicennia marina HOM05D003550 ORTHO05D004336 5.9e-25 117.9 114 53.5
Sabra16G0169200 Salix brachista HOM05D003550 ORTHO05D004336 5.9e-25 117.9 108 52.8
Sabra16G0169400 Salix brachista HOM05D003550 ORTHO05D004336 5.9e-25 117.9 108 52.8
Actinidia06226 Actinidia chinensis HOM05D003550 ORTHO05D004336 1.0e-24 117.1 125 47.2
HanXRQChr04g0112901 Helianthus annuus HOM05D003550 ORTHO05D004336 1.3e-24 116.7 110 52.7
Cc00_g09560 Coffea canephora HOM05D003550 ORTHO05D004336 2.3e-24 115.9 111 53.2
Lsat_1_v5_gn_7_31581 Lactuca sativa HOM05D003550 ORTHO05D004336 2.3e-24 115.9 110 50.9
Haze_23247 Corylus avellana HOM05D003550 ORTHO05D004336 6.6e-24 114.4 119 46.2
Rhsim13G0208400 Rhododendron simsii HOM05D003550 ORTHO05D004336 6.6e-24 114.4 125 44.8
Oeu013090.1 Olea europaea HOM05D003550 ORTHO05D004336 8.6e-24 114.0 104 53.8
Actinidia10150 Actinidia chinensis HOM05D003550 ORTHO05D004336 1.1e-23 113.6 106 53.8
Medtr3g014090 Medicago truncatula HOM05D003550 ORTHO05D004336 1.1e-23 113.6 118 50.8
Sc10g0004490 Simmondsia chinensis HOM05D003550 ORTHO05D004336 1.1e-23 113.6 106 51.9
Rhsim07G0068000 Rhododendron simsii HOM05D003550 ORTHO05D004336 1.5e-23 113.2 111 52.3
CDE09G0620 Ceratophyllum demersum HOM05D003550 ORTHO05D004336 5.6e-23 111.3 105 51.4
Potri.001G274900 Populus trichocarpa HOM05D003550 ORTHO05D004336 5.6e-23 111.3 108 50.0
QL01p016949 Quercus lobata HOM05D003550 ORTHO05D004336 5.6e-23 111.3 103 52.4
Solyc01g096490.3 Solanum lycopersicum HOM05D003550 ORTHO05D004336 5.6e-23 111.3 111 51.4
Cfa009883 Carpinus fangiana HOM05D003550 ORTHO05D004336 7.3e-23 110.9 107 48.6
vmacro13761 Vaccinium macrocarpon HOM05D003550 ORTHO05D004336 1.6e-22 109.8 107 54.2
CDE02G1072 Ceratophyllum demersum HOM05D003550 ORTHO05D004336 2.8e-22 109.0 105 50.5
Sopen01g040220 Solanum pennellii HOM05D003550 ORTHO05D004336 2.8e-22 109.0 111 50.5
Peaxi162Scf00082g00122 Petunia axillaris HOM05D003550 ORTHO05D004336 4.7e-22 108.2 107 51.4
vmacro04042 Vaccinium macrocarpon HOM05D003550 ORTHO05D004336 4.7e-22 108.2 128 43.8
CAN.G1045.18 Capsicum annuum HOM05D003550 ORTHO05D004336 8.0e-22 107.5 111 49.5
Sed0009251 Sechium edule HOM05D003550 ORTHO05D004336 8.0e-22 107.5 103 54.4
MSTRG.5071 Avicennia marina HOM05D003550 ORTHO05D004336 1.0e-21 107.1 117 48.7
Nitab4.5_0005808g0030 Nicotiana tabacum HOM05D003550 ORTHO05D004336 1.0e-21 107.1 107 50.5
CsaV3_5G036850 Cucumis sativus L. HOM05D003550 ORTHO05D004336 1.4e-21 106.7 103 55.3
Nitab4.5_0003481g0090 Nicotiana tabacum HOM05D003550 ORTHO05D004336 1.4e-21 106.7 107 50.5
MELO3C012481.2 Cucumis melo HOM05D003550 ORTHO05D004336 1.8e-21 106.3 103 54.4
CsaV3_6G038940 Cucumis sativus L. HOM05D003550 ORTHO05D004336 1.8e-21 106.3 109 46.8
SGA_v2.0_scaffold232G43498 Striga asiatica HOM05D003550 ORTHO05D004336 1.8e-21 106.3 113 48.7
CSS0027876 Camellia sinensis var. sinensis HOM05D003550 ORTHO05D004336 2.3e-21 105.9 107 50.5
CiPaw.14G112000 Carya illinoinensis HOM05D003550 ORTHO05D004336 2.3e-21 105.9 118 44.1
SHI04010 Sapria himalayana HOM05D003550 ORTHO05D004336 3.0e-21 105.5 106 50.9
HanXRQChr15g0481011 Helianthus annuus HOM05D003550 ORTHO05D004336 5.2e-21 104.8 110 49.1
HPP92_003596 Vanilla planifolia HOM05D003550 ORTHO05D004336 6.8e-21 104.4 117 45.3
Sed0016122 Sechium edule HOM05D003550 ORTHO05D004336 2.6e-20 102.4 116 42.2
MELO3C014558.2 Cucumis melo HOM05D003550 ORTHO05D004336 1.3e-19 100.1 109 45.0
Mapoly0002s0111 Marchantia polymorpha HOM05D003550 ORTHO05D004336 1.8e-18 96.3 113 46.0
unitig_0.g2291 Utricularia gibba HOM05D003550 ORTHO05D004336 3.2e-18 95.5 106 47.2
Migut.N01852 Erythranthe guttata HOM05D003550 ORTHO05D004336 3.5e-17 92.0 108 44.4
SMO271G0120 Selaginella moellendorffii HOM05D003550 ORTHO05D004336 1.3e-16 90.1 113 43.4
SEGI_17265 Sequoiadendron giganteum HOM05D003550 ORTHO05D004336 2.3e-16 89.4 120 41.7
ATR0782G088 Amborella trichopoda HOM05D003550 ORTHO05D004336 8.6e-16 87.4 117 40.2
HPP92_001023 Vanilla planifolia HOM05D003550 ORTHO05D004336 1.1e-15 87.0 107 47.7
CBR_g16035 Chara braunii HOM05D003550 ORTHO05D004336 2.9e-11 72.4 130 36.2


User provided reference genes

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