Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3153 Fragaria x ananassa HOM05D013944 ORTHO05D013555 3.4e-89 331.6 169 100.0
FAN16G0690 Fragaria x ananassa HOM05D000234 ORTHO05D013555 7.5e-44 181.0 269 46.5
FAN12G1901 Fragaria x ananassa HOM05D013944 ORTHO05D208954 6.6e-24 114.8 122 55.7
FAN11G0196 Fragaria x ananassa HOM05D013944 ORTHO05D200058 5.2e-21 105.1 67 80.6
FAN12G0606 Fragaria x ananassa HOM05D013944 ORTHO05D013555 7.5e-20 101.3 54 90.7
FAN05G4168 Fragaria x ananassa HOM05D013944 ORTHO05D206683 2.2e-19 99.8 54 88.9
FAN09G2821 Fragaria x ananassa HOM05D013944 ORTHO05D203328 2.9e-19 99.4 65 75.4
FAN09G4506 Fragaria x ananassa HOM05D013944 ORTHO05D013555 3.7e-19 99.0 54 88.9
Lalb_Chr10g0105841 Lupinus albus HOM05D000278 ORTHO05D004794 8.3e-19 97.8 51 96.1
Peaxi162Scf00038g02039 Petunia axillaris HOM05D000278 ORTHO05D004794 8.3e-19 97.8 51 96.1
RcHm_v2.0_Chr2g0128841 Rosa chinensis HOM05D000278 ORTHO05D004794 8.3e-19 97.8 51 96.1
Sc03g0004270 Simmondsia chinensis HOM05D000278 ORTHO05D004794 8.3e-19 97.8 53 92.5
Atru.chr3.2917 Acer truncatum HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
AL3G23390 Arabidopsis lyrata HOM05D000278 ORTHO05D004794 1.1e-18 97.4 53 92.5
ClCG03G014240 Citrullus lanatus HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
MELO3C015615.2 Cucumis melo HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
CsaV3_1G041990 Cucumis sativus L. HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Duzib147G1120 Durio zibethinus HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Duzib187G1092 Durio zibethinus HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
FvH4_3g27240 Fragaria vesca HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
FAN11G3227 Fragaria x ananassa HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
FAN16G1090 Fragaria x ananassa HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
FAN16G3564 Fragaria x ananassa HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
FAN25G3467 Fragaria x ananassa HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Gohir.A12G001300 Gossypium hirsutum HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Gohir.D11G229500 Gossypium hirsutum HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Gohir.D12G001100 Gossypium hirsutum HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Gorai.003G068300 Gossypium raimondii HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Gorai.008G000400 Gossypium raimondii HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
LjContig00564g0022207 Lotus japonicus HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
MD03G1164100 Malus domestica HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Manes.11G109600 Manihot esculenta HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Peaxi162Scf00275g00008 Petunia axillaris HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Potri.004G195300 Populus trichocarpa HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Prupe.6G154400 Prunus persica HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
QL01p020501 Quercus lobata HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
RcHm_v2.0_Chr5g0049871 Rosa chinensis HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Sed0013756 Sechium edule HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Sed0019588 Sechium edule HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
Thecc.01G126500 Theobroma cacao HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
TWI31G0144 Tripterygium wilfordii HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
TWI75G0864 Tripterygium wilfordii HOM05D000278 ORTHO05D004794 1.1e-18 97.4 48 100.0
COL.COLO4_14011 Corchorus olitorius HOM05D000278 ORTHO05D004794 1.4e-18 97.1 48 97.9
FAN05G4066 Fragaria x ananassa HOM05D013944 ORTHO05D206295 1.4e-18 97.1 54 87.0
PSO541G3784 Papaver somniferum HOM05D000278 ORTHO05D004794 1.4e-18 97.1 48 97.9
PSO675G7679 Papaver somniferum HOM05D000278 ORTHO05D004794 1.4e-18 97.1 48 97.9
Rhsim05G0064500 Rhododendron simsii HOM05D000278 ORTHO05D004794 1.4e-18 97.1 52 92.3
SHI25343 Sapria himalayana HOM05D000278 ORTHO05D004794 1.4e-18 97.1 51 92.2
Aqoxy6G02051 Aquilegia oxysepala HOM05D000278 ORTHO05D004794 2.4e-18 96.3 51 92.2
AT3G11830 Arabidopsis thaliana HOM05D000278 ORTHO05D004794 2.4e-18 96.3 51 94.1
Haze_23638 Corylus avellana HOM05D000278 ORTHO05D004794 2.4e-18 96.3 48 97.9
Duzib264G0906 Durio zibethinus HOM05D000278 ORTHO05D004794 2.4e-18 96.3 48 97.9
Thhalv10020422m.g Eutrema salsugineum HOM05D000278 ORTHO05D004794 2.4e-18 96.3 51 94.1
FvH4_5g26590 Fragaria vesca HOM05D013944 ORTHO05D045583 2.4e-18 96.3 65 78.5
Gohir.A11G230300 Gossypium hirsutum HOM05D000278 ORTHO05D004794 2.4e-18 96.3 48 97.9
Lalb_Chr04g0249751 Lupinus albus HOM05D000278 ORTHO05D004794 2.4e-18 96.3 51 94.1
Potri.009G157400 Populus trichocarpa HOM05D000278 ORTHO05D004794 2.4e-18 96.3 48 97.9
Sabra09G0123000 Salix brachista HOM05D000278 ORTHO05D004794 2.4e-18 96.3 48 97.9
arahy.Tifrunner.gnm1.ann1.H62ZJF Arachis hypogaea HOM05D000278 ORTHO05D004794 3.2e-18 95.9 48 97.9
CiPaw.14G092200 Carya illinoinensis HOM05D000278 ORTHO05D004794 3.2e-18 95.9 48 97.9
Ciclev10014771m.g Citrus clementina HOM05D000278 ORTHO05D004794 3.2e-18 95.9 48 97.9
TAR625G0442 Trochodendron aralioides HOM05D000278 ORTHO05D004794 3.2e-18 95.9 48 97.9
CSS0003568 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
CSS0017916 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
Glyma.14G043400 Glycine max HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
Medtr5g087560 Medicago truncatula HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
Nitab4.5_0003976g0060 Nicotiana tabacum HOM05D000278 ORTHO05D004794 4.1e-18 95.5 51 94.1
Nitab4.5_0005873g0040 Nicotiana tabacum HOM05D000278 ORTHO05D004794 4.1e-18 95.5 51 94.1
Phvul.008G208800 Phaseolus vulgaris HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
Psat0s921g0240 Pisum sativum HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
THA.LOC104816967 Tarenaya hassleriana HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
THA.LOC104826479 Tarenaya hassleriana HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
TPR.G11653 Trifolium pratense HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
unitig_26.g9787 Utricularia gibba HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
VMungo0647G0629 Vigna mungo HOM05D000278 ORTHO05D004794 4.1e-18 95.5 48 97.9
Actinidia06356 Actinidia chinensis HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 97.9
Actinidia22468 Actinidia chinensis HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 97.9
Aa31LG3G5320 Aethionema arabicum HOM05D000278 ORTHO05D004794 5.4e-18 95.1 51 92.2
Aa31LG5G8530 Aethionema arabicum HOM05D000278 ORTHO05D004794 5.4e-18 95.1 49 93.9
EL10Ac4g08419 Beta vulgaris HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 93.8
Carub.0003s1118 Capsella rubella HOM05D000278 ORTHO05D004794 5.4e-18 95.1 51 92.2
AUR62013959 Chenopodium quinoa HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 93.8
AUR62019654 Chenopodium quinoa HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 93.8
Dinv32841 Davidia involucrata HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 97.9
Solyc06g065520.3 Solanum lycopersicum HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 97.9
Sopen06g024160 Solanum pennellii HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 97.9
PGSC0003DMG400026124 Solanum tuberosum HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 97.9
vmacro08485 Vaccinium macrocarpon HOM05D000278 ORTHO05D004794 5.4e-18 95.1 48 97.9
CANSAT35G1978 Cannabis sativa HOM05D000278 ORTHO05D004794 7.0e-18 94.7 48 95.8
DCAR_027486 Daucus carota HOM05D000278 ORTHO05D004794 7.0e-18 94.7 48 97.9
Eucgr.J00618 Eucalyptus grandis HOM05D000278 ORTHO05D004794 9.2e-18 94.4 48 95.8
Glyma.02G273200 Glycine max HOM05D000278 ORTHO05D004794 9.2e-18 94.4 48 95.8
PGR119G0569 Punica granatum HOM05D000278 ORTHO05D004794 9.2e-18 94.4 48 95.8
Hund02336 Selenicereus undatus HOM05D000278 ORTHO05D004794 9.2e-18 94.4 48 93.8
MBI08_g21308_MAGBIO Magnolia biondii HOM05D000278 ORTHO05D004794 1.2e-17 94.0 48 95.8
GSVIVG01002278001 Vitis vinifera HOM05D000278 ORTHO05D004794 1.2e-17 94.0 48 95.8
Ah.04g164010 Amaranthus hybridus HOM05D000278 ORTHO05D004794 1.6e-17 93.6 48 91.7
HanXRQChr12g0378161 Helianthus annuus HOM05D000278 ORTHO05D004794 1.6e-17 93.6 51 92.2
HanXRQChr15g0468701 Helianthus annuus HOM05D000278 ORTHO05D004794 1.6e-17 93.6 51 92.2
Hma1.2p1_1466F.1_g285420 Hydrangea macrophylla HOM05D000278 ORTHO05D004794 1.6e-17 93.6 50 90.0
Lj2A907T33 Lonicera japonica HOM05D000278 ORTHO05D004794 1.6e-17 93.6 48 95.8
SalBow8G4259 Salvia bowleyana HOM05D000278 ORTHO05D004794 1.6e-17 93.6 48 93.8
SalBow8G4293 Salvia bowleyana HOM05D000278 ORTHO05D004794 1.6e-17 93.6 48 93.8
Lsat_1_v5_gn_5_64940 Lactuca sativa HOM05D000278 ORTHO05D004794 2.1e-17 93.2 51 90.2
MSTRG.11745 Avicennia marina HOM05D000278 ORTHO05D004794 2.7e-17 92.8 48 93.8
Cpa.g.sc103.86 Carica papaya HOM05D000278 ORTHO05D004794 2.7e-17 92.8 48 93.8
Cc11_g01300 Coffea canephora HOM05D000278 ORTHO05D004794 2.7e-17 92.8 48 93.8
CDE02G3738 Ceratophyllum demersum HOM05D000278 ORTHO05D004794 4.6e-17 92.0 48 91.7
Migut.A00285 Erythranthe guttata HOM05D000278 ORTHO05D004794 4.6e-17 92.0 51 88.2
Mapoly0156s0015 Marchantia polymorpha HOM05D000278 ORTHO05D004794 4.6e-17 92.0 49 89.8
HPP92_007029 Vanilla planifolia HOM05D000278 ORTHO05D004794 4.6e-17 92.0 48 91.7
HPP92_007072 Vanilla planifolia HOM05D000278 ORTHO05D004794 4.6e-17 92.0 48 91.7
Zm00001eb207780 Zea mays HOM05D000278 ORTHO05D004794 4.6e-17 92.0 48 91.7
BolC3t16793H Brassica oleracea HOM05D000278 ORTHO05D004794 6.0e-17 91.7 51 90.2
Cre01.g026550 Chlamydomonas reinhardtii HOM05D000278 ORTHO05D004794 6.0e-17 91.7 48 91.7
Nn6g31931 Nelumbo nucifera HOM05D000278 ORTHO05D004794 6.0e-17 91.7 48 93.8
ATR0661G304 Amborella trichopoda HOM05D000278 ORTHO05D004794 7.8e-17 91.3 48 91.7
BcaB04g18663 Brassica carinata HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
BcaB04g21115 Brassica carinata HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
BcaB06g25572 Brassica carinata HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
BcaC01g04077 Brassica carinata HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
BcaC05g29321 Brassica carinata HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
BcaC09g48192 Brassica carinata HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
A03p37310 Brassica napus HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
A05p37520 Brassica napus HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
C03p45300 Brassica napus HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
C05p56080 Brassica napus HOM05D000278 ORTHO05D004794 7.8e-17 91.3 51 90.2
BolC1t05287H Brassica oleracea HOM05D000278 ORTHO05D004794 7.8e-17 91.3 49 91.8
BolC5t34275H Brassica oleracea HOM05D000278 ORTHO05D004794 7.8e-17 91.3 49 91.8
BraA05t22550Z Brassica rapa HOM05D000278 ORTHO05D004794 7.8e-17 91.3 49 91.8
DCAR_023796 Daucus carota HOM05D000278 ORTHO05D004794 7.8e-17 91.3 48 95.8
Migut.E01490 Erythranthe guttata HOM05D000278 ORTHO05D004794 1.0e-16 90.9 48 91.7
BraA03t12891Z Brassica rapa HOM05D000278 ORTHO05D004794 1.3e-16 90.5 51 88.2
BraA01t04158Z Brassica rapa HOM05D000278 ORTHO05D004794 1.7e-16 90.1 49 89.8
CARHR086380 Cardamine hirsuta HOM05D000278 ORTHO05D004794 1.7e-16 90.1 51 88.2
SGA_v2.0_scaffold169G38626 Striga asiatica HOM05D000278 ORTHO05D004794 1.7e-16 90.1 48 89.6
SGA_v2.0_scaffold4G02195 Striga asiatica HOM05D000278 ORTHO05D004794 1.7e-16 90.1 48 89.6
CDE06G0515 Ceratophyllum demersum HOM05D000278 ORTHO05D004794 2.3e-16 89.7 48 89.6
CBR_g42151 Chara braunii HOM05D000278 ORTHO05D004794 2.3e-16 89.7 48 85.4
ECA238G3358 Erigeron canadensis HOM05D000278 ORTHO05D004794 3.0e-16 89.4 51 88.2
Pp3c15_8230 Physcomitrium patens HOM05D000278 ORTHO05D004794 3.0e-16 89.4 48 87.5
Pp3c9_14010 Physcomitrium patens HOM05D000278 ORTHO05D004794 3.0e-16 89.4 48 87.5
SMO347G0357 Selaginella moellendorffii HOM05D000278 ORTHO05D004794 3.0e-16 89.4 48 89.6
AagrBONN_evm.TU.Sc2ySwM_117.2607 Anthoceros agrestis HOM05D000278 ORTHO05D004794 1.2e-14 84.0 46 87.0
MCO06G165 Micromonas commoda HOM05D000278 ORTHO05D004794 2.1e-14 83.2 47 80.9
PRCOL_00005497 Prasinoderma coloniale HOM05D000278 ORTHO05D004794 1.8e-13 80.1 46 80.4
ATR0099G017 Amborella trichopoda HOM05D000278 ORTHO05D004794 3.1e-13 79.3 47 83.0
Haze_26775 Corylus avellana HOM05D000278 ORTHO05D004794 3.2e-10 69.3 47 68.1
Glyma.01G130400 Glycine max HOM05D000278 ORTHO05D020208 2.7e-09 66.2 34 94.1
Glyma.04G129800 Glycine max HOM05D000278 ORTHO05D020208 1.0e-08 64.3 34 91.2
Cfa025880 Carpinus fangiana HOM05D000278 ORTHO05D004794 6.6e-08 61.6 46 60.9
Dinv32114 Davidia involucrata HOM05D000278 ORTHO05D004794 8.6e-08 61.2 32 90.6
FAN18G0973 Fragaria x ananassa HOM05D013944 ORTHO05D045583 2.8e-06 56.2 33 78.8


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