Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.7e-106 387.9 197 100.0
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.8e-102 375.9 197 98.0
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 9.2e-102 373.6 197 97.0
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 7.8e-101 370.5 197 95.9
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.3e-100 369.8 197 95.9
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 2.5e-75 285.8 193 78.8
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 7.9e-29 131.3 185 51.9
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 1.5e-27 127.1 189 50.8
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 8.2e-26 121.3 189 49.2
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 7.7e-24 114.8 183 44.8
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 8.5e-23 111.3 181 45.9
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.4e-20 104.0 177 44.6
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 2.8e-18 96.3 193 39.4
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 3.1e-17 92.8 93 61.3
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.2e-16 90.9 114 51.8
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 3.5e-16 89.4 94 55.3
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 7.7e-16 88.2 130 50.8
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 6.5e-15 85.1 160 39.4
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 1.5e-14 84.0 157 41.4
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 5.5e-14 82.0 140 45.0
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 9.4e-14 81.3 99 50.5
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 9.4e-14 81.3 111 49.5
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.7e-13 79.7 183 41.0
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 3.6e-13 79.3 72 63.9
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 3.6e-13 79.3 69 66.7
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 6.1e-13 78.6 103 46.6
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 8.0e-13 78.2 127 40.9
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 1.0e-12 77.8 132 44.7
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 1.8e-12 77.0 174 38.5
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.3e-12 76.6 103 43.7
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 3.0e-12 76.3 103 49.5
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 3.9e-12 75.9 78 60.3
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.2e-12 75.5 79 58.2
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 6.7e-12 75.1 103 42.7
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 6.7e-12 75.1 126 45.2
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 8.8e-12 74.7 130 45.4
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.1e-11 74.3 186 38.7
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-11 74.3 170 31.8
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.5e-11 73.9 103 51.5
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 2.0e-11 73.6 125 45.6
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 3.3e-11 72.8 92 53.3
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 4.4e-11 72.4 75 58.7
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 4.4e-11 72.4 117 40.2
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 4.4e-11 72.4 106 53.8
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 4.4e-11 72.4 106 53.8
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 4.4e-11 72.4 106 53.8
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 9.7e-11 71.2 93 44.1
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 1.3e-10 70.9 94 48.9
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.2e-10 70.1 78 57.7
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 2.2e-10 70.1 93 48.4
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 2.8e-10 69.7 69 62.3
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.2e-10 68.2 115 45.2
Medtr4g063885 Medicago truncatula HOM05D005967 ORTHO05D005174 8.2e-10 68.2 106 44.3
Psat7g217000 Pisum sativum HOM05D005967 ORTHO05D005174 8.2e-10 68.2 108 42.6
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 1.1e-09 67.8 95 49.5
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 3.1e-09 66.2 111 46.8
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 3.1e-09 66.2 120 45.8
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 9.1e-09 64.7 107 39.3
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.2e-08 64.3 107 43.9
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 2.6e-08 63.2 163 35.6
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 3.5e-08 62.8 127 39.4
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 5.9e-08 62.0 124 43.5
Rhsim01G0227100 Rhododendron simsii HOM05D005967 ORTHO05D005174 5.9e-08 62.0 122 38.5
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 7.7e-08 61.6 100 44.0
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 7.7e-08 61.6 95 46.3
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.0e-07 61.2 117 40.2
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-07 60.8 100 44.0
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 1.3e-07 60.8 104 42.3
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.7e-07 60.5 164 36.6
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.2e-07 60.1 136 43.4
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 3.8e-07 59.3 204 35.3
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 3.8e-07 59.3 128 41.4
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 5.0e-07 58.9 83 41.0
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 6.5e-07 58.5 70 48.6
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 8.5e-07 58.2 106 46.2
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-06 57.8 81 45.7
AUR62009584 Chenopodium quinoa HOM05D035467 ORTHO05D031022 1.5e-06 57.4 121 36.4
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 1.9e-06 57.0 121 39.7
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.5e-06 56.6 83 44.6
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 2.5e-06 56.6 76 48.7
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 3.2e-06 56.2 92 44.6
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 4.2e-06 55.8 82 48.8
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 4.2e-06 55.8 129 35.7
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 4.2e-06 55.8 81 38.3


User provided reference genes

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