Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3017 Fragaria x ananassa HOM05D000054 ORTHO05D005077 7.4e-50 200.3 105 100.0
FAN16G2687 Fragaria x ananassa HOM05D000054 ORTHO05D000171 9.7e-26 120.2 62 98.4
FAN25G2782 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.8e-25 118.6 62 96.8
FAN21G4054 Fragaria x ananassa HOM05D000054 ORTHO05D000171 8.2e-25 117.1 62 95.2
FAN16G2145 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.1e-24 116.7 62 96.8
FvH4_3g06860 Fragaria vesca HOM05D000054 ORTHO05D000171 7.7e-23 110.5 63 92.1
FAN11G3923 Fragaria x ananassa HOM05D000054 ORTHO05D000171 7.7e-23 110.5 63 92.1
FvH4_3g06900 Fragaria vesca HOM05D000054 ORTHO05D005077 1.7e-22 109.4 59 94.9
FvH4_3g06940 Fragaria vesca HOM05D000054 ORTHO05D000171 3.2e-21 105.1 62 87.1
FvH4_3g07041 Fragaria vesca HOM05D000054 ORTHO05D000171 4.2e-21 104.8 63 88.9
FvH4_3g06960 Fragaria vesca HOM05D000054 ORTHO05D000171 9.4e-21 103.6 63 87.3
FAN21G3268 Fragaria x ananassa HOM05D000054 ORTHO05D000171 9.4e-21 103.6 63 87.3
FAN21G0360 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.7e-20 102.1 62 87.1
FAN21G0760 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.7e-20 102.1 62 87.1
FAN21G1730 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.7e-20 102.1 62 87.1
FAN21G2154 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.7e-20 102.1 62 87.1
FAN21G2359 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.7e-20 102.1 63 87.3
FvH4_3g07010 Fragaria vesca HOM05D000054 ORTHO05D000171 8.8e-19 97.1 68 77.9
RcHm_v2.0_Chr5g0012221 Rosa chinensis HOM05D000054 ORTHO05D000171 1.2e-18 96.7 63 77.8
RcHm_v2.0_Chr5g0012241 Rosa chinensis HOM05D000054 ORTHO05D000171 1.3e-17 93.2 63 76.2
RcHm_v2.0_Chr5g0012251 Rosa chinensis HOM05D000054 ORTHO05D000171 3.7e-17 91.7 66 72.7
RcHm_v2.0_Chr5g0012201 Rosa chinensis HOM05D000054 ORTHO05D000171 6.3e-17 90.9 63 74.6
RcHm_v2.0_Chr1g0336311 Rosa chinensis HOM05D000054 ORTHO05D000171 8.3e-17 90.5 63 76.2
FvH4_3g07044 Fragaria vesca HOM05D000054 ORTHO05D000171 1.0e-14 83.6 63 69.8
FAN25G2159 Fragaria x ananassa HOM05D000054 ORTHO05D005077 9.5e-13 77.0 63 66.7
Haze_05422 Corylus avellana HOM05D000054 ORTHO05D002584 4.1e-08 61.6 62 58.1
FAN25G0613 Fragaria x ananassa HOM05D000054 ORTHO05D201008 4.1e-08 61.6 38 84.2
FvH4_3g20230 Fragaria vesca HOM05D000054 ORTHO05D000171 5.4e-08 61.2 61 55.7
RcHm_v2.0_Chr5g0034051 Rosa chinensis HOM05D000054 ORTHO05D000171 5.4e-08 61.2 61 55.7
RcHm_v2.0_Chr5g0012191 Rosa chinensis HOM05D000054 ORTHO05D005077 7.0e-08 60.8 63 55.6
Prupe.4G069400 Prunus persica HOM05D000054 ORTHO05D000171 9.2e-08 60.5 61 55.7
Prupe.4G069600 Prunus persica HOM05D000054 ORTHO05D000171 9.2e-08 60.5 61 57.4
Haze_05438 Corylus avellana HOM05D000054 ORTHO05D000171 1.2e-07 60.1 62 56.5
FAN25G0756 Fragaria x ananassa HOM05D000054 ORTHO05D000171 3.5e-07 58.5 71 49.3
MD10G1273200 Malus domestica HOM05D000054 ORTHO05D000171 3.5e-07 58.5 61 57.4
Haze_05440 Corylus avellana HOM05D000054 ORTHO05D000171 7.7e-07 57.4 61 52.5
Cfa001087 Carpinus fangiana HOM05D000054 ORTHO05D005077 1.3e-06 56.6 61 49.2
Haze_05417 Corylus avellana HOM05D000054 ORTHO05D000171 1.7e-06 56.2 72 45.8
FAN21G0001 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.7e-06 56.2 71 49.3
FvH4_3g06840 Fragaria vesca HOM05D000054 ORTHO05D000171 2.3e-06 55.8 71 47.9
Haze_05416 Corylus avellana HOM05D000054 ORTHO05D000171 2.9e-06 55.5 61 49.2
Haze_05420 Corylus avellana HOM05D000054 ORTHO05D005077 2.9e-06 55.5 61 47.5
Cfa001073 Carpinus fangiana HOM05D000054 ORTHO05D002584 5.0e-06 54.7 62 51.6
Prupe.4G069300 Prunus persica HOM05D000054 ORTHO05D000171 5.0e-06 54.7 62 54.8
MD00G1006500 Malus domestica HOM05D000054 ORTHO05D000171 6.6e-06 54.3 72 45.8
RcHm_v2.0_Chr5g0034091 Rosa chinensis HOM05D000054 ORTHO05D000171 6.6e-06 54.3 60 55.0
Cfa001078 Carpinus fangiana HOM05D000054 ORTHO05D005077 8.6e-06 53.9 62 53.2


User provided reference genes

Program Settings