Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2928 Fragaria x ananassa HOM05D008821 ORTHO05D010464 1.5e-83 312.8 157 100.0
FAN16G1747 Fragaria x ananassa HOM05D008821 ORTHO05D010464 2.6e-75 285.4 142 100.0
FvH4_3g05210 Fragaria vesca HOM05D008821 ORTHO05D010464 4.2e-73 278.1 142 97.9
FAN21G0539 Fragaria x ananassa HOM05D008821 ORTHO05D010464 1.3e-71 273.1 142 97.2
RcHm_v2.0_Chr5g0014511 Rosa chinensis HOM05D008821 ORTHO05D010464 5.1e-63 244.6 145 89.7
Prupe.4G083800 Prunus persica HOM05D008821 ORTHO05D010464 2.0e-35 152.9 165 58.2
CiPaw.09G121300 Carya illinoinensis HOM05D008821 ORTHO05D010464 4.1e-20 102.1 120 50.0
Lj4g0018254 Lotus japonicus HOM05D008821 ORTHO05D010464 3.8e-18 95.5 136 45.6
Gohir.D06G143700 Gossypium hirsutum HOM05D008821 ORTHO05D010464 8.6e-18 94.4 127 45.7
Nn4g26609 Nelumbo nucifera HOM05D008821 ORTHO05D010464 8.6e-18 94.4 144 44.4
Gorai.010G167500 Gossypium raimondii HOM05D008821 ORTHO05D010464 1.9e-17 93.2 127 45.7
Thecc.06G147000 Theobroma cacao HOM05D008821 ORTHO05D010464 3.3e-17 92.4 141 44.7
Lj5g0007792 Lotus japonicus HOM05D008821 ORTHO05D010464 7.2e-17 91.3 145 43.4
Aqoxy1G01677 Aquilegia oxysepala HOM05D008821 ORTHO05D010464 2.1e-16 89.7 144 42.4
Gohir.A06G139000 Gossypium hirsutum HOM05D008821 ORTHO05D010464 2.1e-16 89.7 127 44.1
TAR460G0006 Trochodendron aralioides HOM05D008821 ORTHO05D010464 8.0e-16 87.8 141 44.0
TPR.G9571 Trifolium pratense HOM05D008821 ORTHO05D010464 2.3e-15 86.3 141 45.4
Oeu007936.1 Olea europaea HOM05D008821 ORTHO05D010464 4.0e-15 85.5 145 43.4
Oeu007934.1 Olea europaea HOM05D008821 ORTHO05D010464 1.2e-14 84.0 146 43.2
Phvul.002G180600 Phaseolus vulgaris HOM05D008821 ORTHO05D010464 1.5e-14 83.6 141 44.0
MBI18_g11239_MAGBIO Magnolia biondii HOM05D008821 ORTHO05D010464 1.3e-13 80.5 156 37.8
Glyma.05G142600 Glycine max HOM05D008821 ORTHO05D010464 1.1e-12 77.4 145 42.8
Atru.chr10.1160 Acer truncatum HOM05D008821 ORTHO05D010464 1.4e-12 77.0 150 39.3
PSO541G6549 Papaver somniferum HOM05D008821 ORTHO05D010464 1.4e-12 77.0 125 45.6
Psat7g081560 Pisum sativum HOM05D008821 ORTHO05D010464 1.4e-12 77.0 128 43.8
ClCG01G024780 Citrullus lanatus HOM05D008821 ORTHO05D010464 4.1e-12 75.5 101 54.5
CsaV3_6G051900 Cucumis sativus L. HOM05D000116 ORTHO05D010464 5.4e-12 75.1 101 54.5
MELO3C007119.2 Cucumis melo HOM05D008821 ORTHO05D010464 9.2e-12 74.3 96 56.2
Manes.15G123932 Manihot esculenta HOM05D008821 ORTHO05D010464 9.2e-12 74.3 140 41.4
Dinv32224 Davidia involucrata HOM05D000116 ORTHO05D000133 1.2e-11 73.9 101 48.5
Glyma.08G098600 Glycine max HOM05D008821 ORTHO05D010464 1.2e-11 73.9 145 38.6
SGA_v2.0_scaffold40G15657 Striga asiatica HOM05D000624 ORTHO05D000495 1.3e-10 70.5 126 40.5
Haze_05636 Corylus avellana HOM05D008821 ORTHO05D010464 3.8e-10 68.9 79 50.6
Sc24g0001660 Simmondsia chinensis HOM05D008821 ORTHO05D010464 6.6e-10 68.2 122 37.7
Medtr5g077560 Medicago truncatula HOM05D008821 ORTHO05D010464 8.6e-10 67.8 136 39.7
Cfa000919 Carpinus fangiana HOM05D008821 ORTHO05D010464 7.3e-09 64.7 78 48.7
CSS0030437 Camellia sinensis var. sinensis HOM05D008821 ORTHO05D010464 1.0e-07 60.8 127 33.9
Sed0011418 Sechium edule HOM05D008821 ORTHO05D010464 2.3e-07 59.7 87 44.8
Lalb_Chr12g0196061 Lupinus albus HOM05D008821 ORTHO05D010464 3.0e-07 59.3 110 37.3
MBI02_g21430_MAGBIO Magnolia biondii HOM05D008821 ORTHO05D010464 6.8e-07 58.2 98 42.9
ATR1098G131 Amborella trichopoda HOM05D008821 ORTHO05D010464 1.2e-06 57.4 109 41.3
arahy.Tifrunner.gnm1.ann1.SDZ0GZ Arachis hypogaea HOM05D008821 ORTHO05D010464 4.4e-06 55.5 106 35.8
arahy.Tifrunner.gnm1.ann1.ZX7BQ2 Arachis hypogaea HOM05D000116 ORTHO05D010464 4.4e-06 55.5 114 34.2


User provided reference genes

Program Settings