Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2835 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.6e-76 289.3 140 100.0
FAN25G1230 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.3e-67 258.8 153 85.0
FAN06G4287 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-58 229.9 183 66.1
FAN03G0619 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.3e-57 226.5 183 66.1
FvH4_7g28000 Fragaria vesca HOM05D000051 ORTHO05D000015 3.7e-57 224.9 183 64.5
FAN01G1280 Fragaria x ananassa HOM05D000051 ORTHO05D017957 3.2e-48 195.3 178 60.7
FAN02G3071 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.6e-42 174.1 186 53.2
FAN05G4322 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.6e-42 174.1 186 53.2
FvH4_6g07500 Fragaria vesca HOM05D000051 ORTHO05D000015 3.8e-41 171.8 186 52.7
FAN14G2385 Fragaria x ananassa HOM05D000051 ORTHO05D000015 3.8e-41 171.8 186 52.7
FvH4_7g28030 Fragaria vesca HOM05D000918 ORTHO05D000015 1.2e-39 166.8 132 65.9
FAN06G4717 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-39 166.8 171 55.0
FAN03G3040 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.1e-35 153.7 176 50.6
FAN06G2306 Fragaria x ananassa HOM05D000051 ORTHO05D017957 4.0e-35 151.8 177 50.8
FvH4_7g28011 Fragaria vesca HOM05D000051 ORTHO05D000015 7.6e-34 147.5 177 48.6
FAN10G3157 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.9e-33 145.6 176 48.9
FAN09G0905 Fragaria x ananassa HOM05D007743 ORTHO05D000015 8.1e-28 127.5 158 48.1
FvH4_7g28040 Fragaria vesca HOM05D000051 ORTHO05D017957 4.2e-16 88.6 67 62.7
RcHm_v2.0_Chr5g0028411 Rosa chinensis HOM05D000051 ORTHO05D000015 3.0e-14 82.4 195 36.9
MD11G1275600 Malus domestica HOM05D000051 ORTHO05D000015 1.1e-13 80.5 179 36.9
FAN28G2657 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.9e-13 79.7 143 39.9
RcHm_v2.0_Chr5g0028461 Rosa chinensis HOM05D000051 ORTHO05D000015 1.3e-12 77.0 173 38.2
FAN11G0701 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.1e-12 76.3 130 41.5
RcHm_v2.0_Chr5g0028401 Rosa chinensis HOM05D000051 ORTHO05D000015 3.7e-12 75.5 170 37.6
MD03G1253700 Malus domestica HOM05D000051 ORTHO05D000015 4.8e-12 75.1 170 35.3
FvH4_5g35600 Fragaria vesca HOM05D000051 ORTHO05D000015 1.8e-11 73.2 133 40.6
FAN18G4561 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.8e-11 73.2 133 40.6
FvH4_3g17080 Fragaria vesca HOM05D000051 ORTHO05D000015 4.1e-11 72.0 155 37.4
FAN16G3673 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-10 70.5 176 34.7
FvH4_3g17060 Fragaria vesca HOM05D000051 ORTHO05D000015 1.5e-10 70.1 181 32.0
FvH4_3g33400 Fragaria vesca HOM05D000051 ORTHO05D000015 1.5e-10 70.1 176 34.1
RcHm_v2.0_Chr4g0417401 Rosa chinensis HOM05D000051 ORTHO05D000015 1.5e-10 70.1 173 32.9
FAN25G1937 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.6e-10 69.3 176 34.1
RcHm_v2.0_Chr5g0028451 Rosa chinensis HOM05D000051 ORTHO05D000015 2.6e-10 69.3 163 35.0
FvH4_3g33401 Fragaria vesca HOM05D012937 ORTHO05D000015 3.4e-10 68.9 130 37.7
RcHm_v2.0_Chr5g0028391 Rosa chinensis HOM05D000051 ORTHO05D000015 3.4e-10 68.9 181 30.9
RcHm_v2.0_Chr7g0237071 Rosa chinensis HOM05D000051 ORTHO05D000015 3.4e-10 68.9 176 34.1
FAN25G3744 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.0e-09 67.4 148 38.5
Prupe.4G160900 Prunus persica HOM05D000051 ORTHO05D000015 1.0e-09 67.4 182 28.6
FvH4_3g17061 Fragaria vesca HOM05D000051 ORTHO05D000015 1.3e-09 67.0 170 32.4
Prupe.4G158800 Prunus persica HOM05D000051 ORTHO05D000015 1.7e-09 66.6 191 29.3
RcHm_v2.0_Chr4g0417391 Rosa chinensis HOM05D000051 ORTHO05D000015 1.7e-09 66.6 179 31.3
FAN11G3894 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.2e-09 66.2 172 34.9
FAN25G3081 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.2e-09 66.2 180 32.2
MD11G1266700 Malus domestica HOM05D000051 ORTHO05D000015 2.2e-09 66.2 187 32.6
FAN05G2255 Fragaria x ananassa HOM05D000051 ORTHO05D000015 5.0e-09 65.1 131 38.9
FAN05G5209 Fragaria x ananassa HOM05D000051 ORTHO05D000015 5.0e-09 65.1 131 38.9
FAN25G2060 Fragaria x ananassa HOM05D000051 ORTHO05D000015 8.5e-09 64.3 193 31.1
FvH4_2g40800 Fragaria vesca HOM05D000051 ORTHO05D000015 1.1e-08 63.9 191 30.4
FvH4_3g21190 Fragaria vesca HOM05D000051 ORTHO05D000015 1.4e-08 63.5 172 34.3
RcHm_v2.0_Chr5g0059951 Rosa chinensis HOM05D000051 ORTHO05D000015 1.4e-08 63.5 174 34.5
MD03G1253500 Malus domestica HOM05D000051 ORTHO05D000015 1.9e-08 63.2 183 31.1
MD03G1276400 Malus domestica HOM05D000051 ORTHO05D000015 1.9e-08 63.2 191 28.8
Prupe.4G151700 Prunus persica HOM05D000051 ORTHO05D000015 1.9e-08 63.2 169 32.0
FAN19G2798 Fragaria x ananassa HOM05D000051 ORTHO05D010714 2.5e-08 62.8 185 30.8
MD03G1255400 Malus domestica HOM05D000051 ORTHO05D000015 2.5e-08 62.8 169 33.1
Prupe.4G158900 Prunus persica HOM05D000051 ORTHO05D000015 3.2e-08 62.4 189 29.6
RcHm_v2.0_Chr5g0028201 Rosa chinensis HOM05D000051 ORTHO05D000015 4.2e-08 62.0 174 33.3
RcHm_v2.0_Chr5g0028431 Rosa chinensis HOM05D000051 ORTHO05D000015 4.2e-08 62.0 70 54.3
FvH4_1g09890 Fragaria vesca HOM05D000051 ORTHO05D000015 5.5e-08 61.6 184 29.3
MD11G1267000 Malus domestica HOM05D000051 ORTHO05D000015 7.2e-08 61.2 185 32.4
FAN17G0415 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-07 60.5 165 30.9
FAN17G2114 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-07 60.5 174 29.3
RcHm_v2.0_Chr5g0040081 Rosa chinensis HOM05D000051 ORTHO05D000015 1.2e-07 60.5 176 33.5
FAN08G2405 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.6e-07 60.1 175 32.0
FAN13G0806 Fragaria x ananassa HOM05D012937 ORTHO05D000015 1.6e-07 60.1 131 35.1
FAN23G0111 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.6e-07 60.1 191 29.8
RcHm_v2.0_Chr4g0417361 Rosa chinensis HOM05D000051 ORTHO05D022692 1.6e-07 60.1 173 31.2
RcHm_v2.0_Chr5g0028551 Rosa chinensis HOM05D000051 ORTHO05D000015 1.6e-07 60.1 194 29.9
RcHm_v2.0_Chr4g0417411 Rosa chinensis HOM05D000051 ORTHO05D000015 2.1e-07 59.7 172 30.8
RcHm_v2.0_Chr5g0028241 Rosa chinensis HOM05D000051 ORTHO05D000015 2.1e-07 59.7 160 32.5
RcHm_v2.0_Chr6g0304711 Rosa chinensis HOM05D000051 ORTHO05D000015 2.1e-07 59.7 170 34.7
MD03G1253200 Malus domestica HOM05D000051 ORTHO05D000015 2.7e-07 59.3 180 30.0
MD11G1265100 Malus domestica HOM05D000051 ORTHO05D000015 2.7e-07 59.3 188 31.9
MD11G1266000 Malus domestica HOM05D000051 ORTHO05D000015 3.6e-07 58.9 195 30.3
MD11G1275400 Malus domestica HOM05D000051 ORTHO05D000015 3.6e-07 58.9 129 35.7
Prupe.4G161200 Prunus persica HOM05D000051 ORTHO05D000015 3.6e-07 58.9 185 29.7
RcHm_v2.0_Chr1g0363171 Rosa chinensis HOM05D000051 ORTHO05D000015 3.6e-07 58.9 96 39.6
RcHm_v2.0_Chr5g0028521 Rosa chinensis HOM05D000051 ORTHO05D000015 3.6e-07 58.9 197 29.9
MD11G1274900 Malus domestica HOM05D000051 ORTHO05D000015 4.6e-07 58.5 184 32.6
RcHm_v2.0_Chr2g0115721 Rosa chinensis HOM05D000051 ORTHO05D000015 4.6e-07 58.5 173 33.5
MD03G1253800 Malus domestica HOM05D000051 ORTHO05D000015 6.1e-07 58.2 54 57.4
FAN10G1889 Fragaria x ananassa HOM05D000051 ORTHO05D000015 7.9e-07 57.8 46 67.4
MD11G1265000 Malus domestica HOM05D000051 ORTHO05D000015 1.0e-06 57.4 188 29.3
FvH4_3g17062 Fragaria vesca HOM05D000051 ORTHO05D000015 1.3e-06 57.0 85 47.1
FvH4_3g18021 Fragaria vesca HOM05D000051 ORTHO05D000015 1.3e-06 57.0 33 72.7
FAN11G1423 Fragaria x ananassa HOM05D000051 ORTHO05D008292 1.3e-06 57.0 33 72.7
FvH4_1g01470 Fragaria vesca HOM05D000051 ORTHO05D000015 1.8e-06 56.6 182 31.9
FAN02G0303 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.3e-06 56.2 161 33.5
FAN13G1655 Fragaria x ananassa HOM05D012937 ORTHO05D000015 2.3e-06 56.2 75 45.3
RcHm_v2.0_Chr5g0029291 Rosa chinensis HOM05D000051 ORTHO05D000015 2.3e-06 56.2 184 29.9
FAN10G1038 Fragaria x ananassa HOM05D000091 ORTHO05D000015 3.0e-06 55.8 103 37.9
FAN28G0582 Fragaria x ananassa HOM05D012937 ORTHO05D000015 5.1e-06 55.1 141 34.0
FvH4_3g17160 Fragaria vesca HOM05D000051 ORTHO05D000015 6.7e-06 54.7 196 28.6
MD03G1246000 Malus domestica HOM05D000051 ORTHO05D000015 6.7e-06 54.7 184 29.9
RcHm_v2.0_Chr5g0028511 Rosa chinensis HOM05D000051 ORTHO05D000015 6.7e-06 54.7 200 30.0


User provided reference genes

Program Settings