Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2809 Fragaria x ananassa HOM05D007116 ORTHO05D008255 2.0e-109 399.1 198 100.0
FAN25G2160 Fragaria x ananassa HOM05D007116 ORTHO05D008255 9.6e-75 283.9 198 76.8
FvH4_3g33160 Fragaria vesca HOM05D007116 ORTHO05D008255 1.8e-68 263.1 198 73.2
FAN11G3109 Fragaria x ananassa HOM05D007116 ORTHO05D008255 4.0e-65 251.9 207 70.0
RcHm_v2.0_Chr5g0060481 Rosa chinensis HOM05D007116 ORTHO05D008255 4.9e-63 245.0 202 67.8
Prupe.6G095100 Prunus persica HOM05D007116 ORTHO05D008255 1.0e-55 220.7 202 61.9
Cfa011360 Carpinus fangiana HOM05D007116 ORTHO05D008255 1.8e-52 209.9 195 59.0
MD11G1130500 Malus domestica HOM05D007116 ORTHO05D008255 5.1e-52 208.4 189 59.8
CiPaw.14G078100 Carya illinoinensis HOM05D007116 ORTHO05D008255 8.7e-52 207.6 193 59.1
MD03G1105000 Malus domestica HOM05D007116 ORTHO05D008255 1.1e-51 207.2 201 57.2
Dinv31164 Davidia involucrata HOM05D007116 ORTHO05D008255 1.9e-51 206.5 200 57.0
Thecc.09G259900 Theobroma cacao HOM05D007116 ORTHO05D008255 1.3e-50 203.8 199 55.3
CANSAT54G1028 Cannabis sativa HOM05D007116 ORTHO05D008255 2.8e-50 202.6 189 58.7
Ciclev10029486m.g Citrus clementina HOM05D007116 ORTHO05D008255 6.3e-50 201.4 191 57.1
CSS0011684 Camellia sinensis var. sinensis HOM05D007116 ORTHO05D008255 8.2e-50 201.1 198 55.1
FAN21G4030 Fragaria x ananassa HOM05D001788 ORTHO05D003523 8.2e-50 201.1 161 66.5
TAR633G2203 Trochodendron aralioides HOM05D007116 ORTHO05D008255 8.2e-50 201.1 192 57.8
Duzib168G0016 Durio zibethinus HOM05D007116 ORTHO05D008255 1.1e-49 200.7 198 54.5
ClCG02G020980 Citrullus lanatus HOM05D007116 ORTHO05D008255 1.8e-49 199.9 190 58.9
QL01p037299 Quercus lobata HOM05D007116 ORTHO05D008255 1.8e-49 199.9 190 56.3
Gohir.D07G120900 Gossypium hirsutum HOM05D007116 ORTHO05D008255 2.4e-49 199.5 198 55.1
Gorai.001G130300 Gossypium raimondii HOM05D007116 ORTHO05D008255 3.1e-49 199.1 198 55.1
Manes.11G141700 Manihot esculenta HOM05D007116 ORTHO05D008255 3.1e-49 199.1 189 56.6
Nn2g10686 Nelumbo nucifera HOM05D007116 ORTHO05D008255 3.1e-49 199.1 180 59.4
Gohir.A07G116500 Gossypium hirsutum HOM05D007116 ORTHO05D008255 4.1e-49 198.7 198 53.5
Cpa.g.sc139.73 Carica papaya HOM05D007116 ORTHO05D008255 5.3e-49 198.4 191 56.0
vmacro14456 Vaccinium macrocarpon HOM05D007116 ORTHO05D008255 2.6e-48 196.1 201 55.2
CSS0026412 Camellia sinensis var. sinensis HOM05D007116 ORTHO05D008255 5.9e-48 194.9 182 57.7
CSS0034839 Camellia sinensis var. sinensis HOM05D007116 ORTHO05D008255 5.9e-48 194.9 182 57.7
AUR62006524 Chenopodium quinoa HOM05D007116 ORTHO05D008255 5.9e-48 194.9 197 56.3
Psat5g277520 Pisum sativum HOM05D007116 ORTHO05D008255 7.7e-48 194.5 184 56.0
MELO3C025752.2 Cucumis melo HOM05D007116 ORTHO05D008255 1.3e-47 193.7 191 56.5
Hma1.2p1_0071F.1_g038060 Hydrangea macrophylla HOM05D007116 ORTHO05D008255 1.3e-47 193.7 193 54.4
Lalb_Chr14g0374781 Lupinus albus HOM05D007116 ORTHO05D008255 1.7e-47 193.4 190 53.7
Potri.009G004500 Populus trichocarpa HOM05D007116 ORTHO05D008255 1.7e-47 193.4 189 56.6
Lj3g0013477 Lotus japonicus HOM05D007116 ORTHO05D008255 2.2e-47 193.0 177 56.5
Nitab4.5_0001802g0040 Nicotiana tabacum HOM05D007116 ORTHO05D008255 2.2e-47 193.0 202 53.0
Ah.01g002760 Amaranthus hybridus HOM05D007116 ORTHO05D008255 2.9e-47 192.6 188 55.3
PSO339G1106 Papaver somniferum HOM05D007116 ORTHO05D008255 3.8e-47 192.2 190 54.7
PSO384G0060 Papaver somniferum HOM05D007116 ORTHO05D008255 3.8e-47 192.2 185 55.7
GSVIVG01025140001 Vitis vinifera HOM05D007116 ORTHO05D008255 5.0e-47 191.8 203 54.2
Eucgr.J00949 Eucalyptus grandis HOM05D007116 ORTHO05D008255 1.4e-46 190.3 194 53.1
Sabra09G0002000 Salix brachista HOM05D007116 ORTHO05D008255 1.4e-46 190.3 189 56.1
Medtr2g093680 Medicago truncatula HOM05D007116 ORTHO05D008255 2.5e-46 189.5 185 54.1
Glyma.15G045500 Glycine max HOM05D007116 ORTHO05D008255 4.2e-46 188.7 198 53.5
Rhsim01G0219200 Rhododendron simsii HOM05D007116 ORTHO05D008255 5.5e-46 188.3 201 52.7
Sed0028029 Sechium edule HOM05D007116 ORTHO05D008255 7.2e-46 188.0 192 56.2
MSTRG.21142 Avicennia marina HOM05D007116 ORTHO05D008255 9.4e-46 187.6 198 53.0
Lalb_Chr24g0394461 Lupinus albus HOM05D007116 ORTHO05D008255 9.4e-46 187.6 200 52.0
Sc06g0010500 Simmondsia chinensis HOM05D007116 ORTHO05D008255 1.2e-45 187.2 191 53.9
Lsat_1_v5_gn_2_97820 Lactuca sativa HOM05D007116 ORTHO05D008255 2.1e-45 186.4 198 53.0
Oeu059103.2 Olea europaea HOM05D007116 ORTHO05D008255 2.7e-45 186.0 192 53.6
Glyma.13G328300 Glycine max HOM05D007116 ORTHO05D008255 3.6e-45 185.7 191 54.5
Atru.chr3.3688 Acer truncatum HOM05D007116 ORTHO05D008255 4.6e-45 185.3 196 53.6
Thhalv10009030m.g Eutrema salsugineum HOM05D007116 ORTHO05D008255 7.9e-45 184.5 189 54.5
Phvul.005G137100 Phaseolus vulgaris HOM05D007116 ORTHO05D008255 7.9e-45 184.5 177 55.4
Aqoxy2G01812 Aquilegia oxysepala HOM05D007116 ORTHO05D008255 1.0e-44 184.1 199 51.3
arahy.Tifrunner.gnm1.ann1.BKN2Z7 Arachis hypogaea HOM05D007116 ORTHO05D008255 1.4e-44 183.7 192 51.0
DCAR_006049 Daucus carota HOM05D007116 ORTHO05D008255 1.4e-44 183.7 198 49.0
Sopen11g028590 Solanum pennellii HOM05D007116 ORTHO05D008255 1.4e-44 183.7 191 51.8
Aa31sc281G20 Aethionema arabicum HOM05D007116 ORTHO05D008255 1.8e-44 183.3 195 52.3
EL10Ac9g22473 Beta vulgaris HOM05D007116 ORTHO05D008255 1.8e-44 183.3 196 53.1
Haze_23906 Corylus avellana HOM05D007116 ORTHO05D008255 1.8e-44 183.3 122 73.8
BraA06t23710Z Brassica rapa HOM05D007116 ORTHO05D008255 3.0e-44 182.6 196 53.1
THA.LOC104826359 Tarenaya hassleriana HOM05D007116 ORTHO05D008255 3.0e-44 182.6 196 53.1
Actinidia03745 Actinidia chinensis HOM05D007116 ORTHO05D008255 6.7e-44 181.4 175 53.7
CAN.G309.11 Capsicum annuum HOM05D007116 ORTHO05D008255 6.7e-44 181.4 193 51.3
BcaC05g24710 Brassica carinata HOM05D007116 ORTHO05D008255 8.8e-44 181.0 195 51.3
A06p05040 Brassica napus HOM05D007116 ORTHO05D008255 8.8e-44 181.0 196 52.6
VMungo1080G0278 Vigna mungo HOM05D007116 ORTHO05D008255 8.8e-44 181.0 185 52.4
BcaB02g06700 Brassica carinata HOM05D007116 ORTHO05D008255 1.1e-43 180.6 196 52.6
BcaC05g24713 Brassica carinata HOM05D007116 ORTHO05D008255 1.1e-43 180.6 196 52.6
BolC5t29359H Brassica oleracea HOM05D007116 ORTHO05D008255 1.1e-43 180.6 195 51.3
CARHR007740 Cardamine hirsuta HOM05D007116 ORTHO05D008255 1.1e-43 180.6 196 50.5
arahy.Tifrunner.gnm1.ann1.W744GL Arachis hypogaea HOM05D007116 ORTHO05D008255 2.5e-43 179.5 192 50.0
C05p05980 Brassica napus HOM05D007116 ORTHO05D008255 3.3e-43 179.1 196 52.0
Cc01_g11490 Coffea canephora HOM05D007116 ORTHO05D008255 3.3e-43 179.1 184 51.1
Dinv32784 Davidia involucrata HOM05D007116 ORTHO05D008255 3.3e-43 179.1 120 74.2
HPP92_003246 Vanilla planifolia HOM05D007116 ORTHO05D008255 5.7e-43 178.3 198 48.0
AT1G07960 Arabidopsis thaliana HOM05D007116 ORTHO05D008255 9.7e-43 177.6 197 51.8
TWI31G0539 Tripterygium wilfordii HOM05D007116 ORTHO05D008255 1.3e-42 177.2 191 51.8
Carub.0001s0731 Capsella rubella HOM05D007116 ORTHO05D008255 1.7e-42 176.8 197 51.3
Zm00001eb013190 Zea mays HOM05D007116 ORTHO05D008255 3.7e-42 175.6 186 50.5
AL1G18290 Arabidopsis lyrata HOM05D007116 ORTHO05D008255 4.8e-42 175.3 197 49.7
MBI05_g31455_MAGBIO Magnolia biondii HOM05D007116 ORTHO05D008255 6.3e-42 174.9 174 54.0
Os03g0287900 Oryza sativa ssp. japonica HOM05D007116 ORTHO05D008255 5.3e-41 171.8 182 51.1
SalBow3G4480 Salvia bowleyana HOM05D007116 ORTHO05D008255 6.9e-41 171.4 193 50.3
Migut.D02186 Erythranthe guttata HOM05D007116 ORTHO05D008255 9.1e-41 171.0 202 49.0
Nitab4.5_0002129g0050 Nicotiana tabacum HOM05D007116 ORTHO05D008255 2.0e-40 169.9 190 50.5
unitig_46.g18230 Utricularia gibba HOM05D007116 ORTHO05D008255 2.0e-40 169.9 121 69.4
ATR1159G039 Amborella trichopoda HOM05D007116 ORTHO05D008255 7.7e-40 167.9 193 47.2
Solyc11g069690.3 Solanum lycopersicum HOM05D007116 ORTHO05D008255 1.7e-39 166.8 115 69.6
HanXRQChr07g0197431 Helianthus annuus HOM05D007116 ORTHO05D008255 3.8e-39 165.6 126 67.5
TWI79G1024 Tripterygium wilfordii HOM05D007116 ORTHO05D008255 3.8e-39 165.6 192 50.0
SGA_v2.0_scaffold61G21169 Striga asiatica HOM05D007116 ORTHO05D008255 1.1e-38 164.1 123 66.7
ECA238G1748 Erigeron canadensis HOM05D000001 ORTHO05D000003 1.9e-38 163.3 166 51.2
SEGI_21083 Sequoiadendron giganteum HOM05D007116 ORTHO05D008255 4.2e-38 162.2 108 68.5
Ca_01432_v3 Cicer arietinum L. HOM05D001788 ORTHO05D003523 5.7e-35 151.8 88 76.1
Hund08379 Selenicereus undatus HOM05D007116 ORTHO05D008255 9.7e-35 151.0 87 77.0
CDE02G2612 Ceratophyllum demersum HOM05D007116 ORTHO05D008255 6.5e-31 138.3 88 65.9
Ah.01g015030 Amaranthus hybridus HOM05D007116 ORTHO05D008255 8.5e-31 137.9 178 44.9
CDE09G0756 Ceratophyllum demersum HOM05D007116 ORTHO05D008255 8.5e-31 137.9 150 46.0
PGSC0003DMG400019678 Solanum tuberosum HOM05D007116 ORTHO05D008255 3.0e-28 129.4 236 37.7
Mapoly0090s0032 Marchantia polymorpha HOM05D007116 ORTHO05D008255 5.2e-28 128.6 111 55.9
Hma1.2p1_0071F.1_g038070 Hydrangea macrophylla HOM05D007116 ORTHO05D008255 3.3e-27 125.9 138 47.8
AagrBONN_evm.TU.Sc2ySwM_344.3330 Anthoceros agrestis HOM05D007116 ORTHO05D008255 9.7e-27 124.4 125 51.2
Actinidia07116 Actinidia chinensis HOM05D001788 ORTHO05D003523 4.1e-25 119.0 77 72.7
Pp3c6_3120 Physcomitrium patens HOM05D007116 ORTHO05D008255 2.7e-24 116.3 121 48.8
SMO145G0025 Selaginella moellendorffii HOM05D007116 ORTHO05D008255 2.7e-24 116.3 120 45.8
Peaxi162Scf00389g00918 Petunia axillaris HOM05D007116 ORTHO05D008255 1.7e-23 113.6 67 76.1
COL.COLO4_24546 Corchorus olitorius HOM05D004740 ORTHO05D008255 7.2e-22 108.2 86 61.6
SHI06054 Sapria himalayana HOM05D007116 ORTHO05D008255 1.6e-21 107.1 78 64.1
Ah.04g158080 Amaranthus hybridus HOM05D007116 ORTHO05D008255 6.5e-15 85.1 57 66.7
CBR_g16056 Chara braunii HOM05D007116 ORTHO05D008255 6.5e-15 85.1 120 37.5
CBR_g3892 Chara braunii HOM05D000172 ORTHO05D008255 1.5e-14 84.0 162 28.4
CBR_g16054 Chara braunii HOM05D002981 ORTHO05D008255 5.5e-14 82.0 120 35.8
PRCOL_00005748 Prasinoderma coloniale HOM05D002981 ORTHO05D008255 4.0e-12 75.9 119 36.1
Cre16.g692751 Chlamydomonas reinhardtii HOM05D002981 ORTHO05D008255 4.9e-10 68.9 122 27.9
Lsat_1_v5_gn_7_73501 Lactuca sativa HOM05D002981 ORTHO05D003725 6.3e-10 68.6 116 37.1
ECA236G5052 Erigeron canadensis HOM05D002981 ORTHO05D003725 8.3e-10 68.2 128 32.0
Cfa022208 Carpinus fangiana HOM05D000172 ORTHO05D122391 4.5e-08 62.4 98 33.7
Mapoly0016s0144 Marchantia polymorpha HOM05D002981 ORTHO05D003725 7.7e-08 61.6 127 29.9
Potri.002G198300 Populus trichocarpa HOM05D002981 ORTHO05D003725 1.7e-07 60.5 102 29.4
Medtr7g112040 Medicago truncatula HOM05D002981 ORTHO05D003725 5.0e-07 58.9 88 33.0
TAR365G0113 Trochodendron aralioides HOM05D002981 ORTHO05D003725 6.6e-07 58.5 90 31.1
arahy.Tifrunner.gnm1.ann1.MGF3V6 Arachis hypogaea HOM05D007116 ORTHO05D008255 8.6e-07 58.2 141 31.2
Atru.chr5.1047 Acer truncatum HOM05D002981 ORTHO05D003725 1.5e-06 57.4 90 31.1
DCAR_029360 Daucus carota HOM05D002981 ORTHO05D003725 1.5e-06 57.4 107 27.1
DCAR_019739 Daucus carota HOM05D000172 ORTHO05D004529 5.6e-06 55.5 92 29.3


User provided reference genes

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