Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 0.0e+00 1289.2 634 100.0
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 0.0e+00 1198.3 665 90.7
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 0.0e+00 1137.1 665 87.4
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 0.0e+00 1081.2 665 82.1
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.5e-193 680.2 440 81.4
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 6.2e-192 674.9 662 57.1
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 9.9e-190 667.5 689 55.7
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 6.4e-189 664.8 676 56.5
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 8.7e-178 627.9 700 52.6
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.9e-173 612.8 684 52.8
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 3.2e-172 609.4 726 50.7
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 9.3e-172 607.8 671 53.2
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 9.3e-172 607.8 734 48.5
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 3.0e-170 602.8 670 52.4
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 3.1e-167 592.8 706 50.0
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 1.9e-164 583.6 689 50.9
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 1.2e-163 580.9 556 57.2
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 1.5e-161 573.9 543 57.3
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 9.6e-161 571.2 681 49.8
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 1.3e-160 570.9 683 50.1
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 8.2e-160 568.2 734 46.5
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 2.4e-159 566.6 716 49.7
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.6e-158 563.1 651 50.4
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 2.2e-157 560.1 693 50.2
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 1.4e-156 557.4 582 52.9
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 9.3e-156 554.7 667 50.7
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 6.1e-155 552.0 644 49.4
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 3.9e-154 549.3 595 53.8
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 6.7e-154 548.5 679 49.3
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 4.3e-153 545.8 635 51.2
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 9.7e-153 544.7 679 49.5
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 2.2e-152 543.5 725 48.7
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 3.1e-151 539.7 492 58.1
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 4.1e-151 539.3 642 50.0
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 2.0e-150 537.0 440 61.8
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 2.0e-150 537.0 453 59.8
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.3e-149 534.3 690 48.3
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.7e-149 533.9 659 48.6
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 3.8e-149 532.7 622 50.0
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 8.5e-149 531.6 632 50.3
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 3.2e-148 529.6 563 51.0
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 5.5e-148 528.9 512 54.5
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 7.2e-148 528.5 547 51.6
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 1.2e-147 527.7 669 48.3
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 2.1e-147 526.9 641 49.8
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 1.0e-146 524.6 619 48.9
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 1.8e-146 523.9 506 55.7
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 3.0e-146 523.1 491 55.8
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 5.1e-146 522.3 491 55.6
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 9.7e-145 518.1 547 52.7
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 2.2e-144 516.9 503 54.9
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 2.8e-144 516.5 484 56.2
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 8.2e-144 515.0 505 54.3
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 3.1e-143 513.1 691 45.0
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 4.1e-143 512.7 567 51.7
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 1.5e-142 510.8 610 49.5
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 2.0e-142 510.4 491 55.2
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 3.8e-141 506.1 535 52.1
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 6.1e-139 498.8 677 45.8
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 2.3e-138 496.9 665 45.7
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 6.7e-138 495.4 573 48.9
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 3.3e-137 493.0 667 45.3
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 2.4e-135 486.9 670 45.8
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 3.8e-133 479.6 430 56.7
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 7.2e-132 475.3 468 53.8
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 3.3e-129 466.5 594 48.8
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 3.1e-127 459.9 424 55.7
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 3.0e-122 443.4 599 46.9
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 2.1e-107 394.0 390 53.1
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 7.0e-103 379.0 389 48.8
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 7.0e-103 379.0 496 45.4
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 1.2e-97 361.7 263 67.3
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.8e-91 340.5 499 44.5
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 1.9e-84 317.8 393 48.6
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 2.4e-79 300.8 498 43.8
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.2e-73 282.0 282 53.5
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 8.1e-67 259.2 290 50.7
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 9.9e-65 252.3 133 88.0
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 1.2e-62 245.4 280 48.2
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 4.9e-56 223.4 187 58.8
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.1e-55 222.2 400 42.0
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 5.1e-29 133.7 495 29.3
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 3.7e-27 127.5 133 51.9
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 2.4e-26 124.8 78 69.2
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 5.1e-21 107.1 153 45.1
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 1.2e-14 85.9 83 53.0
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 3.7e-11 74.3 152 36.2
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 8.2e-11 73.2 145 35.2
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 3.1e-10 71.2 192 29.7
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 2.7e-09 68.2 155 32.3
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 1.5e-07 62.4 321 30.2
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 7.2e-07 60.1 93 41.9
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 1.6e-06 58.9 53 54.7


User provided reference genes

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