Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.5e-288 993.4 522 100.0
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.0e-269 932.9 553 90.8
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 5.2e-261 904.0 529 91.5
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 5.0e-248 860.9 529 86.0
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 3.3e-247 858.2 504 90.9
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 9.9e-220 766.9 535 76.1
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 9.9e-212 740.3 538 73.4
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 8.1e-198 694.1 542 69.6
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.1e-191 673.7 519 69.4
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 4.3e-191 671.8 507 70.0
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 5.6e-191 671.4 541 68.9
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 1.6e-190 669.8 548 66.8
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.8e-189 666.4 547 67.1
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 4.0e-189 665.2 547 66.7
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.2e-188 663.7 548 66.6
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 7.6e-188 661.0 556 66.2
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 1.3e-187 660.2 537 65.7
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 8.4e-187 657.5 555 65.2
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 3.2e-186 655.6 509 67.8
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 4.2e-186 655.2 527 66.6
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 5.5e-186 654.8 487 70.2
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 1.8e-184 649.8 514 66.9
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 1.8e-184 649.8 551 64.6
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 5.1e-184 648.3 533 65.9
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 2.5e-183 646.0 544 66.0
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 3.3e-183 645.6 476 71.0
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 4.3e-183 645.2 546 64.5
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 7.4e-183 644.4 491 68.2
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.3e-182 643.7 491 68.2
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 1.6e-182 643.3 496 68.3
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 2.1e-182 642.9 551 63.9
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 3.7e-182 642.1 546 64.8
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 6.2e-182 641.3 555 63.4
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 2.4e-181 639.4 557 63.9
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 2.4e-181 639.4 533 65.5
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 3.1e-181 639.0 542 64.6
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 5.3e-181 638.3 538 64.5
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 5.8e-180 634.8 509 68.2
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 1.3e-179 633.6 546 63.2
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 1.3e-179 633.6 539 63.5
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 1.7e-179 633.3 540 64.3
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 1.7e-179 633.3 538 63.9
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 8.4e-179 630.9 472 68.6
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.6e-177 626.7 492 66.7
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.7e-177 625.9 334 96.7
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 6.0e-177 624.8 491 66.6
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 8.7e-176 620.9 495 66.3
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 5.7e-175 618.2 459 68.8
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 6.3e-174 614.8 471 68.2
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 3.1e-173 612.5 516 62.2
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 9.0e-173 610.9 520 64.2
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 4.5e-172 608.6 468 66.9
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 4.5e-172 608.6 467 66.6
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 1.0e-171 607.4 472 67.2
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 2.2e-171 606.3 480 65.0
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 2.9e-171 605.9 481 65.7
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 1.1e-170 604.0 516 61.0
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 1.4e-170 603.6 556 59.9
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 3.2e-170 602.4 502 63.5
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 4.2e-170 602.1 467 65.5
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 1.2e-169 600.5 519 61.5
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.6e-169 600.1 481 65.1
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 2.7e-169 599.4 533 63.4
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 1.0e-168 597.4 535 60.0
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.3e-168 596.3 528 60.0
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 3.9e-168 595.5 440 70.0
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 2.5e-167 592.8 497 63.2
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 8.2e-166 587.8 443 68.2
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 3.1e-165 585.9 470 64.5
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 2.9e-163 579.3 473 63.4
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 8.5e-163 577.8 476 63.7
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 8.5e-163 577.8 523 60.8
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.4e-162 577.0 571 55.7
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 3.2e-162 575.9 480 62.9
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 3.2e-162 575.9 541 57.9
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 5.5e-162 575.1 545 58.3
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 5.5e-162 575.1 541 59.9
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.2e-161 573.9 472 63.6
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 3.6e-161 572.4 516 58.9
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 6.1e-161 571.6 459 64.5
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 1.0e-160 570.9 471 63.5
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 1.0e-160 570.9 514 59.7
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 1.8e-160 570.1 565 56.5
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 3.9e-160 568.9 480 62.7
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 1.1e-159 567.4 475 62.1
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 1.1e-159 567.4 514 59.3
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 4.1e-157 558.9 555 58.4
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.6e-156 556.2 531 57.1
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 1.8e-152 543.5 543 55.8
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.6e-148 530.4 451 61.6
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 1.3e-147 527.3 451 61.2
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 8.5e-147 524.6 494 58.1
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 2.3e-144 516.5 443 59.8
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 4.0e-144 515.8 517 54.9
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 7.0e-141 505.0 435 69.7
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.0e-140 503.4 541 52.3
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 7.2e-138 495.0 529 51.2
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 1.8e-133 480.3 488 55.3
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 5.9e-124 448.7 458 55.2
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 3.9e-123 446.0 373 63.0
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 1.7e-118 430.6 370 60.0
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 1.2e-116 424.5 472 45.3
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 5.8e-111 405.6 527 42.9
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 2.9e-110 403.3 473 45.2
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 4.9e-110 402.5 368 56.8
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 3.5e-108 396.4 463 45.4
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 1.0e-107 394.8 501 42.7
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 1.2e-97 361.3 479 41.5
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 3.9e-91 339.7 439 40.8
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 6.7e-59 232.6 507 29.8
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 1.7e-54 218.0 135 75.6
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 3.0e-51 207.2 424 30.0
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 2.4e-48 197.6 137 70.8
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 1.2e-47 195.3 372 40.1
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 1.4e-43 181.8 139 66.9
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 5.3e-40 169.9 264 42.8
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 2.3e-35 154.5 107 73.8
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 2.6e-26 124.4 92 66.3
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 2.2e-25 121.3 94 70.2
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 5.4e-24 116.7 467 21.8
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 2.0e-23 114.8 68 82.4
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 4.5e-23 113.6 114 58.8
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 8.0e-20 102.8 195 35.9
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 8.8e-19 99.4 119 52.1
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 3.4e-18 97.4 220 33.6
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 1.7e-14 85.1 189 34.9
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 5.0e-14 83.6 79 60.8
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 7.5e-10 69.7 124 38.7
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 5.9e-07 60.1 43 69.8
BraA02t07229Z Brassica rapa HOM05D011432 ORTHO05D014939 6.6e-06 56.6 40 65.0


User provided reference genes

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