Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2470 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.6e-23 110.5 62 100.0
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 9.2e-16 86.3 52 94.2
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 9.2e-16 86.3 52 94.2
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.6e-15 85.5 52 94.2
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.7e-15 84.7 52 92.3
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 3.5e-15 84.3 52 92.3
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 7.5e-10 66.6 55 69.1
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 9.8e-10 66.2 55 69.1
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 2.4e-08 61.6 53 66.0
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 3.2e-08 61.2 52 69.2
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 2.1e-07 58.5 54 66.7
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.7e-07 58.2 53 66.0
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.7e-07 58.2 53 66.0
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 2.7e-07 58.2 53 66.0
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 3.5e-07 57.8 52 65.4
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 6.0e-07 57.0 51 64.7
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.3e-06 55.8 53 64.2
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 1.7e-06 55.5 52 67.3
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 2.3e-06 55.1 52 63.5
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 3.0e-06 54.7 50 62.0
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 3.0e-06 54.7 51 60.8
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 3.9e-06 54.3 50 64.0
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 3.9e-06 54.3 59 50.8
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 5.1e-06 53.9 50 62.0
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 5.1e-06 53.9 48 62.5
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 6.6e-06 53.5 49 61.2
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 8.6e-06 53.1 50 62.0


User provided reference genes

Program Settings