Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2451 Fragaria x ananassa HOM05D004700 ORTHO05D005576 5.1e-172 607.8 347 100.0
FAN11G3801 Fragaria x ananassa HOM05D004700 ORTHO05D005576 1.2e-149 533.5 315 98.1
FvH4_3g17740 Fragaria vesca HOM05D004700 ORTHO05D005576 1.8e-129 466.5 315 89.5
RcHm_v2.0_Chr5g0029521 Rosa chinensis HOM05D004700 ORTHO05D005576 2.7e-125 452.6 315 86.7
Prupe.4G156500 Prunus persica HOM05D004700 ORTHO05D005576 2.8e-114 416.0 317 74.1
MD03G1247600 Malus domestica HOM05D004700 ORTHO05D005576 5.2e-108 395.2 317 71.0
Haze_09248 Corylus avellana HOM05D004700 ORTHO05D005576 9.5e-102 374.4 317 70.3
Hma1.2p1_0325F.1_g125830 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 3.0e-100 369.4 318 72.3
QL08p024163 Quercus lobata HOM05D004700 ORTHO05D005576 3.0e-100 369.4 322 67.4
CiPaw.12G110800 Carya illinoinensis HOM05D004700 ORTHO05D005576 8.9e-100 367.9 317 71.0
MELO3C016116.2 Cucumis melo HOM05D004700 ORTHO05D005576 8.9e-100 367.9 317 67.2
Glyma.15G209600 Glycine max HOM05D004700 ORTHO05D005576 8.9e-100 367.9 319 67.7
Phvul.011G168700 Phaseolus vulgaris HOM05D004700 ORTHO05D005576 2.6e-99 366.3 319 62.4
GSVIVG01014096001 Vitis vinifera HOM05D004700 ORTHO05D005576 4.4e-99 365.5 317 70.3
Atru.chr2.1968 Acer truncatum HOM05D004700 ORTHO05D005576 7.5e-99 364.8 319 72.1
TPR.G16482 Trifolium pratense HOM05D004700 ORTHO05D005576 7.5e-99 364.8 319 62.7
vmacro11972 Vaccinium macrocarpon HOM05D004700 ORTHO05D005576 9.8e-99 364.4 320 70.0
Atru.chr2.1937 Acer truncatum HOM05D004700 ORTHO05D005576 1.3e-98 364.0 319 72.1
Manes.15G098600 Manihot esculenta HOM05D004700 ORTHO05D005576 2.2e-98 363.2 319 65.8
Medtr8g054400 Medicago truncatula HOM05D004700 ORTHO05D005576 3.7e-98 362.5 310 62.6
Potri.011G104500 Populus trichocarpa HOM05D004700 ORTHO05D005576 3.7e-98 362.5 319 68.0
PGR031G0266 Punica granatum HOM05D004700 ORTHO05D005576 2.4e-97 359.8 318 71.4
CANSAT56G3173 Cannabis sativa HOM05D004700 ORTHO05D005576 5.4e-97 358.6 327 59.6
Glyma.09G099300 Glycine max HOM05D004700 ORTHO05D005576 9.2e-97 357.8 319 71.5
Ciclev10016084m.g Citrus clementina HOM05D004700 ORTHO05D005576 1.6e-96 357.1 317 68.1
Sabra11G0081100 Salix brachista HOM05D004700 ORTHO05D005576 1.6e-96 357.1 318 67.9
Hund08843 Selenicereus undatus HOM05D004700 ORTHO05D005576 2.0e-96 356.7 328 67.1
Actinidia12604 Actinidia chinensis HOM05D004700 ORTHO05D005576 3.5e-96 355.9 320 65.6
CiPaw.11G155900 Carya illinoinensis HOM05D004700 ORTHO05D005576 1.0e-95 354.4 317 67.8
Potri.001G383900 Populus trichocarpa HOM05D004700 ORTHO05D005576 1.3e-95 354.0 319 69.3
Actinidia03618 Actinidia chinensis HOM05D004700 ORTHO05D005576 1.7e-95 353.6 321 69.5
CSS0040857 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 1.7e-95 353.6 317 70.3
FAN25G1946 Fragaria x ananassa HOM05D004700 ORTHO05D005576 1.7e-95 353.6 241 92.9
EL10Ac4g08417 Beta vulgaris HOM05D004700 ORTHO05D005576 3.9e-95 352.4 318 67.3
Lalb_Chr19g0133711 Lupinus albus HOM05D004700 ORTHO05D005576 6.6e-95 351.7 326 60.1
CsaV3_4G008200 Cucumis sativus L. HOM05D004700 ORTHO05D005576 2.8e-93 346.3 318 65.4
Migut.H02024 Erythranthe guttata HOM05D004700 ORTHO05D005576 3.1e-92 342.8 323 60.4
MD11G1269900 Malus domestica HOM05D004700 ORTHO05D005576 5.2e-92 342.0 333 63.4
AT1G53490 Arabidopsis thaliana HOM05D004700 ORTHO05D005576 8.9e-92 341.3 321 60.7
AL1G62040 Arabidopsis lyrata HOM05D004700 ORTHO05D005576 1.2e-91 340.9 321 60.4
Sp1g40020 Schrenkiella parvula HOM05D004700 ORTHO05D005576 1.2e-91 340.9 321 61.4
THA.LOC104822577 Tarenaya hassleriana HOM05D004700 ORTHO05D005576 2.6e-91 339.7 321 57.6
Sed0011117 Sechium edule HOM05D004700 ORTHO05D005576 9.8e-91 337.8 318 63.8
Carub.0001s4267 Capsella rubella HOM05D004700 ORTHO05D005576 1.3e-90 337.4 321 60.1
Manes.03G079300 Manihot esculenta HOM05D004700 ORTHO05D005576 1.7e-90 337.0 319 66.5
Nn6g34422 Nelumbo nucifera HOM05D004700 ORTHO05D005576 1.7e-90 337.0 318 61.0
Thhalv10011691m.g Eutrema salsugineum HOM05D004700 ORTHO05D005576 2.2e-90 336.7 321 60.7
CAN.G68.2 Capsicum annuum HOM05D004700 ORTHO05D005576 3.7e-90 335.9 320 67.5
Oeu050672.1 Olea europaea HOM05D004700 ORTHO05D005576 3.7e-90 335.9 322 62.1
Sabra16G0252900 Salix brachista HOM05D004700 ORTHO05D005576 3.7e-90 335.9 345 64.3
TWI38G0400 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 3.7e-90 335.9 321 63.2
Duzib213G0278 Durio zibethinus HOM05D004700 ORTHO05D005576 4.9e-90 335.5 318 68.9
HanXRQChr15g0492381 Helianthus annuus HOM05D004700 ORTHO05D005576 4.9e-90 335.5 329 66.6
Lj3g0009226 Lotus japonicus HOM05D004700 ORTHO05D005576 6.4e-90 335.1 318 59.4
Rhsim06G0211800 Rhododendron simsii HOM05D004700 ORTHO05D005576 6.4e-90 335.1 323 69.7
Thecc.07G132900 Theobroma cacao HOM05D004700 ORTHO05D005576 6.4e-90 335.1 318 67.0
SGA_v2.0_scaffold181G39765 Striga asiatica HOM05D004700 ORTHO05D005576 1.1e-89 334.3 325 65.8
DCAR_013348 Daucus carota HOM05D004700 ORTHO05D005576 1.4e-89 334.0 323 67.2
Eucgr.F03234 Eucalyptus grandis HOM05D004700 ORTHO05D005576 1.9e-89 333.6 317 64.0
Nitab4.5_0000348g0050 Nicotiana tabacum HOM05D004700 ORTHO05D005576 3.2e-89 332.8 320 68.1
Hma1.2p1_0050F.1_g028780 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 9.2e-89 331.3 317 60.3
C03p91550 Brassica napus HOM05D004700 ORTHO05D005576 1.2e-88 330.9 321 58.3
BcaC01g01394 Brassica carinata HOM05D004700 ORTHO05D005576 1.6e-88 330.5 322 57.8
BolC3t21472H Brassica oleracea HOM05D004700 ORTHO05D005576 2.7e-88 329.7 321 57.6
Ca_22302_v3 Cicer arietinum L. HOM05D004700 ORTHO05D005576 1.0e-87 327.8 318 57.9
Cc05_g10710 Coffea canephora HOM05D004700 ORTHO05D005576 1.3e-87 327.4 322 63.7
Aa31LG10G1720 Aethionema arabicum HOM05D004700 ORTHO05D005576 1.7e-87 327.0 320 60.3
Psat4g157000 Pisum sativum HOM05D004700 ORTHO05D005576 1.5e-86 323.9 318 59.7
TWI38G0408 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 1.5e-86 323.9 318 56.3
ECA236G3615 Erigeron canadensis HOM05D004700 ORTHO05D005576 2.5e-86 323.2 354 53.4
PSO675G6346 Papaver somniferum HOM05D004700 ORTHO05D005576 3.3e-86 322.8 318 64.5
CARHR043720 Cardamine hirsuta HOM05D004700 ORTHO05D005576 4.3e-86 322.4 323 58.2
Gorai.007G331800 Gossypium raimondii HOM05D004700 ORTHO05D005576 4.3e-86 322.4 321 55.8
BcaB07g33326 Brassica carinata HOM05D004700 ORTHO05D005576 2.1e-85 320.1 321 56.4
Gohir.D11G302900 Gossypium hirsutum HOM05D004700 ORTHO05D005576 4.7e-85 318.9 321 55.5
Sopen08g005940 Solanum pennellii HOM05D004700 ORTHO05D005576 8.0e-85 318.2 320 65.6
Actinidia39420 Actinidia chinensis HOM05D004700 ORTHO05D005576 1.1e-84 317.8 323 59.4
Gohir.A11G289500 Gossypium hirsutum HOM05D004700 ORTHO05D005576 5.2e-84 315.5 321 54.8
arahy.Tifrunner.gnm1.ann1.7PP38G Arachis hypogaea HOM05D004700 ORTHO05D005576 1.5e-83 313.9 277 70.4
A05p18220 Brassica napus HOM05D004700 ORTHO05D005576 9.8e-83 311.2 320 55.9
arahy.Tifrunner.gnm1.ann1.DP9AR5 Arachis hypogaea HOM05D004700 ORTHO05D005576 1.7e-82 310.5 286 68.5
ATR0602G050 Amborella trichopoda HOM05D004700 ORTHO05D005576 2.2e-82 310.1 329 59.3
PSO541G3766 Papaver somniferum HOM05D004700 ORTHO05D005576 2.2e-82 310.1 319 60.5
Lj1A824T63 Lonicera japonica HOM05D004700 ORTHO05D005576 2.9e-82 309.7 297 63.6
MBI06_g08516_MAGBIO Magnolia biondii HOM05D004700 ORTHO05D005576 4.9e-82 308.9 333 62.2
BcaC08g43535 Brassica carinata HOM05D004700 ORTHO05D005576 6.4e-82 308.5 331 58.9
Os02g0232100 Oryza sativa ssp. japonica HOM05D004700 ORTHO05D005576 5.4e-81 305.4 319 56.4
Dinv26707 Davidia involucrata HOM05D004700 ORTHO05D005576 9.2e-81 304.7 319 65.2
BcaB02g10917 Brassica carinata HOM05D004700 ORTHO05D005576 2.1e-80 303.5 323 60.4
Solyc08g015770.4 Solanum lycopersicum HOM05D004700 ORTHO05D005576 3.0e-79 299.7 301 67.8
unitig_746.g26835 Utricularia gibba HOM05D004700 ORTHO05D005576 8.6e-79 298.1 351 49.6
Sc03g0010710 Simmondsia chinensis HOM05D004700 ORTHO05D005576 1.9e-78 297.0 294 65.3
TAR624G0400 Trochodendron aralioides HOM05D004700 ORTHO05D005576 3.3e-78 296.2 294 64.3
A06p00990 Brassica napus HOM05D004700 ORTHO05D005576 8.1e-77 291.6 368 51.6
BraA06t23327Z Brassica rapa HOM05D004700 ORTHO05D005576 8.1e-77 291.6 368 51.6
Nitab4.5_0012258g0020 Nicotiana tabacum HOM05D004700 ORTHO05D005576 5.8e-75 285.4 298 65.8
Zm00001eb239370 Zea mays HOM05D004700 ORTHO05D005576 7.6e-75 285.0 318 50.0
BraA08t32205Z Brassica rapa HOM05D004700 ORTHO05D005576 4.9e-74 282.3 318 51.6
BraA08t32208Z Brassica rapa HOM05D004700 ORTHO05D005576 6.4e-74 282.0 321 52.0
C06p09250 Brassica napus HOM05D004700 ORTHO05D005576 3.3e-70 269.6 363 51.8
BolC6t36002H Brassica oleracea HOM05D004700 ORTHO05D005576 3.3e-70 269.6 363 51.8
Nitab4.5_0000092g0360 Nicotiana tabacum HOM05D004700 ORTHO05D005576 9.6e-70 268.1 276 56.2
VMungo1127G0687 Vigna mungo HOM05D004700 ORTHO05D005576 3.6e-69 266.2 276 55.8
RhsimUnG0206700 Rhododendron simsii HOM05D004700 ORTHO05D005576 2.4e-68 263.5 324 56.5
Sabra11G0076400 Salix brachista HOM05D004700 ORTHO05D005576 2.4e-68 263.5 269 63.9
CSS0048020 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 4.0e-68 262.7 275 64.7
CSS0037390 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 8.9e-68 261.5 274 63.1
Cfa019516 Carpinus fangiana HOM05D004700 ORTHO05D005576 9.9e-67 258.1 254 66.9
ClCG07G010130 Citrullus lanatus HOM05D004700 ORTHO05D005576 1.3e-66 257.7 283 51.9
Aqoxy1G01902 Aquilegia oxysepala HOM05D004700 ORTHO05D005576 3.5e-64 249.6 215 68.8
Sed0005766 Sechium edule HOM05D004700 ORTHO05D005576 1.5e-62 244.2 213 69.0
COL.COLO4_17473 Corchorus olitorius HOM05D004700 ORTHO05D005576 2.0e-59 233.8 245 54.3
AUR62039578 Chenopodium quinoa HOM05D004700 ORTHO05D005576 9.9e-59 231.5 244 65.2
BcaB04g17077 Brassica carinata HOM05D004700 ORTHO05D005576 2.9e-58 229.9 310 47.1
AUR62019650 Chenopodium quinoa HOM05D004700 ORTHO05D005576 2.4e-57 226.9 244 63.5
Cpa.g.sc77.62 Carica papaya HOM05D004700 ORTHO05D005576 7.9e-56 221.9 245 52.7
PGSC0003DMG400013718 Solanum tuberosum HOM05D004700 ORTHO05D005576 5.1e-55 219.2 246 65.4
Peaxi162Scf00111g01325 Petunia axillaris HOM05D004700 ORTHO05D005576 8.7e-55 218.4 262 49.6
Dinv13363 Davidia involucrata HOM05D004700 ORTHO05D005576 1.3e-53 214.5 189 76.7
MSTRG.12860 Avicennia marina HOM05D004700 ORTHO05D005576 1.6e-53 214.2 250 49.6
Lsat_1_v5_gn_7_101801 Lactuca sativa HOM05D004700 ORTHO05D005576 1.1e-52 211.5 304 46.4
Sabra11G0075900 Salix brachista HOM05D004700 ORTHO05D005576 1.2e-51 208.0 215 65.1
Ah.04g164030 Amaranthus hybridus HOM05D004700 ORTHO05D005576 2.6e-51 206.8 243 60.5
DCAR_021040 Daucus carota HOM05D004700 ORTHO05D005576 6.0e-48 195.7 253 61.3
CDE06G2539 Ceratophyllum demersum HOM05D004700 ORTHO05D005576 1.8e-47 194.1 256 53.1
Peaxi162Scf00000g00759 Petunia axillaris HOM05D004700 ORTHO05D005576 1.8e-47 194.1 244 58.6
Ah.06g187700 Amaranthus hybridus HOM05D004700 ORTHO05D005576 3.0e-47 193.4 247 59.1
BraA05t20718Z Brassica rapa HOM05D004700 ORTHO05D005576 6.9e-44 182.2 122 73.0
Mapoly0001s0250 Marchantia polymorpha HOM05D004700 ORTHO05D005576 3.4e-43 179.9 326 45.1
BcaC08g44093 Brassica carinata HOM05D004700 ORTHO05D005576 4.5e-43 179.5 247 47.0
Oeu010032.1 Olea europaea HOM05D004700 ORTHO05D005576 7.1e-41 172.2 307 38.4
CDE02G3773 Ceratophyllum demersum HOM05D004700 ORTHO05D005576 2.3e-39 167.2 298 36.9
C06p14980 Brassica napus HOM05D004700 ORTHO05D005576 9.6e-38 161.8 246 44.7
BolC6t36675H Brassica oleracea HOM05D004700 ORTHO05D005576 9.6e-38 161.8 246 44.7
Pp3c8_15890 Physcomitrium patens HOM05D004700 ORTHO05D005576 7.6e-35 152.1 319 35.1
AagrBONN_evm.TU.Sc2ySwM_362.885 Anthoceros agrestis HOM05D004700 ORTHO05D005576 1.4e-33 147.9 188 58.0
Gorai.002G047100 Gossypium raimondii HOM05D004700 ORTHO05D005576 1.0e-31 141.7 257 45.9
Actinidia04619 Actinidia chinensis HOM05D004700 ORTHO05D005576 2.3e-31 140.6 78 80.8
Sabra11G0075300 Salix brachista HOM05D004700 ORTHO05D005576 1.9e-30 137.5 175 49.1
Zm00001eb164550 Zea mays HOM05D004700 ORTHO05D005576 2.4e-28 130.6 73 74.0
Sc07g0002390 Simmondsia chinensis HOM05D004700 ORTHO05D005576 2.0e-27 127.5 146 58.9
Sabra11G0075500 Salix brachista HOM05D004700 ORTHO05D005576 1.9e-25 120.9 150 61.3
SEGI_00597 Sequoiadendron giganteum HOM05D004700 ORTHO05D005576 2.5e-25 120.6 252 35.7
Ah.06g187690 Amaranthus hybridus HOM05D004700 ORTHO05D000031 7.2e-25 119.0 93 62.4
Actinidia04620 Actinidia chinensis HOM05D004700 ORTHO05D005576 1.6e-24 117.9 136 50.0
Aqoxy1G01901 Aquilegia oxysepala HOM05D004700 ORTHO05D005576 2.7e-24 117.1 98 62.2
Sabra11G0076300 Salix brachista HOM05D004700 ORTHO05D005576 1.1e-22 111.7 182 37.9
Zm00001eb046150 Zea mays HOM05D004700 ORTHO05D005576 4.8e-21 106.3 103 50.5
Gohir.D01G038350 Gossypium hirsutum HOM05D004700 ORTHO05D005576 3.2e-17 93.6 169 49.7
Zm00001eb352830 Zea mays HOM05D004700 ORTHO05D005576 3.6e-16 90.1 47 78.7
Cre03.g161500 Chlamydomonas reinhardtii HOM05D004700 ORTHO05D005576 6.1e-16 89.4 117 35.9
Zm00001eb337320 Zea mays HOM05D004700 ORTHO05D005576 2.0e-14 84.3 127 40.9
Nitab4.5_0000244g0440 Nicotiana tabacum HOM05D000856 ORTHO05D001792 5.7e-14 82.8 110 46.4
Zm00001eb364990 Zea mays HOM05D001185 ORTHO05D005576 9.7e-14 82.0 117 41.0
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 4.5e-11 73.2 51 70.6
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 7.7e-11 72.4 49 73.5
Sc07g0002380 Simmondsia chinensis HOM05D004700 ORTHO05D005576 3.2e-09 67.0 78 52.6


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