Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2264 Fragaria x ananassa HOM05D002577 ORTHO05D002883 1.5e-61 239.2 113 100.0
FvH4_3g29450 Fragaria vesca HOM05D002577 ORTHO05D002883 3.5e-21 105.1 104 60.6
FAN11G0009 Fragaria x ananassa HOM05D002577 ORTHO05D002883 3.5e-21 105.1 104 60.6
FAN21G2066 Fragaria x ananassa HOM05D002577 ORTHO05D002883 1.0e-20 103.6 52 98.1
FAN25G3684 Fragaria x ananassa HOM05D002577 ORTHO05D002883 1.0e-20 103.6 52 98.1
RcHm_v2.0_Chr5g0053941 Rosa chinensis HOM05D002577 ORTHO05D002883 9.5e-19 97.1 104 55.8
RcHm_v2.0_Chr5g0053891 Rosa chinensis HOM05D002577 ORTHO05D002883 2.6e-16 89.0 56 76.8
Oeu049383.1 Olea europaea HOM05D002577 ORTHO05D002883 1.1e-11 73.6 96 44.8
Prupe.4G240600 Prunus persica HOM05D002577 ORTHO05D002883 1.9e-11 72.8 104 49.0
Thecc.07G016100 Theobroma cacao HOM05D002577 ORTHO05D002883 2.5e-11 72.4 98 42.9
MD11G1201400 Malus domestica HOM05D002577 ORTHO05D002883 9.5e-11 70.5 99 47.5
Thecc.07G016300 Theobroma cacao HOM05D002577 ORTHO05D002883 1.2e-10 70.1 67 53.7
Gohir.A01G090400 Gossypium hirsutum HOM05D002577 ORTHO05D002883 2.1e-10 69.3 68 51.5
Oeu049352.1 Olea europaea HOM05D002577 ORTHO05D002883 3.6e-10 68.6 53 60.4
Gorai.002G098900 Gossypium raimondii HOM05D002577 ORTHO05D002883 4.7e-10 68.2 68 51.5
Oeu057091.1 Olea europaea HOM05D002577 ORTHO05D002883 1.4e-09 66.6 55 58.2
COL.COLO4_09811 Corchorus olitorius HOM05D002577 ORTHO05D004280 2.3e-09 65.9 68 48.5
FAN25G0637 Fragaria x ananassa HOM05D002577 ORTHO05D002883 2.3e-09 65.9 58 58.6
Gohir.D01G075700 Gossypium hirsutum HOM05D002577 ORTHO05D002883 2.3e-09 65.9 68 50.0
RcHm_v2.0_Chr5g0053881 Rosa chinensis HOM05D002577 ORTHO05D002883 2.3e-09 65.9 58 56.9
TAR629G2127 Trochodendron aralioides HOM05D002577 ORTHO05D002883 3.1e-09 65.5 97 41.2
arahy.Tifrunner.gnm1.ann1.W56MR2 Arachis hypogaea HOM05D002577 ORTHO05D002883 4.0e-09 65.1 85 45.9
arahy.Tifrunner.gnm1.ann1.HSP4SF Arachis hypogaea HOM05D002577 ORTHO05D002883 5.2e-09 64.7 64 53.1
Duzib170G1016 Durio zibethinus HOM05D002577 ORTHO05D002883 5.2e-09 64.7 65 52.3
Atru.chr2.3669 Acer truncatum HOM05D002577 ORTHO05D002883 6.8e-09 64.3 98 42.9
DCAR_009429 Daucus carota HOM05D002577 ORTHO05D002883 6.8e-09 64.3 55 56.4
Duzib213G1039 Durio zibethinus HOM05D002577 ORTHO05D002883 6.8e-09 64.3 69 47.8
FAN11G2317 Fragaria x ananassa HOM05D002577 ORTHO05D002883 6.8e-09 64.3 58 56.9
FAN21G3242 Fragaria x ananassa HOM05D002577 ORTHO05D002883 6.8e-09 64.3 58 56.9
MD03G1185100 Malus domestica HOM05D002577 ORTHO05D002883 8.9e-09 63.9 104 40.4
Migut.M01663 Erythranthe guttata HOM05D002577 ORTHO05D002883 1.2e-08 63.5 51 60.8
FvH4_3g29440 Fragaria vesca HOM05D002577 ORTHO05D002883 1.2e-08 63.5 55 58.2
DCAR_009430 Daucus carota HOM05D002577 ORTHO05D002883 1.5e-08 63.2 98 42.9
Prupe.4G241000 Prunus persica HOM05D002577 ORTHO05D002883 1.5e-08 63.2 58 56.9
Sed0006368 Sechium edule HOM05D002577 ORTHO05D002883 1.5e-08 63.2 64 50.0
Lj8C177T8 Lonicera japonica HOM05D002577 ORTHO05D002883 2.6e-08 62.4 48 58.3
Nitab4.5_0003876g0010 Nicotiana tabacum HOM05D002577 ORTHO05D002883 2.6e-08 62.4 102 41.2
ClCG09G021190 Citrullus lanatus HOM05D002577 ORTHO05D002883 3.4e-08 62.0 63 49.2
Aqoxy7G03071 Aquilegia oxysepala HOM05D002577 ORTHO05D002883 4.4e-08 61.6 102 38.2
Cfa020210 Carpinus fangiana HOM05D002577 ORTHO05D002883 4.4e-08 61.6 59 52.5
CiPaw.12G136900 Carya illinoinensis HOM05D002577 ORTHO05D002883 4.4e-08 61.6 54 61.1
Cc05_g14830 Coffea canephora HOM05D002577 ORTHO05D002883 4.4e-08 61.6 55 47.3
Nn1g07483 Nelumbo nucifera HOM05D002577 ORTHO05D002883 4.4e-08 61.6 105 36.2
TAR629G0591 Trochodendron aralioides HOM05D002577 ORTHO05D002883 4.4e-08 61.6 103 38.8
CiPaw.12G136800 Carya illinoinensis HOM05D002577 ORTHO05D002883 7.5e-08 60.8 54 59.3
Lalb_Chr15g0082001 Lupinus albus HOM05D002577 ORTHO05D002883 7.5e-08 60.8 67 49.3
CANSAT11G1731 Cannabis sativa HOM05D002577 ORTHO05D002883 9.9e-08 60.5 52 53.8
Lsat_1_v5_gn_4_56181 Lactuca sativa HOM05D002577 ORTHO05D002883 9.9e-08 60.5 59 50.8
Peaxi162Scf00612g00019 Petunia axillaris HOM05D002577 ORTHO05D002883 9.9e-08 60.5 102 39.2
PGSC0003DMG400022179 Solanum tuberosum HOM05D002577 ORTHO05D002883 1.3e-07 60.1 49 57.1
Gohir.A13G133700 Gossypium hirsutum HOM05D002577 ORTHO05D002883 1.7e-07 59.7 53 56.6
Potri.001G366200 Populus trichocarpa HOM05D002577 ORTHO05D002883 1.7e-07 59.7 94 38.3
Actinidia37161 Actinidia chinensis HOM05D002577 ORTHO05D002883 2.2e-07 59.3 99 38.4
Eucgr.F02058 Eucalyptus grandis HOM05D002577 ORTHO05D002883 2.2e-07 59.3 90 40.0
MD00G1099400 Malus domestica HOM05D002577 ORTHO05D002883 2.2e-07 59.3 58 51.7
Solyc07g065380.4 Solanum lycopersicum HOM05D002577 ORTHO05D002883 2.2e-07 59.3 47 57.4
CSS0011926 Camellia sinensis var. sinensis HOM05D002577 ORTHO05D002883 2.9e-07 58.9 108 38.0
Psat7g122680 Pisum sativum HOM05D002577 ORTHO05D002883 2.9e-07 58.9 53 52.8
Manes.03G140100 Manihot esculenta HOM05D002577 ORTHO05D002883 3.7e-07 58.5 34 73.5
Manes.03G140633 Manihot esculenta HOM05D002577 ORTHO05D002883 3.7e-07 58.5 34 73.5
TWI38G1482 Tripterygium wilfordii HOM05D002577 ORTHO05D002883 3.7e-07 58.5 57 50.9
SEGI_08340 Sequoiadendron giganteum HOM05D002577 ORTHO05D002883 4.9e-07 58.2 97 39.2
GSVIVG01014653001 Vitis vinifera HOM05D002577 ORTHO05D002883 4.9e-07 58.2 60 46.7
AagrBONN_evm.TU.Sc2ySwM_344.910 Anthoceros agrestis HOM05D002577 ORTHO05D002883 6.4e-07 57.8 113 35.4
Dinv26613 Davidia involucrata HOM05D002577 ORTHO05D002883 6.4e-07 57.8 61 45.9
SalBow8G5579 Salvia bowleyana HOM05D002577 ORTHO05D002883 6.4e-07 57.8 85 38.8
MSTRG.15788 Avicennia marina HOM05D002577 ORTHO05D002883 8.3e-07 57.4 44 59.1
EL10Ac4g07602 Beta vulgaris HOM05D002577 ORTHO05D002883 8.3e-07 57.4 57 47.4
CsaV3_7G018310 Cucumis sativus L. HOM05D002577 ORTHO05D002883 8.3e-07 57.4 97 37.1
Nn1g03210 Nelumbo nucifera HOM05D002577 ORTHO05D002883 8.3e-07 57.4 44 59.1
SEGI_14218 Sequoiadendron giganteum HOM05D002577 ORTHO05D002883 8.3e-07 57.4 97 38.1
CAN.G337.17 Capsicum annuum HOM05D002577 ORTHO05D002883 1.1e-06 57.0 51 52.9
Haze_09799 Corylus avellana HOM05D002577 ORTHO05D002883 1.1e-06 57.0 50 50.0
HanXRQChr11g0333381 Helianthus annuus HOM05D002577 ORTHO05D002883 1.1e-06 57.0 97 42.3
Rhsim04G0013600 Rhododendron simsii HOM05D002577 ORTHO05D002883 1.1e-06 57.0 65 46.2
Sp1g41510 Schrenkiella parvula HOM05D002577 ORTHO05D002883 1.1e-06 57.0 65 46.2
Hund23122 Selenicereus undatus HOM05D002577 ORTHO05D002883 1.1e-06 57.0 99 38.4
Nitab4.5_0000272g0030 Nicotiana tabacum HOM05D002577 ORTHO05D002883 1.4e-06 56.6 103 34.0
Phvul.L007543 Phaseolus vulgaris HOM05D002577 ORTHO05D002883 1.4e-06 56.6 98 35.7
vmacro09655 Vaccinium macrocarpon HOM05D002577 ORTHO05D002883 1.4e-06 56.6 101 40.6
CSS0008965 Camellia sinensis var. sinensis HOM05D002577 ORTHO05D002883 1.9e-06 56.2 102 39.2
CiPaw.13G090800 Carya illinoinensis HOM05D002577 ORTHO05D002883 1.9e-06 56.2 108 35.2
MELO3C024920.2 Cucumis melo HOM05D002577 ORTHO05D002883 1.9e-06 56.2 97 37.1
Duzib213G0834 Durio zibethinus HOM05D002577 ORTHO05D002883 1.9e-06 56.2 57 47.4
Hma1.2p1_0545F.1_g176000 Hydrangea macrophylla HOM05D002577 ORTHO05D002883 1.9e-06 56.2 82 35.4
arahy.Tifrunner.gnm1.ann1.1Q0IUD Arachis hypogaea HOM05D002577 ORTHO05D002883 2.4e-06 55.8 106 32.1
Glyma.15G036200 Glycine max HOM05D002577 ORTHO05D002883 2.4e-06 55.8 98 35.7
Gorai.013G153700 Gossypium raimondii HOM05D002577 ORTHO05D002883 2.4e-06 55.8 40 62.5
TWI39G0581 Tripterygium wilfordii HOM05D002577 ORTHO05D002883 2.4e-06 55.8 54 48.1
GSVIVG01014647001 Vitis vinifera HOM05D002577 ORTHO05D002883 2.4e-06 55.8 50 56.0
Aa31LG10G270 Aethionema arabicum HOM05D002577 ORTHO05D002883 3.2e-06 55.5 64 40.6
Ciclev10010292m.g Citrus clementina HOM05D002577 ORTHO05D002883 3.2e-06 55.5 57 50.9
Lalb_Chr24g0394061 Lupinus albus HOM05D002577 ORTHO05D002883 3.2e-06 55.5 98 36.7
SGA_v2.0_scaffold171G38882 Striga asiatica HOM05D001580 ORTHO05D001517 3.2e-06 55.5 33 75.8
TPR.G30740 Trifolium pratense HOM05D002577 ORTHO05D002883 3.2e-06 55.5 61 45.9
VMungo1080G1816 Vigna mungo HOM05D002577 ORTHO05D002883 3.2e-06 55.5 98 35.7
BolC3t21628H Brassica oleracea HOM05D002577 ORTHO05D002883 4.1e-06 55.1 64 45.3
Peaxi162Scf00122g00410 Petunia axillaris HOM05D002577 ORTHO05D002883 4.1e-06 55.1 105 34.3
Potri.001G366100 Populus trichocarpa HOM05D002577 ORTHO05D002883 4.1e-06 55.1 53 49.1
CSS0040246 Camellia sinensis var. sinensis HOM05D002577 ORTHO05D002883 5.4e-06 54.7 87 40.2
Gohir.D13G137100 Gossypium hirsutum HOM05D002577 ORTHO05D002883 5.4e-06 54.7 38 63.2
Sopen06g001580 Solanum pennellii HOM05D002577 ORTHO05D002883 5.4e-06 54.7 72 40.3
VMungo1105G0001 Vigna mungo HOM05D002577 ORTHO05D002883 5.4e-06 54.7 98 35.7
GSVIVG01014650001 Vitis vinifera HOM05D002577 ORTHO05D002883 5.4e-06 54.7 50 56.0
Ah.06g181310 Amaranthus hybridus HOM05D002577 ORTHO05D002883 7.1e-06 54.3 87 40.2
Ca_03372_v3 Cicer arietinum L. HOM05D002577 ORTHO05D002883 7.1e-06 54.3 64 46.9
ECA236G2900 Erigeron canadensis HOM05D002577 ORTHO05D002883 7.1e-06 54.3 106 34.9
Thhalv10011655m.g Eutrema salsugineum HOM05D002577 ORTHO05D002883 7.1e-06 54.3 63 47.6
Hma1.2p1_1827F.1_g304450 Hydrangea macrophylla HOM05D002577 ORTHO05D002883 7.1e-06 54.3 53 52.8
Lj6g0018990 Lotus japonicus HOM05D002577 ORTHO05D002883 7.1e-06 54.3 64 43.8
Medtr3g058630 Medicago truncatula HOM05D002577 ORTHO05D002883 7.1e-06 54.3 62 46.8
A08p00200 Brassica napus HOM05D002577 ORTHO05D002883 9.2e-06 53.9 64 46.9
MBI16_g14391_MAGBIO Magnolia biondii HOM05D002577 ORTHO05D002883 9.2e-06 53.9 89 37.1
QL08p004791 Quercus lobata HOM05D002577 ORTHO05D002883 9.2e-06 53.9 62 43.5
Solyc06g005620.3 Solanum lycopersicum HOM05D002577 ORTHO05D002883 9.2e-06 53.9 55 43.6


User provided reference genes

Program Settings