Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2210 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.0e-143 512.3 243 100.0
FAN11G3238 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.3e-109 397.5 197 93.9
FvH4_3g12920 Fragaria vesca HOM05D001729 ORTHO05D001155 5.8e-106 387.9 193 93.8
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 2.0e-90 336.3 199 81.4
RcHm_v2.0_Chr5g0021011 Rosa chinensis HOM05D001729 ORTHO05D001155 8.1e-84 314.3 210 74.3
FAN11G0139 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.2e-19 98.2 204 33.3
FAN15G1054 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.2e-19 98.2 199 36.7
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 1.2e-18 97.8 244 34.0
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 2.0e-18 97.1 208 34.6
FvH4_2g19920 Fragaria vesca HOM05D001729 ORTHO05D001155 3.5e-18 96.3 197 36.5
FAN24G2147 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.5e-18 96.3 197 36.5
RcHm_v2.0_Chr6g0285591 Rosa chinensis HOM05D001729 ORTHO05D001155 3.5e-18 96.3 193 37.3
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 4.5e-18 95.9 205 35.1
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 5.9e-18 95.5 195 34.9
FAN02G3911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.6e-17 92.0 164 36.0
FvH4_6g46242 Fragaria vesca HOM05D001729 ORTHO05D001155 8.6e-17 91.7 134 38.1
FvH4_6g46280 Fragaria vesca HOM05D001729 ORTHO05D001155 1.5e-16 90.9 137 38.0
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 2.5e-16 90.1 201 32.8
FvH4_3g35490 Fragaria vesca HOM05D001729 ORTHO05D001155 3.3e-16 89.7 176 34.1
FAN27G2714 Fragaria x ananassa HOM05D001115 ORTHO05D001023 5.6e-16 89.0 202 35.6
FvH4_6g46260 Fragaria vesca HOM05D001729 ORTHO05D001155 7.3e-16 88.6 207 31.4
RcHm_v2.0_Chr2g0164721 Rosa chinensis HOM05D001729 ORTHO05D001155 7.3e-16 88.6 206 31.6
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-15 87.8 196 34.7
FAN16G0429 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-15 87.4 169 35.5
FvH4_6g31981 Fragaria vesca HOM05D001729 ORTHO05D001155 2.8e-15 86.7 196 30.6
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 4.7e-15 85.9 200 34.0
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.7e-15 85.9 200 34.0
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.7e-15 85.9 200 34.0
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 4.7e-15 85.9 106 41.5
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 6.1e-15 85.5 209 34.0
FvH4_4g17121 Fragaria vesca HOM05D001729 ORTHO05D001155 2.3e-14 83.6 144 34.0
MD02G1008700 Malus domestica HOM05D001729 ORTHO05D001155 3.1e-14 83.2 201 33.3
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.2e-14 82.4 195 34.4
MD02G1008900 Malus domestica HOM05D001729 ORTHO05D001155 5.2e-14 82.4 201 33.3
FvH4_6g45890 Fragaria vesca HOM05D001729 ORTHO05D001155 3.4e-13 79.7 195 34.4
FAN05G2911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.8e-13 79.0 199 33.7
FAN12G2569 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.5e-13 78.6 199 31.2
FAN14G1791 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-12 77.0 218 28.4
FAN14G3193 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.7e-12 76.3 195 33.8
Prupe.3G265100 Prunus persica HOM05D001729 ORTHO05D001155 3.7e-12 76.3 213 31.9
FAN05G4264 Fragaria x ananassa HOM05D001526 ORTHO05D001417 4.9e-12 75.9 164 33.5
Prupe.3G059600 Prunus persica HOM05D001729 ORTHO05D001155 8.3e-12 75.1 129 37.2
RcHm_v2.0_Chr6g0276071 Rosa chinensis HOM05D001729 ORTHO05D001155 8.3e-12 75.1 89 40.4
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 1.1e-11 74.7 205 28.3
FAN02G3887 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-11 73.9 200 30.5
Prupe.1G509300 Prunus persica HOM05D001729 ORTHO05D001155 2.4e-11 73.6 196 30.1
Prupe.6G075500 Prunus persica HOM05D001729 ORTHO05D001155 5.4e-11 72.4 222 28.8
FAN18G1542 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.0e-11 72.0 127 35.4
FAN18G4057 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.0e-11 72.0 127 35.4
Prupe.6G075400 Prunus persica HOM05D001729 ORTHO05D001155 1.6e-10 70.9 201 31.8
FAN08G1373 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.7e-10 70.1 127 35.4
FAN14G0370 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.5e-10 69.7 85 41.2
FAN09G4277 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.8e-10 68.6 170 30.6
FAN25G0589 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.8e-10 68.6 112 36.6
RcHm_v2.0_Chr5g0081211 Rosa chinensis HOM05D001729 ORTHO05D001155 1.0e-09 68.2 142 33.1
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-09 67.8 199 35.2
Prupe.4G053600 Prunus persica HOM05D001729 ORTHO05D001155 1.3e-09 67.8 223 27.4
Prupe.1G512600 Prunus persica HOM05D001729 ORTHO05D001155 3.0e-09 66.6 198 29.3
RcHm_v2.0_Chr5g0081171 Rosa chinensis HOM05D001729 ORTHO05D001155 3.9e-09 66.2 231 28.1
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-09 65.9 135 37.0
MD03G1256400 Malus domestica HOM05D001729 ORTHO05D001155 6.6e-09 65.5 144 34.0
Prupe.8G110700 Prunus persica HOM05D001729 ORTHO05D001155 6.6e-09 65.5 212 28.3
FAN03G3155 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.6e-09 65.1 200 31.5
FvH4_4g31310 Fragaria vesca HOM05D001729 ORTHO05D001155 1.5e-08 64.3 198 26.8
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-08 64.3 222 29.7
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 1.5e-08 64.3 201 27.9
FvH4_6g37041 Fragaria vesca HOM05D001729 ORTHO05D001155 3.3e-08 63.2 123 34.1
FAN05G0208 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.3e-08 63.2 241 28.2
FAN16G2506 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.3e-08 63.2 146 30.1
RcHm_v2.0_Chr2g0089331 Rosa chinensis HOM05D001729 ORTHO05D001155 3.3e-08 63.2 134 32.8
FAN05G5688 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.6e-08 62.4 135 37.8
FvH4_3g43730 Fragaria vesca HOM05D001729 ORTHO05D001155 9.5e-08 61.6 160 28.8
FvH4_3g44471 Fragaria vesca HOM05D001729 ORTHO05D001155 9.5e-08 61.6 208 28.4
FAN25G0505 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.5e-08 61.6 102 36.3
FAN06G0177 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-07 61.2 87 41.4
FvH4_7g12841 Fragaria vesca HOM05D001729 ORTHO05D001155 1.6e-07 60.8 87 41.4
FvH4_3g43682 Fragaria vesca HOM05D001729 ORTHO05D001155 2.1e-07 60.5 134 33.6
Prupe.1G510700 Prunus persica HOM05D001729 ORTHO05D001155 2.1e-07 60.5 94 39.4
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.8e-07 60.1 89 43.8
FvH4_3g43770 Fragaria vesca HOM05D001729 ORTHO05D001155 3.6e-07 59.7 149 31.5
FAN20G1095 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.6e-07 59.7 83 43.4
FAN21G0302 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.6e-07 59.7 135 32.6
FAN02G0048 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.2e-07 58.9 232 29.7
FAN01G0742 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.0e-07 58.5 87 40.2
FAN06G3932 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.0e-07 58.5 87 40.2
MD15G1018100 Malus domestica HOM05D001729 ORTHO05D001155 8.0e-07 58.5 123 34.1
RcHm_v2.0_Chr5g0018111 Rosa chinensis HOM05D001729 ORTHO05D001155 1.1e-06 58.2 198 27.8
FvH4_4g18120 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-06 57.8 96 35.4
FvH4_6g05201 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-06 57.8 57 43.9
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-06 57.8 220 30.0
FAN02G2194 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-06 57.0 206 29.1
FAN02G3994 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-06 57.0 133 33.1
FAN07G1354 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-06 57.0 97 34.0
FAN09G0608 Fragaria x ananassa HOM05D001729 ORTHO05D045926 2.3e-06 57.0 88 36.4
RcHm_v2.0_Chr1g0380481 Rosa chinensis HOM05D001729 ORTHO05D001155 2.3e-06 57.0 262 24.4
FvH4_1g02011 Fragaria vesca HOM05D001729 ORTHO05D001155 3.1e-06 56.6 162 30.2
FAN19G0745 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-06 56.6 162 30.2
FAN05G2640 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.0e-06 56.2 86 43.0
FAN05G5187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.0e-06 56.2 86 43.0
MD14G1026900 Malus domestica HOM05D001729 ORTHO05D001155 5.2e-06 55.8 147 35.4
FAN07G0163 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.8e-06 55.5 96 33.3
FAN14G4985 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.9e-06 55.1 143 32.2
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 8.9e-06 55.1 136 27.2


User provided reference genes

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