Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.5e-187 659.4 352 100.0
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 1.5e-110 403.7 262 87.8
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.8e-109 398.7 260 87.3
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.4e-107 392.5 262 85.5
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.2e-106 389.8 262 85.5
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 1.1e-92 344.4 269 77.3
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.7e-43 178.7 207 60.4
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 1.7e-42 177.6 289 47.8
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 1.1e-36 158.3 374 36.4
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 1.8e-36 157.5 356 39.3
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 5.9e-35 152.5 322 36.6
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 7.7e-35 152.1 361 39.9
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.6e-32 144.4 320 36.9
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 4.4e-30 136.3 283 42.4
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 1.3e-29 134.8 333 36.6
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 1.7e-29 134.4 309 38.5
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 5.4e-28 129.4 326 35.3
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 7.0e-28 129.0 418 31.3
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 9.2e-28 128.6 346 32.7
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 4.6e-27 126.3 371 32.9
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 5.9e-27 125.9 209 41.6
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 3.3e-25 120.2 342 31.6
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 4.3e-25 119.8 350 34.9
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 7.3e-25 119.0 299 34.8
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 8.0e-24 115.5 344 32.0
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 1.4e-23 114.8 357 33.1
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 2.3e-23 114.0 324 33.3
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 5.2e-23 112.8 371 32.9
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 4.4e-22 109.8 339 33.9
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 9.8e-22 108.6 348 33.6
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 1.9e-20 104.4 331 29.6
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 4.1e-20 103.2 289 35.6
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 7.0e-20 102.4 369 30.1
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 2.0e-19 100.9 314 31.5
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 3.5e-19 100.1 285 34.0
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 4.6e-19 99.8 329 31.6
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 5.0e-18 96.3 268 34.0
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 2.5e-17 94.0 294 31.6
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 3.3e-17 93.6 351 29.6
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 3.3e-17 93.6 353 27.8
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 4.3e-17 93.2 294 33.3
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 1.2e-16 91.7 276 34.1
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 2.1e-16 90.9 130 44.6
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 2.3e-15 87.4 269 32.3
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 6.8e-15 85.9 270 32.2
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 2.0e-14 84.3 343 29.7
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 3.4e-14 83.6 320 29.4
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 4.4e-14 83.2 264 29.5
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 4.4e-14 83.2 364 29.7
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 5.8e-14 82.8 275 32.7
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 7.5e-14 82.4 273 33.3
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 1.7e-13 81.3 269 32.7
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 2.9e-13 80.5 264 33.0
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 2.9e-13 80.5 242 33.5
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 8.3e-13 79.0 318 27.4
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 5.4e-12 76.3 253 32.8
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 2.1e-11 74.3 66 53.0
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 2.7e-11 73.9 288 27.8
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 2.7e-11 73.9 278 28.8
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.5e-11 73.6 277 30.0
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 2.3e-10 70.9 285 29.1
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 5.1e-10 69.7 259 31.7
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 5.1e-10 69.7 282 30.9
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 6.6e-10 69.3 290 27.9
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 1.1e-09 68.6 311 28.3
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 1.5e-09 68.2 317 27.4
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 4.3e-09 66.6 270 28.9
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 5.6e-09 66.2 289 29.4
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 1.2e-08 65.1 266 31.2
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 1.2e-08 65.1 362 28.2
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.6e-08 64.7 267 27.3
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 2.8e-08 63.9 261 25.3
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 2.8e-08 63.9 314 25.2
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 4.7e-08 63.2 287 29.6
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 6.2e-08 62.8 278 29.5
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 6.2e-08 62.8 316 27.5
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 1.1e-07 62.0 280 27.1
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 1.8e-07 61.2 286 28.7
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 3.1e-07 60.5 271 26.2
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 4.0e-07 60.1 299 26.1
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 6.8e-07 59.3 184 33.7
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 8.9e-07 58.9 273 28.2
COL.COLO4_22633 Corchorus olitorius HOM05D007535 ORTHO05D008520 1.2e-06 58.5 194 35.6
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 1.5e-06 58.2 279 28.0
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 3.4e-06 57.0 298 28.5
MD11G1169000 Malus domestica HOM05D007535 ORTHO05D008520 4.4e-06 56.6 140 39.3


User provided reference genes

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