Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G1650 Fragaria x ananassa HOM05D004783 ORTHO05D005581 5.3e-249 864.4 613 100.0
FAN10G2924 Fragaria x ananassa HOM05D004783 ORTHO05D005581 3.9e-244 848.2 580 93.4
FAN05G2593 Fragaria x ananassa HOM05D004783 ORTHO05D005581 1.6e-229 799.7 551 99.1
FAN27G1421 Fragaria x ananassa HOM05D004783 ORTHO05D005581 3.7e-226 788.5 571 91.6
FAN11G3663 Fragaria x ananassa HOM05D004783 ORTHO05D005581 9.2e-209 730.7 551 94.6
FAN25G1477 Fragaria x ananassa HOM05D004783 ORTHO05D005581 5.5e-169 598.6 737 67.0
FvH4_3g29690 Fragaria vesca HOM05D004783 ORTHO05D005581 8.7e-167 591.3 737 66.1
FAN11G1373 Fragaria x ananassa HOM05D004783 ORTHO05D005581 7.4e-166 588.2 737 65.9
FAN15G2228 Fragaria x ananassa HOM05D004783 ORTHO05D005581 1.3e-165 587.4 737 63.9
FAN16G2696 Fragaria x ananassa HOM05D004783 ORTHO05D005581 3.4e-163 579.3 737 65.7
FAN07G0420 Fragaria x ananassa HOM05D004783 ORTHO05D005581 2.2e-117 427.2 363 98.9
RcHm_v2.0_Chr5g0055041 Rosa chinensis HOM05D004783 ORTHO05D005581 4.3e-105 386.3 717 50.6
Prupe.8G057300 Prunus persica HOM05D004783 ORTHO05D005581 8.9e-79 298.9 399 71.9
Lj1P662T20 Lonicera japonica HOM05D004783 ORTHO05D005581 3.4e-70 270.4 396 68.9
MD05G1041400 Malus domestica HOM05D004783 ORTHO05D005581 3.4e-70 270.4 376 73.7
Dinv06816 Davidia involucrata HOM05D004783 ORTHO05D005581 4.4e-70 270.0 396 69.4
CSS0049259 Camellia sinensis var. sinensis HOM05D004783 ORTHO05D005581 9.9e-70 268.9 393 68.4
Haze_23534 Corylus avellana HOM05D004783 ORTHO05D005581 1.3e-69 268.5 422 60.4
Hma1.2p1_0057F.1_g032040 Hydrangea macrophylla HOM05D004783 ORTHO05D005581 2.2e-69 267.7 443 64.1
CSS0029611 Camellia sinensis var. sinensis HOM05D004783 ORTHO05D005581 3.8e-69 266.9 393 67.9
CSS0039136 Camellia sinensis var. sinensis HOM05D004783 ORTHO05D005581 3.8e-69 266.9 393 67.9
Actinidia24491 Actinidia chinensis HOM05D004783 ORTHO05D005581 7.1e-68 262.7 396 68.9
Cfa010144 Carpinus fangiana HOM05D004783 ORTHO05D005581 2.7e-67 260.8 422 59.5
CiPaw.13G145000 Carya illinoinensis HOM05D004783 ORTHO05D005581 3.5e-67 260.4 396 58.3
QL02p039304 Quercus lobata HOM05D004783 ORTHO05D005581 6.0e-67 259.6 396 67.9
Atru.chr9.109 Acer truncatum HOM05D004783 ORTHO05D005581 7.8e-67 259.2 391 59.6
Sc10g0000400 Simmondsia chinensis HOM05D004783 ORTHO05D005581 3.0e-66 257.3 402 67.2
Atru.BG.182.p Acer truncatum HOM05D004783 ORTHO05D005581 8.7e-66 255.8 391 57.8
Thecc.04G015500 Theobroma cacao HOM05D004783 ORTHO05D005581 2.5e-65 254.2 413 65.4
Cpa.g.c26548.5 Carica papaya HOM05D004783 ORTHO05D005581 2.9e-61 240.7 396 65.9
QL03p008874 Quercus lobata HOM05D004783 ORTHO05D005581 6.4e-61 239.6 407 36.9
Nn2g14491 Nelumbo nucifera HOM05D004783 ORTHO05D005581 1.1e-60 238.8 424 35.1
TWI75G1155 Tripterygium wilfordii HOM05D004783 ORTHO05D005581 1.1e-60 238.8 394 53.3
Peaxi162Scf00315g00041 Petunia axillaris HOM05D004783 ORTHO05D005581 3.2e-60 237.3 396 51.8
Sopen07g021630 Solanum pennellii HOM05D004783 ORTHO05D005581 9.3e-60 235.7 396 47.2
Rhsim01G0260800 Rhododendron simsii HOM05D004783 ORTHO05D005581 1.2e-59 235.3 393 67.2
PGSC0003DMG400027882 Solanum tuberosum HOM05D004783 ORTHO05D005581 3.5e-59 233.8 396 47.2
EL10Ac2g04386 Beta vulgaris HOM05D004783 ORTHO05D005581 4.6e-59 233.4 445 60.2
Gorai.012G085500 Gossypium raimondii HOM05D004783 ORTHO05D005581 7.9e-59 232.6 396 34.1
Nitab4.5_0003308g0060 Nicotiana tabacum HOM05D004783 ORTHO05D005581 7.9e-59 232.6 396 47.5
Ciclev10024609m.g Citrus clementina HOM05D004783 ORTHO05D005581 1.8e-58 231.5 396 61.1
Solyc07g042030.2 Solanum lycopersicum HOM05D004783 ORTHO05D005581 2.3e-58 231.1 396 47.0
Gohir.D04G075700 Gossypium hirsutum HOM05D004783 ORTHO05D005581 5.1e-58 229.9 396 33.6
TAR622G0302 Trochodendron aralioides HOM05D004783 ORTHO05D005581 5.1e-58 229.9 376 67.6
TAR622G0815 Trochodendron aralioides HOM05D004783 ORTHO05D005581 5.1e-58 229.9 376 67.6
Gohir.A05G337100 Gossypium hirsutum HOM05D004783 ORTHO05D005581 6.7e-58 229.6 396 33.6
MD10G1047800 Malus domestica HOM05D004783 ORTHO05D005581 8.7e-58 229.2 354 64.4
CAN.G147.12 Capsicum annuum HOM05D004783 ORTHO05D005581 1.1e-57 228.8 396 34.8
Gohir.A02G106600 Gossypium hirsutum HOM05D004783 ORTHO05D005581 1.1e-57 228.8 413 33.4
MSTRG.26477 Avicennia marina HOM05D004783 ORTHO05D005581 7.4e-57 226.1 397 64.7
AUR62023108 Chenopodium quinoa HOM05D004783 ORTHO05D005581 1.3e-56 225.3 421 59.9
Eucgr.J00651 Eucalyptus grandis HOM05D004783 ORTHO05D005581 1.6e-56 224.9 396 44.9
AUR62009429 Chenopodium quinoa HOM05D004783 ORTHO05D005581 3.6e-56 223.8 393 62.6
MBI04_g31965_MAGBIO Magnolia biondii HOM05D004783 ORTHO05D005581 1.5e-54 218.4 421 60.6
Lsat_1_v5_gn_4_139241 Lactuca sativa HOM05D004783 ORTHO05D005581 2.6e-54 217.6 398 34.9
COL.COLO4_29903 Corchorus olitorius HOM05D004783 ORTHO05D005581 1.3e-53 215.3 414 55.3
CsaV3_2G007350 Cucumis sativus L. HOM05D004783 ORTHO05D005581 1.3e-53 215.3 426 54.7
ECA232G0714 Erigeron canadensis HOM05D004783 ORTHO05D005581 1.4e-52 211.8 396 33.6
TWI79G0945 Tripterygium wilfordii HOM05D004783 ORTHO05D005581 1.9e-52 211.5 399 50.1
Migut.L01576 Erythranthe guttata HOM05D004783 ORTHO05D005581 7.1e-52 209.5 397 63.0
Lsat_1_v5_gn_4_139140 Lactuca sativa HOM05D004783 ORTHO05D005581 4.6e-51 206.8 398 33.2
Sabra01G0174200 Salix brachista HOM05D004783 ORTHO05D005581 6.0e-51 206.5 402 53.2
FAN26G1702 Fragaria x ananassa HOM05D004783 ORTHO05D005581 7.9e-51 206.1 105 99.0
HanXRQChr15g0495131 Helianthus annuus HOM05D004783 ORTHO05D005581 5.1e-50 203.4 400 33.0
Ah.16g100720 Amaranthus hybridus HOM05D004783 ORTHO05D005581 5.6e-49 199.9 424 58.7
Oeu062248.1 Olea europaea HOM05D004783 ORTHO05D005581 7.4e-49 199.5 401 62.8
Cc06_g12410 Coffea canephora HOM05D004783 ORTHO05D005581 4.8e-48 196.8 202 50.0
Migut.J00915 Erythranthe guttata HOM05D004783 ORTHO05D005581 1.4e-47 195.3 397 62.5
Potri.004G229100 Populus trichocarpa HOM05D004783 ORTHO05D005581 1.4e-47 195.3 404 52.0
PGR119G2361 Punica granatum HOM05D004783 ORTHO05D005581 3.1e-47 194.1 420 39.0
FAN26G3132 Fragaria x ananassa HOM05D004783 ORTHO05D005581 9.0e-47 192.6 97 100.0
FAN15G3186 Fragaria x ananassa HOM05D011862 ORTHO05D014222 1.5e-46 191.8 100 99.0
FAN16G2906 Fragaria x ananassa HOM05D011862 ORTHO05D014222 7.6e-46 189.5 100 98.0
FAN20G1978 Fragaria x ananassa HOM05D011862 ORTHO05D014222 1.3e-45 188.7 100 98.0
CANSAT56G4335 Cannabis sativa HOM05D004783 ORTHO05D005581 6.5e-45 186.4 396 60.4
Glyma.02G276200 Glycine max HOM05D004783 ORTHO05D005581 4.2e-44 183.7 396 54.0
SalBow6G2874 Salvia bowleyana HOM05D004783 ORTHO05D005581 3.5e-43 180.6 400 31.2
Lalb_Chr04g0249471 Lupinus albus HOM05D004783 ORTHO05D005581 1.8e-42 178.3 422 47.6
Glyma.14G039600 Glycine max HOM05D004783 ORTHO05D005581 5.1e-42 176.8 396 30.3
LjContig00564g0007311 Lotus japonicus HOM05D004783 ORTHO05D005581 5.1e-42 176.8 393 50.6
Sed0014805 Sechium edule HOM05D004783 ORTHO05D005581 8.7e-42 176.0 426 56.6
Lj4g0006774 Lotus japonicus HOM05D004783 ORTHO05D005581 5.7e-41 173.3 393 52.4
Psat2g021520 Pisum sativum HOM05D004783 ORTHO05D005581 2.1e-40 171.4 414 51.0
FAN09G0480 Fragaria x ananassa HOM05D004783 ORTHO05D005581 3.7e-40 170.6 87 98.9
SGA_v2.0_scaffold296G47545 Striga asiatica HOM05D004783 ORTHO05D005581 1.1e-39 169.1 440 43.0
Carub.0002s1809 Capsella rubella HOM05D004783 ORTHO05D005581 2.4e-39 167.9 433 44.3
SGA_v2.0_scaffold21G09513 Striga asiatica HOM05D004783 ORTHO05D005581 4.1e-39 167.2 415 57.1
FAN05G3696 Fragaria x ananassa HOM05D004783 ORTHO05D005581 5.3e-39 166.8 85 98.8
Phvul.008G205300 Phaseolus vulgaris HOM05D004783 ORTHO05D005581 5.3e-39 166.8 396 27.8
MBI04_g31977_MAGBIO Magnolia biondii HOM05D004783 ORTHO05D005581 1.2e-38 165.6 183 47.5
Os02g0127600 Oryza sativa ssp. japonica HOM05D004783 ORTHO05D005581 2.0e-38 164.9 418 51.2
TPR.G14625 Trifolium pratense HOM05D004783 ORTHO05D005581 2.0e-38 164.9 410 58.8
THA.LOC104800219 Tarenaya hassleriana HOM05D004783 ORTHO05D005581 4.5e-38 163.7 397 29.7
VMungo0647G1136 Vigna mungo HOM05D004783 ORTHO05D005581 6.5e-37 159.8 421 27.1
CARHR064510 Cardamine hirsuta HOM05D004783 ORTHO05D005581 1.9e-36 158.3 203 43.8
TPR.G11801 Trifolium pratense HOM05D004783 ORTHO05D005581 7.2e-36 156.4 414 50.7
AL2G30824 Arabidopsis lyrata HOM05D004783 ORTHO05D005581 9.3e-36 156.0 394 37.6
Thhalv10018115m.g Eutrema salsugineum HOM05D004783 ORTHO05D005581 9.3e-36 156.0 393 47.3
Aa31LG4G9300 Aethionema arabicum HOM05D004783 ORTHO05D005581 6.1e-35 153.3 394 43.4
ATR0605G071 Amborella trichopoda HOM05D004783 ORTHO05D005581 7.9e-35 152.9 393 46.1
Medtr5g088510 Medicago truncatula HOM05D004783 ORTHO05D005581 4.3e-33 147.1 394 29.4
Ah.10g038540 Amaranthus hybridus HOM05D001978 ORTHO05D003036 5.7e-33 146.7 168 45.8
BcaB03g14878 Brassica carinata HOM05D004783 ORTHO05D005581 5.7e-33 146.7 201 41.8
Medtr5g088490 Medicago truncatula HOM05D004783 ORTHO05D005581 5.7e-33 146.7 399 50.1
DCAR_019962 Daucus carota HOM05D004783 ORTHO05D005581 2.2e-32 144.8 165 44.8
AT1G71210 Arabidopsis thaliana HOM05D004783 ORTHO05D005581 3.7e-32 144.1 394 41.9
arahy.Tifrunner.gnm1.ann1.6TK8TS Arachis hypogaea HOM05D004783 ORTHO05D005581 3.7e-32 144.1 229 36.2
Sp5g26370 Schrenkiella parvula HOM05D004783 ORTHO05D005581 6.3e-32 143.3 201 40.8
Ca_06171_v3 Cicer arietinum L. HOM05D004783 ORTHO05D005581 1.4e-31 142.1 371 58.8
CDE02G3572 Ceratophyllum demersum HOM05D004783 ORTHO05D005581 1.8e-31 141.7 385 42.1
arahy.Tifrunner.gnm1.ann1.7R7ZTH Arachis hypogaea HOM05D004783 ORTHO05D005581 3.1e-31 141.0 229 35.8
arahy.Tifrunner.gnm1.ann1.IFYB19 Arachis hypogaea HOM05D004783 ORTHO05D005581 4.1e-31 140.6 203 38.4
Gorai.003G087500 Gossypium raimondii HOM05D004783 ORTHO05D005581 1.5e-30 138.7 413 43.3
A07p37560 Brassica napus HOM05D004783 ORTHO05D005581 2.6e-30 137.9 394 45.4
C06p45300 Brassica napus HOM05D004783 ORTHO05D005581 2.6e-30 137.9 394 44.4
BraA07t31317Z Brassica rapa HOM05D004783 ORTHO05D005581 2.6e-30 137.9 394 40.4
arahy.Tifrunner.gnm1.ann1.U93Q4L Arachis hypogaea HOM05D004783 ORTHO05D005581 4.5e-30 137.1 229 34.9
Gohir.D03G072203 Gossypium hirsutum HOM05D004783 ORTHO05D005581 2.2e-29 134.8 413 41.2
SEGI_26474 Sequoiadendron giganteum HOM05D004783 ORTHO05D005581 3.8e-29 134.0 181 36.5
Zm00001eb231010 Zea mays HOM05D004783 ORTHO05D005581 5.0e-29 133.7 190 37.4
SEGI_02727 Sequoiadendron giganteum HOM05D004783 ORTHO05D005581 8.5e-29 132.9 203 37.4
PSO198G0081 Papaver somniferum HOM05D004783 ORTHO05D005581 1.2e-27 129.0 414 25.6
ECA234G4279 Erigeron canadensis HOM05D004783 ORTHO05D005581 7.9e-27 126.3 398 47.0
Potri.003G000701 Populus trichocarpa HOM05D004783 ORTHO05D005581 2.3e-26 124.8 139 43.2
arahy.Tifrunner.gnm1.ann1.Z9P42K Arachis hypogaea HOM05D004783 ORTHO05D005581 3.9e-26 124.0 194 36.6
arahy.Tifrunner.gnm1.ann1.I0AKGU Arachis hypogaea HOM05D004783 ORTHO05D005581 1.5e-25 122.1 194 36.1
SHI25070 Sapria himalayana HOM05D004783 ORTHO05D005581 1.3e-24 119.0 124 46.8
CDE09G0275 Ceratophyllum demersum HOM05D004783 ORTHO05D005581 2.2e-24 118.2 379 40.1
arahy.Tifrunner.gnm1.ann1.EB1NGP Arachis hypogaea HOM05D004783 ORTHO05D005581 1.4e-23 115.5 211 33.6
Manes.02G133800 Manihot esculenta HOM05D004783 ORTHO05D005581 1.4e-23 115.5 105 51.4
HPP92_028304 Vanilla planifolia HOM05D004783 ORTHO05D005581 4.5e-22 110.5 185 36.2
Manes.01G175200 Manihot esculenta HOM05D004783 ORTHO05D005581 1.4e-20 105.5 96 53.1
FAN18G1946 Fragaria x ananassa HOM05D004783 ORTHO05D005581 1.4e-18 99.0 47 100.0
CDE12G0310 Ceratophyllum demersum HOM05D004783 ORTHO05D005581 1.8e-18 98.6 156 37.8
FAN09G4036 Fragaria x ananassa HOM05D004783 ORTHO05D005581 5.2e-18 97.1 47 97.9
PSO063G6404 Papaver somniferum HOM05D004783 ORTHO05D005581 5.7e-17 93.6 414 22.7
COL.COLO4_04586 Corchorus olitorius HOM05D004783 ORTHO05D005581 3.1e-15 87.8 101 41.6
BolC6t39583H Brassica oleracea HOM05D004783 ORTHO05D005581 5.3e-15 87.0 322 46.3
DCAR_003089 Daucus carota HOM05D004783 ORTHO05D005581 2.6e-14 84.7 123 39.0
arahy.Tifrunner.gnm1.ann1.6847YK Arachis hypogaea HOM05D004783 ORTHO05D005581 7.7e-14 83.2 157 31.8
MBI04_g31976_MAGBIO Magnolia biondii HOM05D004783 ORTHO05D005581 7.2e-12 76.6 72 52.8
CAN.G986.33 Capsicum annuum HOM05D004783 ORTHO05D005581 2.2e-08 65.1 139 30.9
SGA_v2.0_scaffold80G25712 Striga asiatica HOM05D000897 ORTHO05D000716 3.1e-07 61.2 46 63.0
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 1.6e-06 58.9 172 25.0
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 2.7e-06 58.2 180 27.8
BolC6t39586H Brassica oleracea HOM05D004783 ORTHO05D005581 3.5e-06 57.8 72 45.8
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 4.5e-06 57.4 241 20.7
Cpa.g.sc78.82 Carica papaya HOM05D003689 ORTHO05D003950 5.9e-06 57.0 103 32.0
Potri.003G000601 Populus trichocarpa HOM05D004783 ORTHO05D005581 7.7e-06 56.6 78 38.5


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