Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G1619 Fragaria x ananassa HOM05D007153 ORTHO05D008769 1.3e-64 249.6 130 100.0
FAN11G0553 Fragaria x ananassa HOM05D007153 ORTHO05D008769 1.9e-63 245.7 130 99.2
FvH4_3g17350 Fragaria vesca HOM05D007153 ORTHO05D008769 1.8e-61 239.2 125 98.4
FAN25G3240 Fragaria x ananassa HOM05D007153 ORTHO05D008769 6.8e-61 237.3 128 95.3
RcHm_v2.0_Chr5g0028871 Rosa chinensis HOM05D007153 ORTHO05D008769 5.0e-56 221.1 128 90.6
Prupe.4G153500 Prunus persica HOM05D007153 ORTHO05D008769 6.8e-53 210.7 128 83.6
MD03G1252100 Malus domestica HOM05D007153 ORTHO05D008769 2.0e-52 209.1 128 83.6
MD11G1273600 Malus domestica HOM05D007153 ORTHO05D008769 9.8e-52 206.8 128 82.8
ClCG11G017050 Citrullus lanatus HOM05D007153 ORTHO05D008769 1.8e-50 202.6 129 78.3
Sabra11G0083600 Salix brachista HOM05D007153 ORTHO05D008769 2.4e-50 202.2 128 78.9
CsaV3_4G032710 Cucumis sativus L. HOM05D007153 ORTHO05D008769 4.1e-50 201.4 129 79.1
Ciclev10021578m.g Citrus clementina HOM05D007153 ORTHO05D008769 7.0e-50 200.7 128 79.7
MELO3C016680.2 Cucumis melo HOM05D007153 ORTHO05D008769 7.0e-50 200.7 129 79.8
Thecc.07G140300 Theobroma cacao HOM05D007153 ORTHO05D008769 2.0e-49 199.1 128 76.6
COL.COLO4_17448 Corchorus olitorius HOM05D007153 ORTHO05D008769 2.7e-49 198.7 128 76.6
PSO832G0017 Papaver somniferum HOM05D007153 ORTHO05D008769 2.7e-49 198.7 128 78.1
MBI07_g07830_MAGBIO Magnolia biondii HOM05D007153 ORTHO05D008769 3.5e-49 198.4 128 76.6
CiPaw.11G154200 Carya illinoinensis HOM05D007153 ORTHO05D008769 5.9e-49 197.6 128 77.3
Atru.chr2.1920 Acer truncatum HOM05D007153 ORTHO05D008769 7.8e-49 197.2 129 79.1
Eucgr.F01378 Eucalyptus grandis HOM05D007153 ORTHO05D008769 7.8e-49 197.2 128 78.1
Gohir.D13G155400 Gossypium hirsutum HOM05D007153 ORTHO05D008769 1.3e-48 196.4 124 78.2
Sed0027291 Sechium edule HOM05D007153 ORTHO05D008769 1.3e-48 196.4 128 78.1
Rhsim06G0187600 Rhododendron simsii HOM05D007153 ORTHO05D008769 1.7e-48 196.1 128 76.6
Gorai.013G176000 Gossypium raimondii HOM05D007153 ORTHO05D008769 2.9e-48 195.3 124 78.2
GSVIVG01014069001 Vitis vinifera HOM05D007153 ORTHO05D008769 2.9e-48 195.3 128 76.6
Duzib213G0031 Durio zibethinus HOM05D007153 ORTHO05D008769 5.0e-48 194.5 128 75.8
CSS0012595 Camellia sinensis var. sinensis HOM05D007153 ORTHO05D008769 8.6e-48 193.7 128 76.6
CANSAT56G2533 Cannabis sativa HOM05D007153 ORTHO05D008769 8.6e-48 193.7 128 74.2
Potri.011G101800 Populus trichocarpa HOM05D007153 ORTHO05D008769 1.5e-47 193.0 128 75.8
Sc03g0010790 Simmondsia chinensis HOM05D007153 ORTHO05D008769 2.5e-47 192.2 128 72.7
Atru.chr2.1917 Acer truncatum HOM05D007153 ORTHO05D008769 3.3e-47 191.8 121 79.3
Haze_08464 Corylus avellana HOM05D007153 ORTHO05D008769 3.3e-47 191.8 128 75.0
PSO063G3995 Papaver somniferum HOM05D007153 ORTHO05D008769 3.3e-47 191.8 128 75.0
TWI38G0031 Tripterygium wilfordii HOM05D007153 ORTHO05D008769 3.3e-47 191.8 126 77.0
DCAR_017582 Daucus carota HOM05D007153 ORTHO05D008769 7.3e-47 190.7 129 75.2
Dinv26693 Davidia involucrata HOM05D007153 ORTHO05D008769 7.3e-47 190.7 129 75.2
vmacro11989 Vaccinium macrocarpon HOM05D007153 ORTHO05D008769 1.6e-46 189.5 128 73.4
QL08p027831 Quercus lobata HOM05D007153 ORTHO05D008769 2.8e-46 188.7 127 73.2
Cfa019490 Carpinus fangiana HOM05D007153 ORTHO05D008769 4.7e-46 188.0 128 75.0
Ah.06g187590 Amaranthus hybridus HOM05D007153 ORTHO05D008769 1.0e-45 186.8 120 75.8
TPR.G6902 Trifolium pratense HOM05D007153 ORTHO05D008769 1.0e-45 186.8 128 73.4
Cc05_g10530 Coffea canephora HOM05D007153 ORTHO05D008769 1.4e-45 186.4 126 74.6
Lsat_1_v5_gn_7_100481 Lactuca sativa HOM05D007153 ORTHO05D008769 1.4e-45 186.4 127 70.9
ECA236G0620 Erigeron canadensis HOM05D007153 ORTHO05D008769 2.3e-45 185.7 129 71.3
Lj1A822T45 Lonicera japonica HOM05D007153 ORTHO05D008769 2.3e-45 185.7 125 74.4
Hund10387 Selenicereus undatus HOM05D007153 ORTHO05D008769 3.1e-45 185.3 120 76.7
THA.LOC104810421 Tarenaya hassleriana HOM05D007153 ORTHO05D008769 3.1e-45 185.3 122 76.2
Cpa.g.sc77.72 Carica papaya HOM05D007153 ORTHO05D008769 5.2e-45 184.5 128 73.4
Cc00_g00040 Coffea canephora HOM05D007153 ORTHO05D008769 5.2e-45 184.5 125 74.4
Ca_03417_v3 Cicer arietinum L. HOM05D007153 ORTHO05D008769 6.8e-45 184.1 128 71.9
Ca_29738_v3 Cicer arietinum L. HOM05D007153 ORTHO05D008769 6.8e-45 184.1 128 71.9
Migut.H02033 Erythranthe guttata HOM05D007153 ORTHO05D008769 8.9e-45 183.7 128 71.1
PGR083G2631 Punica granatum HOM05D007153 ORTHO05D008769 8.9e-45 183.7 122 77.0
Solyc07g062030.3 Solanum lycopersicum HOM05D007153 ORTHO05D008769 8.9e-45 183.7 128 74.2
Sopen07g030290 Solanum pennellii HOM05D007153 ORTHO05D008769 8.9e-45 183.7 128 74.2
AUR62019681 Chenopodium quinoa HOM05D007153 ORTHO05D008769 1.2e-44 183.3 120 75.8
Psat1g008400 Pisum sativum HOM05D007153 ORTHO05D008769 1.2e-44 183.3 128 71.9
CAN.G375.63 Capsicum annuum HOM05D007153 ORTHO05D008769 1.5e-44 183.0 128 73.4
Lj3g0020060 Lotus japonicus HOM05D007153 ORTHO05D008769 1.5e-44 183.0 128 72.7
Nn3g20646 Nelumbo nucifera HOM05D007153 ORTHO05D008769 1.5e-44 183.0 125 74.4
PGSC0003DMG400007056 Solanum tuberosum HOM05D007153 ORTHO05D008769 1.5e-44 183.0 128 72.7
Hma1.2p1_0713F.1_g207790 Hydrangea macrophylla HOM05D007153 ORTHO05D008769 2.0e-44 182.6 126 71.4
Lalb_Chr01g0016241 Lupinus albus HOM05D007153 ORTHO05D008769 2.0e-44 182.6 122 76.2
Medtr2g072510 Medicago truncatula HOM05D007153 ORTHO05D008769 2.6e-44 182.2 128 71.1
AUR62039568 Chenopodium quinoa HOM05D007153 ORTHO05D008769 9.8e-44 180.3 120 74.2
Nitab4.5_0001140g0070 Nicotiana tabacum HOM05D007153 ORTHO05D008769 9.8e-44 180.3 127 70.9
Phvul.005G064500 Phaseolus vulgaris HOM05D007153 ORTHO05D008769 9.8e-44 180.3 128 72.7
Glyma.15G242900 Glycine max HOM05D007153 ORTHO05D008769 1.3e-43 179.9 128 71.1
HanXRQChr15g0495311 Helianthus annuus HOM05D007153 ORTHO05D008769 1.7e-43 179.5 128 68.8
SGA_v2.0_scaffold130G34251 Striga asiatica HOM05D007153 ORTHO05D008769 1.7e-43 179.5 128 71.1
Aqoxy1G01815 Aquilegia oxysepala HOM05D007153 ORTHO05D008769 2.9e-43 178.7 128 67.2
arahy.Tifrunner.gnm1.ann1.57A972 Arachis hypogaea HOM05D007153 ORTHO05D008769 2.9e-43 178.7 122 76.2
AL1G62070 Arabidopsis lyrata HOM05D007153 ORTHO05D008769 6.4e-43 177.6 126 71.4
A06p00970 Brassica napus HOM05D007153 ORTHO05D008769 6.4e-43 177.6 123 72.4
Glyma.13G262500 Glycine max HOM05D007153 ORTHO05D008769 6.4e-43 177.6 128 71.1
Nitab4.5_0003618g0090 Nicotiana tabacum HOM05D007153 ORTHO05D008769 6.4e-43 177.6 127 70.9
Peaxi162Scf00111g01220 Petunia axillaris HOM05D007153 ORTHO05D008769 1.1e-42 176.8 129 69.0
AT1G53520 Arabidopsis thaliana HOM05D007153 ORTHO05D008769 1.9e-42 176.0 126 69.8
MSTRG.14258 Avicennia marina HOM05D007153 ORTHO05D008769 1.9e-42 176.0 128 71.9
EL10Ac4g08449 Beta vulgaris HOM05D007153 ORTHO05D008769 2.4e-42 175.6 127 68.5
VMungo1080G0806 Vigna mungo HOM05D007153 ORTHO05D008769 4.1e-42 174.9 128 69.5
C06p09270 Brassica napus HOM05D007153 ORTHO05D008769 5.4e-42 174.5 123 69.9
Sp1g40050 Schrenkiella parvula HOM05D007153 ORTHO05D008769 5.4e-42 174.5 123 69.9
Carub.0001s4270 Capsella rubella HOM05D007153 ORTHO05D008769 9.2e-42 173.7 121 71.1
BcaC08g43538 Brassica carinata HOM05D007153 ORTHO05D008769 1.2e-41 173.3 123 69.1
BolC6t36005H Brassica oleracea HOM05D007153 ORTHO05D008769 1.2e-41 173.3 123 69.1
Phvul.005G064600 Phaseolus vulgaris HOM05D007153 ORTHO05D008769 1.2e-41 173.3 121 73.6
arahy.Tifrunner.gnm1.ann1.C8MR0W Arachis hypogaea HOM05D007153 ORTHO05D008769 2.0e-41 172.6 122 74.6
BraA06t23324Z Brassica rapa HOM05D007153 ORTHO05D008769 2.7e-41 172.2 123 70.7
unitig_747.g21594 Utricularia gibba HOM05D007153 ORTHO05D008769 2.7e-41 172.2 128 68.8
CARHR043760 Cardamine hirsuta HOM05D007153 ORTHO05D008769 1.3e-40 169.9 126 67.5
BcaB07g33323 Brassica carinata HOM05D007153 ORTHO05D008769 2.3e-40 169.1 123 69.1
Thhalv10011696m.g Eutrema salsugineum HOM05D007153 ORTHO05D008769 1.1e-39 166.8 122 68.9
Aa31LG10G1690 Aethionema arabicum HOM05D007153 ORTHO05D008769 1.2e-38 163.3 117 70.1
CDE04G0295 Ceratophyllum demersum HOM05D007153 ORTHO05D008769 1.9e-34 149.4 97 75.3
Potri.001G380700 Populus trichocarpa HOM05D007153 ORTHO05D008769 1.1e-31 140.2 104 72.1
Os02g0320300 Oryza sativa ssp. japonica HOM05D007153 ORTHO05D008769 6.2e-30 134.4 126 55.6
Zm00001eb238460 Zea mays HOM05D007153 ORTHO05D008769 2.2e-27 125.9 126 53.2
Manes.15G100200 Manihot esculenta HOM05D007153 ORTHO05D008769 1.9e-26 122.9 77 79.2
Mapoly0077s0003 Marchantia polymorpha HOM05D007153 ORTHO05D008769 7.8e-25 117.5 128 48.4
Mapoly0044s0117 Marchantia polymorpha HOM05D007153 ORTHO05D008769 4.3e-23 111.7 129 45.7
Sabra11G0085100 Salix brachista HOM05D007153 ORTHO05D008769 8.1e-22 107.5 102 61.8
Pp3c10_20100 Physcomitrium patens HOM05D007153 ORTHO05D008769 1.7e-19 99.8 125 44.8
SMO147G0119 Selaginella moellendorffii HOM05D007153 ORTHO05D008769 1.9e-18 96.3 116 44.0
MCO15G144 Micromonas commoda HOM05D007153 ORTHO05D008769 1.2e-09 67.0 146 30.8
AagrBONN_evm.TU.Sc2ySwM_228.3568 Anthoceros agrestis HOM05D007153 ORTHO05D008769 1.6e-09 66.6 82 40.2
Pp3c26_4040 Physcomitrium patens HOM05D006808 ORTHO05D008610 1.6e-09 66.6 126 31.0
Sabra11G0084000 Salix brachista HOM05D000002 ORTHO05D001134 2.1e-09 66.2 51 64.7
Cre01.g007600 Chlamydomonas reinhardtii HOM05D007153 ORTHO05D008769 6.0e-09 64.7 129 33.3
Pp3c4_25770 Physcomitrium patens HOM05D006808 ORTHO05D008610 1.3e-08 63.5 126 28.6
ATR0759G079 Amborella trichopoda HOM05D003362 ORTHO05D003783 8.7e-08 60.8 132 32.6
Cre12.g517100 Chlamydomonas reinhardtii HOM05D007153 ORTHO05D008769 1.6e-06 56.6 132 28.8
PRCOL_00005489 Prasinoderma coloniale HOM05D007153 ORTHO05D008769 2.1e-06 56.2 138 31.9
Glyma.10G292200 Glycine max HOM05D003362 ORTHO05D003783 8.1e-06 54.3 131 26.7


User provided reference genes

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