Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 6.2e-280 966.8 502 100.0
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.7e-240 835.9 502 89.4
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 7.2e-228 793.9 502 85.9
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.0e-226 788.1 502 86.1
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 8.3e-200 700.7 503 76.5
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 1.1e-154 550.8 376 82.7
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 4.4e-124 449.1 507 55.8
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 3.3e-87 326.6 382 56.0
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.9e-83 313.5 473 47.6
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 4.3e-79 299.7 445 47.2
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 8.1e-78 295.4 464 45.9
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 3.1e-77 293.5 452 46.0
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 6.0e-73 279.3 445 46.5
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.3e-72 278.1 384 48.4
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 3.0e-72 276.9 442 44.6
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 6.6e-72 275.8 460 44.1
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.9e-71 274.2 422 46.4
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 5.3e-69 266.2 439 43.7
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 2.2e-67 260.8 433 42.7
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 7.1e-66 255.8 472 40.9
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 9.3e-66 255.4 439 42.4
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 2.1e-65 254.2 432 41.9
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 3.6e-62 243.4 431 42.5
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 2.2e-59 234.2 358 45.5
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 2.9e-59 233.8 436 41.3
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 1.1e-58 231.9 449 40.3
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.9e-58 231.1 441 41.0
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.2e-57 228.4 463 39.5
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 1.0e-56 225.3 463 38.2
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 1.3e-56 224.9 424 40.8
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 8.7e-56 222.2 437 40.7
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 3.3e-55 220.3 398 41.2
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 2.8e-54 217.2 432 41.9
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.4e-53 214.2 434 39.4
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 4.5e-52 209.9 346 43.1
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 3.5e-49 200.3 438 39.5
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 2.8e-46 190.7 379 43.0
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 8.2e-46 189.1 442 37.6
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 1.8e-45 188.0 470 34.0
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 2.2e-43 181.0 398 36.9
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 9.3e-42 175.6 453 37.3
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 3.5e-41 173.7 485 34.2
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 6.3e-38 162.9 444 35.6
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 1.8e-37 161.4 425 37.4
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.2e-36 158.7 470 33.0
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 5.9e-36 156.4 380 34.7
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 2.2e-35 154.5 390 36.4
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 2.5e-34 151.0 483 32.5
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 4.6e-33 146.7 387 33.6
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.1e-31 142.1 430 35.6
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 3.3e-31 140.6 467 32.8
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 2.8e-30 137.5 390 36.2
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 3.7e-30 137.1 409 34.5
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 1.1e-29 135.6 260 38.5
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 2.4e-29 134.4 317 35.0
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 2.0e-28 131.3 389 33.7
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 1.1e-26 125.6 466 29.8
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.9e-26 124.8 361 33.8
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.9e-26 124.8 380 33.2
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 5.5e-26 123.2 299 36.5
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 5.5e-26 123.2 382 31.9
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 7.2e-26 122.9 254 37.8
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 3.0e-24 117.5 498 27.7
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 5.1e-24 116.7 362 33.1
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 5.1e-24 116.7 449 30.1
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 8.8e-24 115.9 480 28.3
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 8.8e-24 115.9 480 29.6
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 2.0e-23 114.8 295 36.6
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 1.4e-21 108.6 303 35.0
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 1.8e-21 108.2 251 37.5
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 3.5e-20 104.0 488 29.5
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 2.7e-17 94.4 414 29.2
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 2.7e-17 94.4 301 34.6
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 2.7e-17 94.4 301 34.6
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 2.8e-14 84.3 347 29.4
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 3.1e-13 80.9 282 30.5
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 1.6e-12 78.6 459 24.6
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 5.9e-12 76.6 99 45.5
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 1.8e-08 65.1 107 39.3


User provided reference genes

Program Settings