Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 6.9e-294 1013.4 600 100.0
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 8.0e-274 946.8 610 93.9
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.0e-273 946.4 610 92.1
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 2.3e-252 875.5 613 87.8
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.0e-232 809.3 485 91.8
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 2.6e-147 526.6 619 62.7
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 1.3e-122 444.5 623 57.5
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 3.8e-114 416.4 489 55.6
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 8.4e-114 415.2 605 53.1
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 6.3e-69 266.2 563 41.0
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 6.9e-68 262.7 566 41.2
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 1.4e-60 238.4 646 39.8
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 3.8e-58 230.3 493 42.6
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 6.7e-55 219.5 566 41.5
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 1.1e-54 218.8 590 40.7
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 4.4e-54 216.9 590 40.5
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 3.7e-53 213.8 637 44.0
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 4.8e-53 213.4 648 38.4
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 1.8e-52 211.5 684 37.9
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 4.1e-52 210.3 647 36.5
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.7e-45 188.3 584 35.1
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 3.7e-45 187.2 498 38.0
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 1.6e-43 181.8 547 34.6
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 1.1e-41 175.6 632 32.6
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 1.5e-41 175.3 636 34.7
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 1.2e-40 172.2 709 34.6
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 1.0e-39 169.1 423 38.5
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 4.0e-39 167.2 659 32.8
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 5.2e-39 166.8 599 31.6
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 3.4e-38 164.1 610 33.6
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 9.8e-38 162.5 605 35.0
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 1.7e-37 161.8 573 37.2
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 1.8e-36 158.3 696 32.2
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 1.6e-35 155.2 663 30.5
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 3.5e-35 154.1 599 32.1
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 1.0e-34 152.5 560 34.8
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 3.8e-34 150.6 553 37.1
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 1.1e-33 149.1 512 34.6
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 5.5e-33 146.7 573 33.0
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 7.2e-33 146.4 477 31.4
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 1.2e-32 145.6 624 33.3
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 1.6e-32 145.2 490 34.7
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 3.6e-32 144.1 549 33.5
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 1.0e-31 142.5 572 32.0
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 1.8e-31 141.7 707 34.1
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 5.2e-31 140.2 509 32.2
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 1.5e-30 138.7 634 33.4
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 9.8e-30 136.0 556 31.3
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 2.9e-29 134.4 405 34.3
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 1.6e-27 128.6 431 33.9
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 2.0e-27 128.3 613 35.4
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 1.7e-26 125.2 553 30.9
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 2.5e-25 121.3 458 34.3
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 2.8e-24 117.9 433 32.6
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 8.0e-24 116.3 588 32.7
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 1.5e-22 112.1 372 34.1
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 3.4e-22 110.9 487 30.6
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 3.7e-21 107.5 449 31.2
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 8.3e-21 106.3 497 30.6
MELO3C025606.2 Cucumis melo HOM05D007892 ORTHO05D009211 1.9e-20 105.1 558 30.8
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 3.2e-20 104.4 720 29.7
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 3.2e-20 104.4 547 33.3
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 6.0e-19 100.1 501 30.1
Psat0s3104g0160 Pisum sativum HOM05D007892 ORTHO05D009211 2.3e-18 98.2 460 30.2
EL10Ac4g08232 Beta vulgaris HOM05D007892 ORTHO05D009211 1.5e-17 95.5 442 32.1
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 3.6e-16 90.9 352 30.1
Ah.06g184550 Amaranthus hybridus HOM05D007892 ORTHO05D009211 8.1e-16 89.7 449 30.3
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 8.1e-16 89.7 582 28.4
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.1e-15 89.4 631 32.0
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 6.8e-15 86.7 180 40.0
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 1.2e-14 85.9 479 29.0
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 2.0e-14 85.1 576 27.8
Migut.M00782 Erythranthe guttata HOM05D007892 ORTHO05D009211 2.2e-13 81.6 575 28.0
BcaC03g14367 Brassica carinata HOM05D012500 ORTHO05D009211 3.7e-13 80.9 288 30.6
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 6.4e-13 80.1 56 78.6
BolC2t07910H Brassica oleracea HOM05D012500 ORTHO05D009211 8.3e-13 79.7 289 31.1
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 1.1e-12 79.3 424 26.2
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 1.1e-12 79.3 579 29.7
A02p10690 Brassica napus HOM05D012500 ORTHO05D009211 2.4e-12 78.2 286 32.5
CDE05G2993 Ceratophyllum demersum HOM05D007892 ORTHO05D009211 3.2e-12 77.8 124 46.0
C02p17810 Brassica napus HOM05D012500 ORTHO05D009211 3.5e-11 74.3 285 29.5
BraA02t06132Z Brassica rapa HOM05D012500 ORTHO05D009211 3.5e-11 74.3 286 32.2
Carub.0008s1424 Capsella rubella HOM05D012500 ORTHO05D009211 2.3e-10 71.6 305 28.5
AT5G53930 Arabidopsis thaliana HOM05D012500 ORTHO05D009211 2.5e-09 68.2 467 27.0
Peaxi162Scf00069g01735 Petunia axillaris HOM05D021138 ORTHO05D009211 1.2e-08 65.9 471 28.5
Sp6g16010 Schrenkiella parvula HOM05D012500 ORTHO05D009211 2.8e-08 64.7 481 27.7
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 1.5e-06 58.9 694 26.8
Nitab4.5_0005017g0030 Nicotiana tabacum HOM05D021138 ORTHO05D009211 3.4e-06 57.8 552 27.0
AL8G29040 Arabidopsis lyrata HOM05D012500 ORTHO05D009211 9.9e-06 56.2 453 26.0
Os07g0107900 Oryza sativa ssp. japonica HOM05D061528 ORTHO05D009211 9.9e-06 56.2 432 25.5


User provided reference genes

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