Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 8.1e-146 520.4 263 100.0
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 6.2e-138 494.2 262 95.8
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 6.4e-135 484.2 262 95.0
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 1.9e-131 472.6 263 93.2
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 1.2e-117 426.8 262 84.0
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 8.3e-74 281.2 283 58.7
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 9.2e-57 224.6 283 51.2
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 4.7e-53 212.2 263 47.9
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 1.9e-46 190.3 285 44.2
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 1.9e-46 190.3 285 46.0
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 4.0e-44 182.6 295 41.7
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 9.9e-43 177.9 287 43.6
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.3e-42 177.6 208 49.0
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 3.7e-42 176.0 208 49.0
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 3.7e-42 176.0 287 42.2
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 4.9e-42 175.6 266 44.7
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 8.3e-42 174.9 266 42.9
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.4e-41 174.1 276 43.5
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.4e-41 174.1 276 43.5
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.9e-41 173.7 271 42.1
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 5.4e-41 172.2 260 45.0
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 7.1e-41 171.8 280 43.9
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.0e-39 167.9 250 43.6
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 3.0e-39 166.4 215 49.8
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 3.9e-39 166.0 270 42.2
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 6.6e-39 165.2 294 42.5
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.9e-38 163.7 288 41.3
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 3.3e-38 162.9 270 42.2
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 4.3e-38 162.5 259 42.1
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 9.5e-38 161.4 282 40.4
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 2.1e-37 160.2 265 41.1
FvH4_5g03070 Fragaria vesca HOM05D012998 ORTHO05D007556 1.8e-36 157.1 86 90.7
FvH4_6g06532 Fragaria vesca HOM05D012998 ORTHO05D025560 1.8e-36 157.1 86 90.7
FAN07G1843 Fragaria x ananassa HOM05D012998 ORTHO05D025560 5.2e-36 155.6 86 89.5
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 6.8e-36 155.2 273 39.2
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 8.9e-36 154.8 268 40.3
FAN13G1116 Fragaria x ananassa HOM05D012998 ORTHO05D025560 1.2e-35 154.5 86 88.4
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 2.0e-35 153.7 253 42.3
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 9.9e-35 151.4 295 40.0
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 9.9e-35 151.4 273 41.0
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 1.3e-34 151.0 279 40.5
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 2.2e-34 150.2 271 41.7
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 6.4e-34 148.7 254 42.1
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.9e-33 147.1 258 41.1
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 1.9e-33 147.1 282 41.1
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 2.4e-33 146.7 253 42.7
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 4.1e-33 146.0 274 40.9
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 5.4e-33 145.6 274 40.5
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 1.2e-32 144.4 272 39.3
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 1.6e-32 144.1 277 38.3
FAN04G2282 Fragaria x ananassa HOM05D012998 ORTHO05D025560 2.7e-32 143.3 86 84.9
FAN02G3419 Fragaria x ananassa HOM05D012998 ORTHO05D025560 6.0e-32 142.1 86 84.9
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.0e-31 141.4 207 46.4
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 2.3e-31 140.2 291 39.5
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 3.9e-31 139.4 274 40.5
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 3.9e-31 139.4 276 39.9
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 5.1e-31 139.0 290 38.3
FAN22G0421 Fragaria x ananassa HOM05D012998 ORTHO05D007556 4.3e-30 136.0 86 80.2
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 5.6e-30 135.6 228 39.9
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 7.3e-30 135.2 264 43.9
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 7.3e-30 135.2 296 37.2
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 9.6e-30 134.8 265 39.2
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 1.2e-29 134.4 272 41.2
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 1.2e-29 134.4 277 36.8
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 2.8e-29 133.3 281 39.9
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 2.8e-29 133.3 270 39.6
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 3.6e-29 132.9 272 41.9
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 6.2e-29 132.1 156 46.8
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 1.8e-28 130.6 288 38.5
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 3.1e-28 129.8 271 38.4
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 5.2e-28 129.0 283 39.6
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 5.8e-27 125.6 271 36.5
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 2.2e-26 123.6 258 38.0
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 8.4e-26 121.7 284 37.3
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.1e-25 121.3 338 31.7
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 1.2e-24 117.9 267 37.5
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 1.2e-24 117.9 258 36.4
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 1.6e-24 117.5 296 33.8
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.6e-24 117.5 292 37.3
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 2.7e-24 116.7 258 34.5
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 4.6e-24 115.9 242 38.8
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 6.0e-24 115.5 148 44.6
FAN18G1394 Fragaria x ananassa HOM05D012998 ORTHO05D007556 2.3e-23 113.6 77 74.0
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 5.1e-23 112.5 264 37.1
FAN09G1475 Fragaria x ananassa HOM05D012998 ORTHO05D007556 5.1e-23 112.5 65 86.2
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 6.6e-23 112.1 240 37.9
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.9e-22 110.5 272 34.6
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 3.3e-22 109.8 243 35.8
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 7.3e-22 108.6 304 34.5
FvH4_1g28411 Fragaria vesca HOM05D012998 ORTHO05D000014 2.1e-21 107.1 61 88.5
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.4e-20 104.4 355 29.6
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 9.0e-20 101.7 282 32.6
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 3.4e-19 99.8 217 39.6
FAN13G0601 Fragaria x ananassa HOM05D000335 ORTHO05D007556 3.4e-19 99.8 79 63.3
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 4.5e-19 99.4 173 39.3
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 4.5e-19 99.4 160 40.6
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 7.6e-19 98.6 152 42.1
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 1.7e-18 97.4 265 36.6
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 2.9e-18 96.7 299 31.1
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 3.8e-18 96.3 295 32.9
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 4.9e-18 95.9 284 33.8
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 3.2e-17 93.2 155 42.6
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 4.2e-17 92.8 282 33.7
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 5.4e-17 92.4 157 40.1
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 7.1e-17 92.0 226 33.2
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 1.2e-16 91.3 120 44.2
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 3.5e-16 89.7 338 29.9
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 6.0e-16 89.0 173 41.0
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 1.1e-14 84.7 271 30.6
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 1.9e-14 84.0 261 36.4
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 3.3e-14 83.2 248 36.3
FAN16G2204 Fragaria x ananassa HOM05D012998 ORTHO05D007556 3.3e-14 83.2 41 97.6
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 4.3e-14 82.8 366 29.2
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 4.3e-14 82.8 366 29.2
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 1.6e-13 80.9 118 42.4
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 3.7e-13 79.7 281 31.0
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.5e-11 74.3 368 29.3
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 1.9e-09 67.4 227 29.5
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 1.9e-06 57.4 227 29.1
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 3.3e-06 56.6 132 37.1


User provided reference genes

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